Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025608

Identifier: 54025608

GI number: 54025608

Start: 3849487

End: 3850710

Strand: Reverse

Name: 54025608

Synonym: nfa36380

Alternate gene names: NA

Gene position: 3850710-3849487 (Counterclockwise)

Preceding gene: 54025610

Following gene: 54025603

Centisome position: 63.95

GC content: 71.57

Gene sequence:

>1224_bases
ATGAGCAAGTTGCACGTGCTGGTCAGCGGCGGTGGCATCGCCGGGAACGCGATGGCGCTGGCATTGATTCGCTCCGGAAT
CCGGACCACCGTCGTGGAGCGGGCCGCCGCGCCGCGGCCGGGCGGGCAGGCGGTGGACCTGCGCGGACCCAGCCGCGAGG
TGGCCGAGCGGATGGGATTGATGCCGGGCATCACCCGCCACCGCATCGATGAGCGGGGGATGTCCTACGTGGATGGACGC
GGGCGCGCCTGGGTGCGGATGCCTGTGGCGATGTTCGAGGGCAAGGGGCCGATCGCCGAGATCGAGATCACCCGCGGCGA
TCTCAACCGGGTACTGCTGGACGCGCTGGCCGCGGCTCCCGGCCGACTCGACTACCGCTACGGCGAGTCGATCGACACAC
TGCGTCCCGACGACGCCGGGGTGACGGTCGGCTTCACCTCCGGCGCCACCGGGCGCTTCGACCTGGTCATCGGCGCCGAC
GGCGTGCACTCGGCCACCAGGCGCCTGGCGTTCGGCCCGGAGGAGAACTACAAGACCTACCTCGGTGGCTACACCTCGTA
CTTCACCCTGCCCACCCCCGCCGGCGTCGAACCCGGCTGGCTGGCGATGCACACGGTGCCGGGGGCGGCGCTGGGCATTC
GCCCCGATGCCGAGCCGGGCACCGCGAAAGCCGTGATCATGCTGCGCACGGCGGCCGATCCGGCATTGCGCGGCGACGTG
ACCGCCCAGCAGCAGCTCATCCGCCGCATGTTGCACGGCGCGGGCTGGCTGACACCGACCGTGCTCGACGCGATGGACAC
GGCGTCCGACTTCTACTTCGACGAGCTGGCCCGCATCGATATGCCGAGCCTGTCCACCGGACGGGTCGTGCTGCTCGGCG
ACGCGGGCTACTGCGGCTCACCGCTGTCGGGCATGGGAACCGCGATGGCACTGGTCGGCGCCTACCTGCTCGCCGGGGAA
CTCGCGGCCGATCCGGACGATCCGATGGGCGGGCTCGCGCGCTACGAGGCGCGGGTCACGCCGTTCCTGGACAAGGCCAA
GGAGCTGCCGGGCGGTGGGCTGGCGATGATGGTGCCCACCACCCGGGCCGGCGTGGCGCTCACCCGCCTGGTGACCCGGG
CGATGGTCGCGCGGCCCTTCCGCCCACTGCTGCTCGCCATGATGAGCGGCACCGACGACTACGAACTGCCCTCGTACGCC
ACCGATTCCGCGGACCGGCGGTGA

Upstream 100 bases:

>100_bases
CCGCAGGTTAGCAGCGTCTCAGACATTTGTACTAGACGAATGTGTCACCCTCTGTTAGACATTTGTCTTACACAAACGTT
CAAGCAGGGAAGTGATCGTG

Downstream 100 bases:

>100_bases
GCGCCGCTCAGAGCAGGATCGCGCCGCCGCTGGGGCTCTCCTCGCGGGCGATGGCCGAGTAGGCGGCCGCCAGCAGGGAC
GGATCGGGGCCCTCCAGCCG

Product: putative monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSKLHVLVSGGGIAGNAMALALIRSGIRTTVVERAAAPRPGGQAVDLRGPSREVAERMGLMPGITRHRIDERGMSYVDGR
GRAWVRMPVAMFEGKGPIAEIEITRGDLNRVLLDALAAAPGRLDYRYGESIDTLRPDDAGVTVGFTSGATGRFDLVIGAD
GVHSATRRLAFGPEENYKTYLGGYTSYFTLPTPAGVEPGWLAMHTVPGAALGIRPDAEPGTAKAVIMLRTAADPALRGDV
TAQQQLIRRMLHGAGWLTPTVLDAMDTASDFYFDELARIDMPSLSTGRVVLLGDAGYCGSPLSGMGTAMALVGAYLLAGE
LAADPDDPMGGLARYEARVTPFLDKAKELPGGGLAMMVPTTRAGVALTRLVTRAMVARPFRPLLLAMMSGTDDYELPSYA
TDSADRR

