| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is corA [C]
Identifier: 54025439
GI number: 54025439
Start: 3678987
End: 3679919
Strand: Reverse
Name: corA [C]
Synonym: nfa34690
Alternate gene names: 54025439
Gene position: 3679919-3678987 (Counterclockwise)
Preceding gene: 54025440
Following gene: 54025437
Centisome position: 61.12
GC content: 73.2
Gene sequence:
>933_bases ATGACGAAATCCCTACGCGCGCCCGCCGATCGGTTCGACACCGAGGTGCTCGGCATGCACTGGATCCCGCTGCCGTCCTC GGACGAGGACACCGCGGCGGTGCTGCGCGAGCGGCTCGGCGTCGATTTCACGACGCTGCGCGACGGGGTCACCGCGCACG GTGATTTCACGTATCTGCCGGTGACCGTGAACTACTGCCGCGGCGAGCGGGTCGAGCGGGAGACCATCGTCTTCGCGCTC GGCACCGAGTTCGTCGTCACGCTGCAACCGGCCGAGCCCTTCCTGCCGTTCGAGACCGCCATCGCGGCCATGCGCCGCGA CGCCACCCTCACCGGTTCCTCCTACGGTGTGACCTTCGCCCTGCTGTGGGCGCTCAACGACGCCTCCGACCGGGTGCTGC GCTGGGTGGGCCGCACCCTCGAGGCGCAGCGCGACATCCTCGACGCCGCCACCGCCGAGCACGGCAACGGGCTGGGCGCC GGGCCTGCCCGCGAGGTGATCTACCGGCTCGGCGCCGCCGAACGGGTCGTCGCCCGGGTGCGCGAGACCCAGGCGCAGCT GGCCGCGGCCGCCCGCCATCTCGACGTCGACTACGCCGCACAGACCAGCGGGCTCGGCGAGCGGATCGGCTCGCTCGTGG CCGACATCGAGGGCGTGGCCCGGCGGGCCGAGCGCGAGCACGACGGCTTGCGTTTCCTGGCCCAGACCGCCACCGCCTGC CTCGGGGTGCGCCAGAGCGGCATCCTGCGGCTGCACACCGGCGTGGTCGCGGTGTTCCTGCCGCCCACCGTGCTGGCCGC CTCCTACGCGGCCGAGTTCACCTGGCTGCCGCGGCTGGACCCGATCCCGGCCCTGTTCGTCTTCGTGGTCGTGACCGCGC TGGCCGCCGCCGTTCCGCTGCACTACCTCGGCCGCGGCGAGCGGCGCACCTAG
Upstream 100 bases:
>100_bases CCGCCGTGAGCACTGCCCGCCTCGAACCCGTGCCCGCCGTCCGCGCGGCGACCCCGTCGCGTCCGCGCATCGCCGTTCCA TCGGTGCGTGGGAGGTCACG
Downstream 100 bases:
>100_bases GAGCGCGGCCCCGCGGCGACTGCGACCGGTTCCGGCGCGGGGTCGACCGGCTGCCACCGGGCATCGACCACCAGGCCCAC CAGGCCGATGCCGAGACACA
Product: hypothetical protein
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: Mg2 Transporter Protein CorA Family Protein; Mg2+ Transporter Protein CorA-Like
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MTKSLRAPADRFDTEVLGMHWIPLPSSDEDTAAVLRERLGVDFTTLRDGVTAHGDFTYLPVTVNYCRGERVERETIVFAL GTEFVVTLQPAEPFLPFETAIAAMRRDATLTGSSYGVTFALLWALNDASDRVLRWVGRTLEAQRDILDAATAEHGNGLGA GPAREVIYRLGAAERVVARVRETQAQLAAAARHLDVDYAAQTSGLGERIGSLVADIEGVARRAEREHDGLRFLAQTATAC LGVRQSGILRLHTGVVAVFLPPTVLAASYAAEFTWLPRLDPIPALFVFVVVTALAAAVPLHYLGRGERRT
Sequences:
>Translated_310_residues MTKSLRAPADRFDTEVLGMHWIPLPSSDEDTAAVLRERLGVDFTTLRDGVTAHGDFTYLPVTVNYCRGERVERETIVFAL GTEFVVTLQPAEPFLPFETAIAAMRRDATLTGSSYGVTFALLWALNDASDRVLRWVGRTLEAQRDILDAATAEHGNGLGA GPAREVIYRLGAAERVVARVRETQAQLAAAARHLDVDYAAQTSGLGERIGSLVADIEGVARRAEREHDGLRFLAQTATAC LGVRQSGILRLHTGVVAVFLPPTVLAASYAAEFTWLPRLDPIPALFVFVVVTALAAAVPLHYLGRGERRT >Mature_309_residues TKSLRAPADRFDTEVLGMHWIPLPSSDEDTAAVLRERLGVDFTTLRDGVTAHGDFTYLPVTVNYCRGERVERETIVFALG TEFVVTLQPAEPFLPFETAIAAMRRDATLTGSSYGVTFALLWALNDASDRVLRWVGRTLEAQRDILDAATAEHGNGLGAG PAREVIYRLGAAERVVARVRETQAQLAAAARHLDVDYAAQTSGLGERIGSLVADIEGVARRAEREHDGLRFLAQTATACL GVRQSGILRLHTGVVAVFLPPTVLAASYAAEFTWLPRLDPIPALFVFVVVTALAAAVPLHYLGRGERRT
Specific function: Plays A Role In The Transport Of Magnesium And Cobalt Ions. [C]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33691; Mature: 33560
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSLRAPADRFDTEVLGMHWIPLPSSDEDTAAVLRERLGVDFTTLRDGVTAHGDFTYLP CCCCCCCCHHHHCCHHHCEEEECCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEE VTVNYCRGERVERETIVFALGTEFVVTLQPAEPFLPFETAIAAMRRDATLTGSSYGVTFA EEEEECCCCCCCCEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHCCCEECCCCCCHHHH LLWALNDASDRVLRWVGRTLEAQRDILDAATAEHGNGLGAGPAREVIYRLGAAERVVARV HEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHH RETQAQLAAAARHLDVDYAAQTSGLGERIGSLVADIEGVARRAEREHDGLRFLAQTATAC HHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVRQSGILRLHTGVVAVFLPPTVLAASYAAEFTWLPRLDPIPALFVFVVVTALAAAVPL HHHHCCCEEEEECCEEEEEECHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH HYLGRGERRT HHHCCCCCCC >Mature Secondary Structure TKSLRAPADRFDTEVLGMHWIPLPSSDEDTAAVLRERLGVDFTTLRDGVTAHGDFTYLP CCCCCCCHHHHCCHHHCEEEECCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEE VTVNYCRGERVERETIVFALGTEFVVTLQPAEPFLPFETAIAAMRRDATLTGSSYGVTFA EEEEECCCCCCCCEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHCCCEECCCCCCHHHH LLWALNDASDRVLRWVGRTLEAQRDILDAATAEHGNGLGAGPAREVIYRLGAAERVVARV HEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHH RETQAQLAAAARHLDVDYAAQTSGLGERIGSLVADIEGVARRAEREHDGLRFLAQTATAC HHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVRQSGILRLHTGVVAVFLPPTVLAASYAAEFTWLPRLDPIPALFVFVVVTALAAAVPL HHHHCCCEEEEECCEEEEEECHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH HYLGRGERRT HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA