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The map label for this gene is 54020580

Identifier: 54020580

GI number: 54020580

Start: 702870

End: 704585

Strand: Reverse

Name: 54020580

Synonym: mhp556

Alternate gene names: NA

Gene position: 704585-702870 (Counterclockwise)

Preceding gene: 54020581

Following gene: 54020579

Centisome position: 78.92

GC content: 29.43

Gene sequence:

>1716_bases
ATGAAAAACAAATTAGTCTATCTTTTTGGCAAATTCGCGGCTTTTATTTGTCTAATTATCCTTTTTTTTATAGCATTTTT
TTTAAAATCACAGTTTGGATTTAAACCCGTTATTTATAATTATGAATCTTATATATCTGATCAAGGACGCGAATTTATTA
ACAAGGATTTTAATTACCGGGAATTTGGAAATATCAGTGAATTTACAAAAGCAATCGAGGATAATCGGACAATTGCAGGT
GTTGGTTCAGACTTTCAAATTGCTCGTTTGGCACAAAAAGGACTTTTGCAAAAAATTGACTATTCAAAACTTTTTCCAAA
TTGAGATTTGGTAAAAGTTTTTAGAAAACCAGAAAATTACCAAAATTTATCTTTAAAAGAAAAACAGGAATTTATTGATA
AAAAAAGGCAGGCTTTCGAACAAATTTTTCGGCCTGAAATTGTTGAGCATATCGATAAATATGACCAGTTTATGAAACAA
GCGGAAGACCCTAAAAAAGATTTAGACACCGATAATGATGGAATAAAAGACCGCTTTTGAGAATTTTTTATTCCTTATTT
TACCCAGGATAAAGTAATTGCCTATATCATTGGTGACTATGAAAAGGACGGAAAAAGAGTTAATTTACGTAGATTTCAAA
AAAACTGAAGTCCAAAATTTAGATCTCAGATCCAAGAAAAAGGACTTAAATTTAACGACCAAAGTCTTGCAGGGATTGGC
AAAACTTTATCAAAAAACGGTTTTAGTTTTTTTGAATGAACTGAGGCAATGCGTGATAATCTCTTAATTGGTAGTGAAAA
AGTTGGTAAATATGGAGAAAAAATTACCAAAGATAACTATAAATTTTTAGTTGATAATTTTATTAAATATATTGCTGAAA
TTACAGGTTTTGACTATTTTGACCTCAGACACAATGTCTTTAAAACTTCAGGACTTGAACTAGTTAATGCAATAATTGAC
CCATCCTTAAACCAAGATGTAGCACTTTTATATAATGGTGATGCACTTGATGCTCATTTTTCAAAGGATAATTACGAAGA
ACTTCAAGAGGAAAATACAATCGCAATTATCCGTCCCAAAAATAATTTAACACTTTTAGATGGTTGAATAATTCTGAAAA
ATACATCTGAAGAACTAACCAATAAAGTTTATAACTCACTTTATCAAGGAGTTTTTAAAGGCGAAGAACTTGAAGTTGAT
CAAATGATTGCTACTATTAAATCCGAGGTAAAATTTAATTATCTTGAGAATCCAGCAACAAAAACATTTATAAAAAACAG
TGGAAAAGGATTTAAATTTGACTATAGTTTGCTTCCTGTTTTAGCAAATTTTGATTATACAAATTATACACCAACATTTA
GAAAATCATTTGAATTTTTCAAAAAATTTTACTTTAATAATGCCGGCGCCAGTGTCCGTGAGTCCGAAGATGGTGAGGAT
ATTACTGTTTTTGTTGATCAACAAGATAAAATTATTACTGATTCTGAAAGCCTAACTTTTTATAAAATAAAATCAAAAAT
TTTTAAAAAATCCTCTCTTCGTGCACTGAATATCTATCTGTCACAGCAAAAGGAACAAACTTTATACGGAAATATCCCAA
CAAAAGATAACGAAAATGAGGGCCGGTATGTAGTTAATTACACTTTTTTAAAACCGATTGATGAAGAATTAGCTTCGCAA
ATTCGGACTTATTATAATTTAAGAACAAAAAATTAG

