| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is CYP133B2 [H]
Identifier: 54025469
GI number: 54025469
Start: 3710749
End: 3711942
Strand: Reverse
Name: CYP133B2 [H]
Synonym: nfa34990
Alternate gene names: 54025469
Gene position: 3711942-3710749 (Counterclockwise)
Preceding gene: 54025473
Following gene: 54025467
Centisome position: 61.65
GC content: 72.19
Gene sequence:
>1194_bases ATGTCAACACCGACCAGCCTCGACGGTCTCGATTTCGCCTTCCACGACCTACCGGACCTGCATGCCACCCTCGCCGACCT GCGCCGCCGCGCACCCTGGGCGACGGTGCCGTTCGCGGGCTCGCGCGCGATCCTGCTGCTGACGCACGACCTGGTCGCGG CCGCCTTCAAGGACGAGGTCACCTTCCCCGCCGCGGTCACCTACCGGCTCACCACCGGACCCGTGCTCGGGCACACCCTG CAATGCATGCAGGGCAGGGAGCACCGCATCGCCCGCGGCATCGCCACCCCGCCGTTGCGCCGCGCCAAGGTAGCCGCACT GGTCGAGCCGCTGCTCGAGCCGCTCGCGCACGAGCTGATCGACGACTTCGCCGACCGGGGCACCGCCGATCTGGTCGCCG AATTCACCACCCGCTACCCGGTACTGGTGATCAGCAGACTGCTCGGCCTGCCGAACGCCGACGAGGCGACCGTGCACCGC TGGGCACGCGATCTGTTCCACTTCCCGCTCGACCCCGACGCCGCACGGCGCGCCTCCCGCGAATTCACCGCCTACGTCAC GCCGGTTCTCGCTGAGCGCAGACGTGCCCCGGGCGACGACCTGATCTCGCTGCTGGTCACCACCTCGGCGGAGGGGGAGC ACCTCACCGACGAACAGGTGCTCTCGTTCCTGCGCCTGCTGTTCCCGGCCGGTGCCGACACCACGATGCTCGGGCTCGGC AACATCCTCTCGGCGCTGCTCACCCACCCCGAGCAGCTGGCCAGGGTCGCCGCCGACCCGGACGAATGGGTGCGGTGGGC GGTCTGGGAGGGGCTGCGATGGGAGCCCCCGGTCGGCCTGCTGCCGCGCGCCTGCCCGGAAGCCGTTGAGTGGCACGGCA TCTCGATCCCGGCGGGCACGCCGATGATCTTCGCGATCACCGCCGCACACCGCGACCCCGGCCACTACCCCGACCCGGAT CGGTTCGACATCACCCGGCAGGCGACGGCGATGCTCTCGTTCGGGCAGGGCCCGCACAGCTGCCCCGGCAACTGGCTCGC CCTCGCGGAACTCACCACCGCGCTCGGCGCGTTGCTGGCGCGCCTGCCCGGACTCCGCCTGCGGCCCGGCGCCGCCGACC GGGCCCGGGTGACCAGTCAGGTCGGCACGGCGTTGCGCGGACCGAACGCGCTGGCCGTCGAATGGGACCGCTGA
Upstream 100 bases:
>100_bases CGACACCGACTCGGTCTTGTCAGCGGCCATCCGTCCTCTTACAGTCGGCAGTACAGTTATTCGCATCCACCAGTGCGGAT ATTCGCATCAGGAGTTGCCG
Downstream 100 bases:
>100_bases GTATTCAGCCCTGCGGCTGGAACCGCACCCGCACCGAGACGCCGCCGCGCTCGTCCTTGGTGGCGACGGCGTGCCCGCGC CGGTCGATGCCGTTGATGTG
Product: cytochrome P450 monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSTPTSLDGLDFAFHDLPDLHATLADLRRRAPWATVPFAGSRAILLLTHDLVAAAFKDEVTFPAAVTYRLTTGPVLGHTL QCMQGREHRIARGIATPPLRRAKVAALVEPLLEPLAHELIDDFADRGTADLVAEFTTRYPVLVISRLLGLPNADEATVHR WARDLFHFPLDPDAARRASREFTAYVTPVLAERRRAPGDDLISLLVTTSAEGEHLTDEQVLSFLRLLFPAGADTTMLGLG NILSALLTHPEQLARVAADPDEWVRWAVWEGLRWEPPVGLLPRACPEAVEWHGISIPAGTPMIFAITAAHRDPGHYPDPD RFDITRQATAMLSFGQGPHSCPGNWLALAELTTALGALLARLPGLRLRPGAADRARVTSQVGTALRGPNALAVEWDR
Sequences:
>Translated_397_residues MSTPTSLDGLDFAFHDLPDLHATLADLRRRAPWATVPFAGSRAILLLTHDLVAAAFKDEVTFPAAVTYRLTTGPVLGHTL QCMQGREHRIARGIATPPLRRAKVAALVEPLLEPLAHELIDDFADRGTADLVAEFTTRYPVLVISRLLGLPNADEATVHR WARDLFHFPLDPDAARRASREFTAYVTPVLAERRRAPGDDLISLLVTTSAEGEHLTDEQVLSFLRLLFPAGADTTMLGLG NILSALLTHPEQLARVAADPDEWVRWAVWEGLRWEPPVGLLPRACPEAVEWHGISIPAGTPMIFAITAAHRDPGHYPDPD RFDITRQATAMLSFGQGPHSCPGNWLALAELTTALGALLARLPGLRLRPGAADRARVTSQVGTALRGPNALAVEWDR >Mature_396_residues STPTSLDGLDFAFHDLPDLHATLADLRRRAPWATVPFAGSRAILLLTHDLVAAAFKDEVTFPAAVTYRLTTGPVLGHTLQ CMQGREHRIARGIATPPLRRAKVAALVEPLLEPLAHELIDDFADRGTADLVAEFTTRYPVLVISRLLGLPNADEATVHRW ARDLFHFPLDPDAARRASREFTAYVTPVLAERRRAPGDDLISLLVTTSAEGEHLTDEQVLSFLRLLFPAGADTTMLGLGN ILSALLTHPEQLARVAADPDEWVRWAVWEGLRWEPPVGLLPRACPEAVEWHGISIPAGTPMIFAITAAHRDPGHYPDPDR FDITRQATAMLSFGQGPHSCPGNWLALAELTTALGALLARLPGLRLRPGAADRARVTSQVGTALRGPNALAVEWDR
