Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is phnX [H]

Identifier: 54025501

GI number: 54025501

Start: 3743481

End: 3744158

Strand: Reverse

Name: phnX [H]

Synonym: nfa35310

Alternate gene names: 54025501

Gene position: 3744158-3743481 (Counterclockwise)

Preceding gene: 54025509

Following gene: 54025500

Centisome position: 62.18

GC content: 75.22

Gene sequence:

>678_bases
ATGACCGATATCGCTCTGGCCGTGCTGGACATGGCCGGCACCACCGTCACCGACGACGGCCTCGTCACGCGCGCCTTCGA
GGAAGCCGCCACGGCCGCGGGCCTGCCGCCGGAGGGCGCGGAACGCGAGAACGCGCGCCGCTACGTGCTCGACACCATGG
GCCAGTCGAAGATCGCGGTGTTCCGCGCGCTGTTCGCCGACGAGGAGCGCGCCCGGCGCGCCAATGCCGCGTTCGAGGCC
GCCTACGCCCGATTCGTCGAGGACGGCGGCGTGCAGGCCCTGCCCGGCGCGGCGGAGACGATCGCCGCGCTGCGCGACGG
GGGGCTCACCGTCGCCTTGACCACCGGTTTCAGCTCCGCCACCCAGGACCGGATCCTCGACGTCCTGGGCTGGCGCGCCC
TCGCCGACTTCGCCCTCGCCCCACCGGATGCCGGTCGCGGCAGGCCCATGCCCGACCTGGTGCTGGCGGCGGTCCTGCGC
GCCGGGGTCGACGACGTGCGCCGTGTCGCCGTGGCCGGTGACACCGCCGGTGACATCGAATCCGGCCGCCGCGCCGGCGC
CACCATCCTGGCCGGCACGTTGACCGGCGCCCACGACGCGGACACGCTGCGCCGCGCCGGGGCCACCCACGTGCTCGACT
CCGTCGCCGAACTGCCCGCCCTGTTGCTGCCCGCCTGA

Upstream 100 bases:

>100_bases
CGGATGGTCTATACCAATCGCCATCGTGGGGTGCGGCGCCGGCGGACCCGTGGCCGACCGGCGCCGAACTTCCGTTCACC
CCTTACGGACTGGGACTCAG

Downstream 100 bases:

>100_bases
AACCTCTCCCACCGCAAGGAACTTCGCATGAACATCCGCCGCTCCCGCCCGCTCGTCTCGCTGCTGGCCGGATTCGCCCT
CGCGCTGACGGCCTGTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphonatase; Phosphonoacetaldehyde phosphonohydrolase [H]

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTDIALAVLDMAGTTVTDDGLVTRAFEEAATAAGLPPEGAERENARRYVLDTMGQSKIAVFRALFADEERARRANAAFEA
AYARFVEDGGVQALPGAAETIAALRDGGLTVALTTGFSSATQDRILDVLGWRALADFALAPPDAGRGRPMPDLVLAAVLR
AGVDDVRRVAVAGDTAGDIESGRRAGATILAGTLTGAHDADTLRRAGATHVLDSVAELPALLLPA

Sequences:

>Translated_225_residues
MTDIALAVLDMAGTTVTDDGLVTRAFEEAATAAGLPPEGAERENARRYVLDTMGQSKIAVFRALFADEERARRANAAFEA
AYARFVEDGGVQALPGAAETIAALRDGGLTVALTTGFSSATQDRILDVLGWRALADFALAPPDAGRGRPMPDLVLAAVLR
AGVDDVRRVAVAGDTAGDIESGRRAGATILAGTLTGAHDADTLRRAGATHVLDSVAELPALLLPA
>Mature_224_residues
TDIALAVLDMAGTTVTDDGLVTRAFEEAATAAGLPPEGAERENARRYVLDTMGQSKIAVFRALFADEERARRANAAFEAA
YARFVEDGGVQALPGAAETIAALRDGGLTVALTTGFSSATQDRILDVLGWRALADFALAPPDAGRGRPMPDLVLAAVLRA
GVDDVRRVAVAGDTAGDIESGRRAGATILAGTLTGAHDADTLRRAGATHVLDSVAELPALLLPA

Specific function: Involved in phosphonate degradation [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. PhnX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR006323 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.11.1.1 [H]

Molecular weight: Translated: 23221; Mature: 23090

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIALAVLDMAGTTVTDDGLVTRAFEEAATAAGLPPEGAERENARRYVLDTMGQSKIAV
CCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHH
FRALFADEERARRANAAFEAAYARFVEDGGVQALPGAAETIAALRDGGLTVALTTGFSSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHH
TQDRILDVLGWRALADFALAPPDAGRGRPMPDLVLAAVLRAGVDDVRRVAVAGDTAGDIE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHH
SGRRAGATILAGTLTGAHDADTLRRAGATHVLDSVAELPALLLPA
CCHHCCCEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDIALAVLDMAGTTVTDDGLVTRAFEEAATAAGLPPEGAERENARRYVLDTMGQSKIAV
CHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHH
FRALFADEERARRANAAFEAAYARFVEDGGVQALPGAAETIAALRDGGLTVALTTGFSSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHH
TQDRILDVLGWRALADFALAPPDAGRGRPMPDLVLAAVLRAGVDDVRRVAVAGDTAGDIE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHH
SGRRAGATILAGTLTGAHDADTLRRAGATHVLDSVAELPALLLPA
CCHHCCCEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]