Sequences:

>Translated_407_residues
MSKLHVLVSGGGIAGNAMALALIRSGIRTTVVERAAAPRPGGQAVDLRGPSREVAERMGLMPGITRHRIDERGMSYVDGR
GRAWVRMPVAMFEGKGPIAEIEITRGDLNRVLLDALAAAPGRLDYRYGESIDTLRPDDAGVTVGFTSGATGRFDLVIGAD
GVHSATRRLAFGPEENYKTYLGGYTSYFTLPTPAGVEPGWLAMHTVPGAALGIRPDAEPGTAKAVIMLRTAADPALRGDV
TAQQQLIRRMLHGAGWLTPTVLDAMDTASDFYFDELARIDMPSLSTGRVVLLGDAGYCGSPLSGMGTAMALVGAYLLAGE
LAADPDDPMGGLARYEARVTPFLDKAKELPGGGLAMMVPTTRAGVALTRLVTRAMVARPFRPLLLAMMSGTDDYELPSYA
TDSADRR
>Mature_406_residues
SKLHVLVSGGGIAGNAMALALIRSGIRTTVVERAAAPRPGGQAVDLRGPSREVAERMGLMPGITRHRIDERGMSYVDGRG
RAWVRMPVAMFEGKGPIAEIEITRGDLNRVLLDALAAAPGRLDYRYGESIDTLRPDDAGVTVGFTSGATGRFDLVIGADG
VHSATRRLAFGPEENYKTYLGGYTSYFTLPTPAGVEPGWLAMHTVPGAALGIRPDAEPGTAKAVIMLRTAADPALRGDVT
AQQQLIRRMLHGAGWLTPTVLDAMDTASDFYFDELARIDMPSLSTGRVVLLGDAGYCGSPLSGMGTAMALVGAYLLAGEL
AADPDDPMGGLARYEARVTPFLDKAKELPGGGLAMMVPTTRAGVALTRLVTRAMVARPFRPLLLAMMSGTDDYELPSYAT
DSADRR

Specific function: Unknown

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 43108; Mature: 42977

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLHVLVSGGGIAGNAMALALIRSGIRTTVVERAAAPRPGGQAVDLRGPSREVAERMGL
CCCEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHCC
MPGITRHRIDERGMSYVDGRGRAWVRMPVAMFEGKGPIAEIEITRGDLNRVLLDALAAAP
CCCHHHHHHHHCCCCEECCCCCEEEEEEHHEECCCCCEEEEEEEHHHHHHHHHHHHHCCC
GRLDYRYGESIDTLRPDDAGVTVGFTSGATGRFDLVIGADGVHSATRRLAFGPEENYKTY
CCCEECCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHH
LGGYTSYFTLPTPAGVEPGWLAMHTVPGAALGIRPDAEPGTAKAVIMLRTAADPALRGDV
CCCCEEEEECCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCEEEEEEEECCCCCCCCCC
TAQQQLIRRMLHGAGWLTPTVLDAMDTASDFYFDELARIDMPSLSTGRVVLLGDAGYCGS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
PLSGMGTAMALVGAYLLAGELAADPDDPMGGLARYEARVTPFLDKAKELPGGGLAMMVPT
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCEEEEECC
TRAGVALTRLVTRAMVARPFRPLLLAMMSGTDDYELPSYATDSADRR
CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKLHVLVSGGGIAGNAMALALIRSGIRTTVVERAAAPRPGGQAVDLRGPSREVAERMGL
CCEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHCC
MPGITRHRIDERGMSYVDGRGRAWVRMPVAMFEGKGPIAEIEITRGDLNRVLLDALAAAP
CCCHHHHHHHHCCCCEECCCCCEEEEEEHHEECCCCCEEEEEEEHHHHHHHHHHHHHCCC
GRLDYRYGESIDTLRPDDAGVTVGFTSGATGRFDLVIGADGVHSATRRLAFGPEENYKTY
CCCEECCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHH
LGGYTSYFTLPTPAGVEPGWLAMHTVPGAALGIRPDAEPGTAKAVIMLRTAADPALRGDV
CCCCEEEEECCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCEEEEEEEECCCCCCCCCC
TAQQQLIRRMLHGAGWLTPTVLDAMDTASDFYFDELARIDMPSLSTGRVVLLGDAGYCGS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
PLSGMGTAMALVGAYLLAGELAADPDDPMGGLARYEARVTPFLDKAKELPGGGLAMMVPT
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCEEEEECC
TRAGVALTRLVTRAMVARPFRPLLLAMMSGTDDYELPSYATDSADRR
CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]