Upstream 100 bases:

>100_bases
CTTTTAAAACTTGAGCATTGATGTTAGGAACTATTATGCTTTTTTTCCTATTTATTTCAAATTTTATCTGGATTTATTAT
AAAACTAAAAAAGGTGGAAA

Downstream 100 bases:

>100_bases
GATTTTTTAGCTTTTATGGTATACTTTTTAAATCTATGGTAAAATTTAAAAAATTTTTAAAATTAAGCCCAATTTTTTTA
CCTTTAGTTGTTTTTTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MKNKLVYLFGKFAAFICLIILFFIAFFLKSQFGFKPVIYNYESYISDQGREFINKDFNYREFGNISEFTKAIEDNRTIAG
VGSDFQIARLAQKGLLQKIDYSKLFPNWDLVKVFRKPENYQNLSLKEKQEFIDKKRQAFEQIFRPEIVEHIDKYDQFMKQ
AEDPKKDLDTDNDGIKDRFWEFFIPYFTQDKVIAYIIGDYEKDGKRVNLRRFQKNWSPKFRSQIQEKGLKFNDQSLAGIG
KTLSKNGFSFFEWTEAMRDNLLIGSEKVGKYGEKITKDNYKFLVDNFIKYIAEITGFDYFDLRHNVFKTSGLELVNAIID
PSLNQDVALLYNGDALDAHFSKDNYEELQEENTIAIIRPKNNLTLLDGWIILKNTSEELTNKVYNSLYQGVFKGEELEVD
QMIATIKSEVKFNYLENPATKTFIKNSGKGFKFDYSLLPVLANFDYTNYTPTFRKSFEFFKKFYFNNAGASVRESEDGED
ITVFVDQQDKIITDSESLTFYKIKSKIFKKSSLRALNIYLSQQKEQTLYGNIPTKDNENEGRYVVNYTFLKPIDEELASQ
IRTYYNLRTKN

Sequences:

>Translated_571_residues
MKNKLVYLFGKFAAFICLIILFFIAFFLKSQFGFKPVIYNYESYISDQGREFINKDFNYREFGNISEFTKAIEDNRTIAG
VGSDFQIARLAQKGLLQKIDYSKLFPN*DLVKVFRKPENYQNLSLKEKQEFIDKKRQAFEQIFRPEIVEHIDKYDQFMKQ
AEDPKKDLDTDNDGIKDRF*EFFIPYFTQDKVIAYIIGDYEKDGKRVNLRRFQKN*SPKFRSQIQEKGLKFNDQSLAGIG
KTLSKNGFSFFE*TEAMRDNLLIGSEKVGKYGEKITKDNYKFLVDNFIKYIAEITGFDYFDLRHNVFKTSGLELVNAIID
PSLNQDVALLYNGDALDAHFSKDNYEELQEENTIAIIRPKNNLTLLDG*IILKNTSEELTNKVYNSLYQGVFKGEELEVD
QMIATIKSEVKFNYLENPATKTFIKNSGKGFKFDYSLLPVLANFDYTNYTPTFRKSFEFFKKFYFNNAGASVRESEDGED
ITVFVDQQDKIITDSESLTFYKIKSKIFKKSSLRALNIYLSQQKEQTLYGNIPTKDNENEGRYVVNYTFLKPIDEELASQ
IRTYYNLRTKN
>Mature_571_residues
MKNKLVYLFGKFAAFICLIILFFIAFFLKSQFGFKPVIYNYESYISDQGREFINKDFNYREFGNISEFTKAIEDNRTIAG
VGSDFQIARLAQKGLLQKIDYSKLFPN*DLVKVFRKPENYQNLSLKEKQEFIDKKRQAFEQIFRPEIVEHIDKYDQFMKQ
AEDPKKDLDTDNDGIKDRF*EFFIPYFTQDKVIAYIIGDYEKDGKRVNLRRFQKN*SPKFRSQIQEKGLKFNDQSLAGIG
KTLSKNGFSFFE*TEAMRDNLLIGSEKVGKYGEKITKDNYKFLVDNFIKYIAEITGFDYFDLRHNVFKTSGLELVNAIID
PSLNQDVALLYNGDALDAHFSKDNYEELQEENTIAIIRPKNNLTLLDG*IILKNTSEELTNKVYNSLYQGVFKGEELEVD
QMIATIKSEVKFNYLENPATKTFIKNSGKGFKFDYSLLPVLANFDYTNYTPTFRKSFEFFKKFYFNNAGASVRESEDGED
ITVFVDQQDKIITDSESLTFYKIKSKIFKKSSLRALNIYLSQQKEQTLYGNIPTKDNENEGRYVVNYTFLKPIDEELASQ
IRTYYNLRTKN

