| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is phnX [H]
Identifier: 54025501
GI number: 54025501
Start: 3743481
End: 3744158
Strand: Reverse
Name: phnX [H]
Synonym: nfa35310
Alternate gene names: 54025501
Gene position: 3744158-3743481 (Counterclockwise)
Preceding gene: 54025509
Following gene: 54025500
Centisome position: 62.18
GC content: 75.22
Gene sequence:
>678_bases ATGACCGATATCGCTCTGGCCGTGCTGGACATGGCCGGCACCACCGTCACCGACGACGGCCTCGTCACGCGCGCCTTCGA GGAAGCCGCCACGGCCGCGGGCCTGCCGCCGGAGGGCGCGGAACGCGAGAACGCGCGCCGCTACGTGCTCGACACCATGG GCCAGTCGAAGATCGCGGTGTTCCGCGCGCTGTTCGCCGACGAGGAGCGCGCCCGGCGCGCCAATGCCGCGTTCGAGGCC GCCTACGCCCGATTCGTCGAGGACGGCGGCGTGCAGGCCCTGCCCGGCGCGGCGGAGACGATCGCCGCGCTGCGCGACGG GGGGCTCACCGTCGCCTTGACCACCGGTTTCAGCTCCGCCACCCAGGACCGGATCCTCGACGTCCTGGGCTGGCGCGCCC TCGCCGACTTCGCCCTCGCCCCACCGGATGCCGGTCGCGGCAGGCCCATGCCCGACCTGGTGCTGGCGGCGGTCCTGCGC GCCGGGGTCGACGACGTGCGCCGTGTCGCCGTGGCCGGTGACACCGCCGGTGACATCGAATCCGGCCGCCGCGCCGGCGC CACCATCCTGGCCGGCACGTTGACCGGCGCCCACGACGCGGACACGCTGCGCCGCGCCGGGGCCACCCACGTGCTCGACT CCGTCGCCGAACTGCCCGCCCTGTTGCTGCCCGCCTGA
Upstream 100 bases:
>100_bases CGGATGGTCTATACCAATCGCCATCGTGGGGTGCGGCGCCGGCGGACCCGTGGCCGACCGGCGCCGAACTTCCGTTCACC CCTTACGGACTGGGACTCAG
Downstream 100 bases:
>100_bases AACCTCTCCCACCGCAAGGAACTTCGCATGAACATCCGCCGCTCCCGCCCGCTCGTCTCGCTGCTGGCCGGATTCGCCCT CGCGCTGACGGCCTGTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphonatase; Phosphonoacetaldehyde phosphonohydrolase [H]
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTDIALAVLDMAGTTVTDDGLVTRAFEEAATAAGLPPEGAERENARRYVLDTMGQSKIAVFRALFADEERARRANAAFEA AYARFVEDGGVQALPGAAETIAALRDGGLTVALTTGFSSATQDRILDVLGWRALADFALAPPDAGRGRPMPDLVLAAVLR AGVDDVRRVAVAGDTAGDIESGRRAGATILAGTLTGAHDADTLRRAGATHVLDSVAELPALLLPA
Sequences:
>Translated_225_residues MTDIALAVLDMAGTTVTDDGLVTRAFEEAATAAGLPPEGAERENARRYVLDTMGQSKIAVFRALFADEERARRANAAFEA AYARFVEDGGVQALPGAAETIAALRDGGLTVALTTGFSSATQDRILDVLGWRALADFALAPPDAGRGRPMPDLVLAAVLR AGVDDVRRVAVAGDTAGDIESGRRAGATILAGTLTGAHDADTLRRAGATHVLDSVAELPALLLPA >Mature_224_residues TDIALAVLDMAGTTVTDDGLVTRAFEEAATAAGLPPEGAERENARRYVLDTMGQSKIAVFRALFADEERARRANAAFEAA YARFVEDGGVQALPGAAETIAALRDGGLTVALTTGFSSATQDRILDVLGWRALADFALAPPDAGRGRPMPDLVLAAVLRA GVDDVRRVAVAGDTAGDIESGRRAGATILAGTLTGAHDADTLRRAGATHVLDSVAELPALLLPA
Specific function: Involved in phosphonate degradation [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PhnX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR006323 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.11.1.1 [H]
Molecular weight: Translated: 23221; Mature: 23090
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIALAVLDMAGTTVTDDGLVTRAFEEAATAAGLPPEGAERENARRYVLDTMGQSKIAV CCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHH FRALFADEERARRANAAFEAAYARFVEDGGVQALPGAAETIAALRDGGLTVALTTGFSSA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHH TQDRILDVLGWRALADFALAPPDAGRGRPMPDLVLAAVLRAGVDDVRRVAVAGDTAGDIE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHH SGRRAGATILAGTLTGAHDADTLRRAGATHVLDSVAELPALLLPA CCHHCCCEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDIALAVLDMAGTTVTDDGLVTRAFEEAATAAGLPPEGAERENARRYVLDTMGQSKIAV CHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHH FRALFADEERARRANAAFEAAYARFVEDGGVQALPGAAETIAALRDGGLTVALTTGFSSA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHH TQDRILDVLGWRALADFALAPPDAGRGRPMPDLVLAAVLRAGVDDVRRVAVAGDTAGDIE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHH SGRRAGATILAGTLTGAHDADTLRRAGATHVLDSVAELPALLLPA CCHHCCCEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]