| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
Click here to switch to the map view.
The map label for this gene is secG [H]
Identifier: 54025554
GI number: 54025554
Start: 3794756
End: 3794989
Strand: Reverse
Name: secG [H]
Synonym: nfa35840
Alternate gene names: 54025554
Gene position: 3794989-3794756 (Counterclockwise)
Preceding gene: 54025555
Following gene: 54025551
Centisome position: 63.03
GC content: 62.39
Gene sequence:
>234_bases ATGCGGATGTTCCTGGATATCCTCCTGATCATCACCAGCGTGCTGCTGGTGCTGCTGGTGCTGCTGCACCGCGCCAAGGG TGGGGGTCTGTCCAGCCTGTTCGGTGGCGGCGTGCAGTCCAGCCTGTCCGGCTCCACCGTCGTCGAGAAGAACCTCGACC GCGTCACGATCTTCACCGGCATCATCTGGCTCATCGCCATCCTCGGCATCGGCCTGGAGATCAAGTTCTCCTGA
Upstream 100 bases:
>100_bases ACCCAGCATCAGCCACCTGGTGGCGGTCGACCCGCAGCGGCGATGAGCCCGCCGCACGCCCGATTGGGGCGCGCGGCGGC GCACCCCATAGACTGACGGC
Downstream 100 bases:
>100_bases TCCCGGCCTCGTCCCGGCCGGTCCACGGCGCGGTGGCCTCGAAGCGCACCAGCCCGGTCGCGTCCGCTTCGGCTCGGGTG CGCACCATGTCCAGCCGCTC
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MRMFLDILLIITSVLLVLLVLLHRAKGGGLSSLFGGGVQSSLSGSTVVEKNLDRVTIFTGIIWLIAILGIGLEIKFS
Sequences:
>Translated_77_residues MRMFLDILLIITSVLLVLLVLLHRAKGGGLSSLFGGGVQSSLSGSTVVEKNLDRVTIFTGIIWLIAILGIGLEIKFS >Mature_77_residues MRMFLDILLIITSVLLVLLVLLHRAKGGGLSSLFGGGVQSSLSGSTVVEKNLDRVTIFTGIIWLIAILGIGLEIKFS
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 8226; Mature: 8226
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMFLDILLIITSVLLVLLVLLHRAKGGGLSSLFGGGVQSSLSGSTVVEKNLDRVTIFTG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHH IIWLIAILGIGLEIKFS HHHHHHHHCCCCEEEEC >Mature Secondary Structure MRMFLDILLIITSVLLVLLVLLHRAKGGGLSSLFGGGVQSSLSGSTVVEKNLDRVTIFTG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHH IIWLIAILGIGLEIKFS HHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]