Specific function: Unknown

COG id: COG0687

COG function: function code E; Spermidine/putrescine-binding periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66066; Mature: 66066

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKLVYLFGKFAAFICLIILFFIAFFLKSQFGFKPVIYNYESYISDQGREFINKDFNYR
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCCH
EFGNISEFTKAIEDNRTIAGVGSDFQIARLAQKGLLQKIDYSKLFPNDLVKVFRKPENYQ
HCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCC
NLSLKEKQEFIDKKRQAFEQIFRPEIVEHIDKYDQFMKQAEDPKKDLDTDNDGIKDRFEF
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHH
FIPYFTQDKVIAYIIGDYEKDGKRVNLRRFQKNSPKFRSQIQEKGLKFNDQSLAGIGKTL
HCCEECCCCEEEEEECCCCCCCCEEHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHH
SKNGFSFFETEAMRDNLLIGSEKVGKYGEKITKDNYKFLVDNFIKYIAEITGFDYFDLRH
HCCCCCHHHHHHHHCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
NVFKTSGLELVNAIIDPSLNQDVALLYNGDALDAHFSKDNYEELQEENTIAIIRPKNNLT
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCE
LLDGIILKNTSEELTNKVYNSLYQGVFKGEELEVDQMIATIKSEVKFNYLENPATKTFIK
EEEHEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
NSGKGFKFDYSLLPVLANFDYTNYTPTFRKSFEFFKKFYFNNAGASVRESEDGEDITVFV
CCCCCEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
DQQDKIITDSESLTFYKIKSKIFKKSSLRALNIYLSQQKEQTLYGNIPTKDNENEGRYVV
CCCCCEEECCCCEEEHHHHHHHHHHHCCEEEEEEHHCCCCCCEECCCCCCCCCCCCCEEE
NYTFLKPIDEELASQIRTYYNLRTKN
EEEECCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNKLVYLFGKFAAFICLIILFFIAFFLKSQFGFKPVIYNYESYISDQGREFINKDFNYR
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCCH
EFGNISEFTKAIEDNRTIAGVGSDFQIARLAQKGLLQKIDYSKLFPNDLVKVFRKPENYQ
HCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCC
NLSLKEKQEFIDKKRQAFEQIFRPEIVEHIDKYDQFMKQAEDPKKDLDTDNDGIKDRFEF
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHH
FIPYFTQDKVIAYIIGDYEKDGKRVNLRRFQKNSPKFRSQIQEKGLKFNDQSLAGIGKTL
HCCEECCCCEEEEEECCCCCCCCEEHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHH
SKNGFSFFETEAMRDNLLIGSEKVGKYGEKITKDNYKFLVDNFIKYIAEITGFDYFDLRH
HCCCCCHHHHHHHHCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
NVFKTSGLELVNAIIDPSLNQDVALLYNGDALDAHFSKDNYEELQEENTIAIIRPKNNLT
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCE
LLDGIILKNTSEELTNKVYNSLYQGVFKGEELEVDQMIATIKSEVKFNYLENPATKTFIK
EEEHEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
NSGKGFKFDYSLLPVLANFDYTNYTPTFRKSFEFFKKFYFNNAGASVRESEDGEDITVFV
CCCCCEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
DQQDKIITDSESLTFYKIKSKIFKKSSLRALNIYLSQQKEQTLYGNIPTKDNENEGRYVV
CCCCCEEECCCCEEEHHHHHHHHHHHCCEEEEEEHHCCCCCCEECCCCCCCCCCCCCEEE
NYTFLKPIDEELASQIRTYYNLRTKN
EEEECCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA