| Definition | Mycoplasma hyopneumoniae 232, complete genome. |
|---|---|
| Accession | NC_006360 |
| Length | 892,758 |
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The map label for this gene is 54020303
Identifier: 54020303
GI number: 54020303
Start: 881101
End: 882066
Strand: Direct
Name: 54020303
Synonym: mhp692
Alternate gene names: NA
Gene position: 881101-882066 (Clockwise)
Preceding gene: 54020302
Following gene: 54020304
Centisome position: 98.69
GC content: 30.54
Gene sequence:
>966_bases ATGCCTAGATTAACAAATATGAAAATCTCTTTTGTCGCTATCTTCATATCGATTGCGGTGATTATGTTAATAATTGGGGT AAGATTAGCTCCTTTTGCCATCTTGCCTAATTTCCGCCTTTCAATTATCGGGTTGCCGATTAAAATAACCGGGTTTATTT TTGGGCCAATTGTTGGATTTTTAACTGGATTACTCGCTGATTTAATCACTTTTTTGTTCATCCCGGGGGTTTATTCTTGA TATTATACCCTTCATCTTTCGCTTGCTGGGTTCATTCCTGGAATTTTTTTCTGATTTTTTGTAATTAAAGGGAAGAAATG ATTTGAGAAAAAAAGTATTTTAACTCGTTTAGACCAAAAAATTTTTGAACAAAAACAGAAAATTTTTGATTTTACATATT ATAGAATCGCTAACAACCAAAAAGATGAAAATTTAGAACGAAAAATGAAGCAAAAATTACTTTTTTTACAAAAAAAAGTA AAGAAAGTTGAAAGTTGGCAAGAAGAAAAATCACTGCTGAATTTTTATTGAATTGCCAGTAATTTAATCCTGATTTCAAT TGTAGTAACAACTATTTATGTTGTTATGTTTAGCTCTTCAATTGATTTTAGTCAGTCTCGTTTTATTTCCAGTAAACTTT CCTTTCTAATTTTAACACTTTTTGGGACAGTTTCAATGATAATTTTCCTGCTTTTGGCGAGATTTATTAATTTTTTTCGA AAAAATGAAAGATATTTAACAATCGCGCCAATTGTTGTTTTTTCCGCGCTTCATGAACCAATCGCAAGCATTATTGGGGC AAGAGGAGATGTCCAATCTGGGGCACTAAACAATTTTGATACCGCTTTTTTAAGCCACATCATCGTTTCACCTGTAAAAA TTTGAATTAATTTATCAGTTATTTATTTTACAGCAAAAGCGGTTGTACCACTTGTTTATAAAAAATTTTCTTATTCTATC ACTTAA
Upstream 100 bases:
>100_bases CGGCGAAAAAAATACTATAATTTCTTTACTTTTTTTTATTTTTAGATTATAATTTATAATAATATTAATAACTAAAAATT TCAGATAAAGGAGAAAGTTC
Downstream 100 bases:
>100_bases AAAACGGCTAATATGACTAATTTACATCAGGAAAAACGTAAAAAACTGCTTTTTCATAATATAAAAAATAAATACTGAAA CTATTTTAGCCTAGAATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MPRLTNMKISFVAIFISIAVIMLIIGVRLAPFAILPNFRLSIIGLPIKITGFIFGPIVGFLTGLLADLITFLFIPGVYSW YYTLHLSLAGFIPGIFFWFFVIKGKKWFEKKSILTRLDQKIFEQKQKIFDFTYYRIANNQKDENLERKMKQKLLFLQKKV KKVESWQEEKSLLNFYWIASNLILISIVVTTIYVVMFSSSIDFSQSRFISSKLSFLILTLFGTVSMIIFLLLARFINFFR KNERYLTIAPIVVFSALHEPIASIIGARGDVQSGALNNFDTAFLSHIIVSPVKIWINLSVIYFTAKAVVPLVYKKFSYSI T
Sequences:
>Translated_321_residues MPRLTNMKISFVAIFISIAVIMLIIGVRLAPFAILPNFRLSIIGLPIKITGFIFGPIVGFLTGLLADLITFLFIPGVYS* YYTLHLSLAGFIPGIFF*FFVIKGKK*FEKKSILTRLDQKIFEQKQKIFDFTYYRIANNQKDENLERKMKQKLLFLQKKV KKVESWQEEKSLLNFY*IASNLILISIVVTTIYVVMFSSSIDFSQSRFISSKLSFLILTLFGTVSMIIFLLLARFINFFR KNERYLTIAPIVVFSALHEPIASIIGARGDVQSGALNNFDTAFLSHIIVSPVKI*INLSVIYFTAKAVVPLVYKKFSYSI T >Mature_320_residues PRLTNMKISFVAIFISIAVIMLIIGVRLAPFAILPNFRLSIIGLPIKITGFIFGPIVGFLTGLLADLITFLFIPGVYS*Y YTLHLSLAGFIPGIFF*FFVIKGKK*FEKKSILTRLDQKIFEQKQKIFDFTYYRIANNQKDENLERKMKQKLLFLQKKVK KVESWQEEKSLLNFY*IASNLILISIVVTTIYVVMFSSSIDFSQSRFISSKLSFLILTLFGTVSMIIFLLLARFINFFRK NERYLTIAPIVVFSALHEPIASIIGARGDVQSGALNNFDTAFLSHIIVSPVKI*INLSVIYFTAKAVVPLVYKKFSYSIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35928; Mature: 35797
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLTNMKISFVAIFISIAVIMLIIGVRLAPFAILPNFRLSIIGLPIKITGFIFGPIVGF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH LTGLLADLITFLFIPGVYSYYTLHLSLAGFIPGIFFFFVIKGKKFEKKSILTRLDQKIFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH QKQKIFDFTYYRIANNQKDENLERKMKQKLLFLQKKVKKVESWQEEKSLLNFYIASNLIL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISIVVTTIYVVMFSSSIDFSQSRFISSKLSFLILTLFGTVSMIIFLLLARFINFFRKNER HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YLTIAPIVVFSALHEPIASIIGARGDVQSGALNNFDTAFLSHIIVSPVKIINLSVIYFTA EEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH KAVVPLVYKKFSYSIT HHHHHHHHHHHCCCCC >Mature Secondary Structure PRLTNMKISFVAIFISIAVIMLIIGVRLAPFAILPNFRLSIIGLPIKITGFIFGPIVGF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH LTGLLADLITFLFIPGVYSYYTLHLSLAGFIPGIFFFFVIKGKKFEKKSILTRLDQKIFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH QKQKIFDFTYYRIANNQKDENLERKMKQKLLFLQKKVKKVESWQEEKSLLNFYIASNLIL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISIVVTTIYVVMFSSSIDFSQSRFISSKLSFLILTLFGTVSMIIFLLLARFINFFRKNER HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YLTIAPIVVFSALHEPIASIIGARGDVQSGALNNFDTAFLSHIIVSPVKIINLSVIYFTA EEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH KAVVPLVYKKFSYSIT HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA