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The map label for this gene is ihfB [C]

Identifier: 54020025

GI number: 54020025

Start: 94248

End: 94538

Strand: Direct

Name: ihfB [C]

Synonym: mhp077

Alternate gene names: 54020025

Gene position: 94248-94538 (Clockwise)

Preceding gene: 54020024

Following gene: 54020026

Centisome position: 10.56

GC content: 29.55

Gene sequence:

>291_bases
ATGAATGGAGTCATTAAAATGAACAAAAAAGAACTAATTGAGCAAATTGCAATTAAAACCAATCTTCCTATAAAAAATAT
TGAGCTTGTTTTAAATGAATTTTTTGGAATAACAGCAGATGTTGTCAAAAAACAAGGAAAATTAGTGATTAACTCTTTTG
GAACTTTCCAAGGAGTTTTCAAGCCCGCATCTTCTTCATTTAATCCACTAACCAAAACCCAGATTACAGTCAATGCAAAA
ACAACAGTGAGATTTAAACCTTCAAAAGTTCTAAAAGATTTTATTGCCTAA

Upstream 100 bases:

>100_bases
GCGCAAGTATTTTGATTTTTTTGGCTGTCCAATTAAAATTATTTATAAAAATATTACAAAAAAATAAGAAAATAAAGTAA
AATTTATAATTATCTTAGTT

Downstream 100 bases:

>100_bases
AAATGTTTAGAAAAAGCAAAAAAAAGCCGAAATTTAAATACAAAACCGCAAATCAAGTAATTTATGGAAATGTAGTTTTA
CAAAAACTTAAAGAGATTAA

Product: nucleoid DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNGVIKMNKKELIEQIAIKTNLPIKNIELVLNEFFGITADVVKKQGKLVINSFGTFQGVFKPASSSFNPLTKTQITVNAK
TTVRFKPSKVLKDFIA

Sequences:

>Translated_96_residues
MNGVIKMNKKELIEQIAIKTNLPIKNIELVLNEFFGITADVVKKQGKLVINSFGTFQGVFKPASSSFNPLTKTQITVNAK
TTVRFKPSKVLKDFIA
>Mature_96_residues
MNGVIKMNKKELIEQIAIKTNLPIKNIELVLNEFFGITADVVKKQGKLVINSFGTFQGVFKPASSSFNPLTKTQITVNAK
TTVRFKPSKVLKDFIA

Specific function: This Protein Is One Of The Two Subunits Of Integration Host Factor, A Specific DNA-Binding Protein That Functions In Genetic Recombination As Well As In Transcriptional And Translational Control. Ihf Also Plays A Crucial Role In The Lysogenic Life Cycle

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10670; Mature: 10670

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGVIKMNKKELIEQIAIKTNLPIKNIELVLNEFFGITADVVKKQGKLVINSFGTFQGVF
CCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCEEEECCCCCHHHC
KPASSSFNPLTKTQITVNAKTTVRFKPSKVLKDFIA
CCCCCCCCCCCCEEEEEECCEEEEECHHHHHHHHCC
>Mature Secondary Structure
MNGVIKMNKKELIEQIAIKTNLPIKNIELVLNEFFGITADVVKKQGKLVINSFGTFQGVF
CCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCEEEECCCCCHHHC
KPASSSFNPLTKTQITVNAKTTVRFKPSKVLKDFIA
CCCCCCCCCCCCEEEEEECCEEEEECHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA