Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

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The map label for this gene is 53723304

Identifier: 53723304

GI number: 53723304

Start: 3075738

End: 3076256

Strand: Reverse

Name: 53723304

Synonym: BPSS2286

Alternate gene names: NA

Gene position: 3076256-3075738 (Counterclockwise)

Preceding gene: 53723306

Following gene: 53723298

Centisome position: 96.95

GC content: 67.44

Gene sequence:

>519_bases
GTGCCGGCCGCGATAGCCGCTCCCATCCGCGACGCCCGTACCCACCTTGTCCACGAACGGAGGCCGATCGTGAATGCTGC
CGAGATCTGTACACGCGAGGTCGTCGCGTGCCGCCGCACCGATACCGTGCTCGACGCCGCGCACCTGATGCGCGACCGCC
ATGTCGGCGACCTGATCGTCGTCGACGACGCGGGGCACGCGCACGCGCCGGTCGGCATGCTGACCGACCGCGACATCGTG
CTGTCGCTGATCGCGAAGGACGTCGATCCCGCCGCGTTGTTCGTCGGCGAGATCATGTCCGCGCCGGCGGCCGTCGTTCA
CGAGCACGACAGCCTGTGGACGATCGCGCAGCGAATGCGGCTGACGGGTGTACGCCGGATGCCGGTCGTGAATGCCGACG
GCGCGCTCGTCGGAATGGTGTCCGTCGACGATCTGCTGGCGAGCGTGGCGGCGTTGTTCGACGAGATCGCGTCGATTTCG
CGGCGTCAGATTCATTTTGAGGAGAAGGCGCGGGATTGA

Upstream 100 bases:

>100_bases
GCAGCGCGGGAAGCGGCTTCGGCGTTTTGTGGGGGCGGGAACCCGGAGCCGGGAAGCGGCAAGCAGAAAGCCGCGAAACC
GAAAGCCGCGTAGCCGGCGT

Downstream 100 bases:

>100_bases
CGGATGCTGTCGTCTCGTCTCGTCTCGTCTCGTCTCGTCTCGTCTCGCGCCGTGTTGCGTCTATATCGATATCCAAGGGG
AAGGCGACGTTGATGTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: OrfX [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MPAAIAAPIRDARTHLVHERRPIVNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIV
LSLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMRLTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASIS
RRQIHFEEKARD

Sequences:

>Translated_172_residues
MPAAIAAPIRDARTHLVHERRPIVNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIV
LSLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMRLTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASIS
RRQIHFEEKARD
>Mature_171_residues
PAAIAAPIRDARTHLVHERRPIVNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIVL
SLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMRLTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASISR
RQIHFEEKARD

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 18730; Mature: 18599

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAIAAPIRDARTHLVHERRPIVNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIV
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VDDAGHAHAPVGMLTDRDIVLSLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMR
EECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHH
LTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASISRRQIHFEEKARD
HHCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAAIAAPIRDARTHLVHERRPIVNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIV
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VDDAGHAHAPVGMLTDRDIVLSLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMR
EECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHH
LTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASISRRQIHFEEKARD
HHCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014; 8522533 [H]