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI119220562, Length=245, Percent_Identity=27.7551020408163, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI158138530, Length=293, Percent_Identity=25.5972696245734, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI13435391, Length=245, Percent_Identity=26.9387755102041, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI150036266, Length=242, Percent_Identity=26.8595041322314, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI6005737, Length=248, Percent_Identity=27.0161290322581, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24642101, Length=189, Percent_Identity=30.1587301587302, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI17933518, Length=207, Percent_Identity=26.5700483091787, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 43343; Mature: 43212
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPTSLDGLDFAFHDLPDLHATLADLRRRAPWATVPFAGSRAILLLTHDLVAAAFKDEV CCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCC TFPAAVTYRLTTGPVLGHTLQCMQGREHRIARGIATPPLRRAKVAALVEPLLEPLAHELI CCCEEEEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH DDFADRGTADLVAEFTTRYPVLVISRLLGLPNADEATVHRWARDLFHFPLDPDAARRASR HHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH EFTAYVTPVLAERRRAPGDDLISLLVTTSAEGEHLTDEQVLSFLRLLFPAGADTTMLGLG HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH NILSALLTHPEQLARVAADPDEWVRWAVWEGLRWEPPVGLLPRACPEAVEWHGISIPAGT HHHHHHHHCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCEECCCCC PMIFAITAAHRDPGHYPDPDRFDITRQATAMLSFGQGPHSCPGNWLALAELTTALGALLA CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH RLPGLRLRPGAADRARVTSQVGTALRGPNALAVEWDR HCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure STPTSLDGLDFAFHDLPDLHATLADLRRRAPWATVPFAGSRAILLLTHDLVAAAFKDEV CCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCC TFPAAVTYRLTTGPVLGHTLQCMQGREHRIARGIATPPLRRAKVAALVEPLLEPLAHELI CCCEEEEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH DDFADRGTADLVAEFTTRYPVLVISRLLGLPNADEATVHRWARDLFHFPLDPDAARRASR HHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH EFTAYVTPVLAERRRAPGDDLISLLVTTSAEGEHLTDEQVLSFLRLLFPAGADTTMLGLG HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH NILSALLTHPEQLARVAADPDEWVRWAVWEGLRWEPPVGLLPRACPEAVEWHGISIPAGT HHHHHHHHCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCEECCCCC PMIFAITAAHRDPGHYPDPDRFDITRQATAMLSFGQGPHSCPGNWLALAELTTALGALLA CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH RLPGLRLRPGAADRARVTSQVGTALRGPNALAVEWDR HCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]