| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723304
Identifier: 53723304
GI number: 53723304
Start: 3075738
End: 3076256
Strand: Reverse
Name: 53723304
Synonym: BPSS2286
Alternate gene names: NA
Gene position: 3076256-3075738 (Counterclockwise)
Preceding gene: 53723306
Following gene: 53723298
Centisome position: 96.95
GC content: 67.44
Gene sequence:
>519_bases GTGCCGGCCGCGATAGCCGCTCCCATCCGCGACGCCCGTACCCACCTTGTCCACGAACGGAGGCCGATCGTGAATGCTGC CGAGATCTGTACACGCGAGGTCGTCGCGTGCCGCCGCACCGATACCGTGCTCGACGCCGCGCACCTGATGCGCGACCGCC ATGTCGGCGACCTGATCGTCGTCGACGACGCGGGGCACGCGCACGCGCCGGTCGGCATGCTGACCGACCGCGACATCGTG CTGTCGCTGATCGCGAAGGACGTCGATCCCGCCGCGTTGTTCGTCGGCGAGATCATGTCCGCGCCGGCGGCCGTCGTTCA CGAGCACGACAGCCTGTGGACGATCGCGCAGCGAATGCGGCTGACGGGTGTACGCCGGATGCCGGTCGTGAATGCCGACG GCGCGCTCGTCGGAATGGTGTCCGTCGACGATCTGCTGGCGAGCGTGGCGGCGTTGTTCGACGAGATCGCGTCGATTTCG CGGCGTCAGATTCATTTTGAGGAGAAGGCGCGGGATTGA
Upstream 100 bases:
>100_bases GCAGCGCGGGAAGCGGCTTCGGCGTTTTGTGGGGGCGGGAACCCGGAGCCGGGAAGCGGCAAGCAGAAAGCCGCGAAACC GAAAGCCGCGTAGCCGGCGT
Downstream 100 bases:
>100_bases CGGATGCTGTCGTCTCGTCTCGTCTCGTCTCGTCTCGTCTCGTCTCGCGCCGTGTTGCGTCTATATCGATATCCAAGGGG AAGGCGACGTTGATGTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: OrfX [H]
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPAAIAAPIRDARTHLVHERRPIVNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIV LSLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMRLTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASIS RRQIHFEEKARD
Sequences:
>Translated_172_residues MPAAIAAPIRDARTHLVHERRPIVNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIV LSLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMRLTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASIS RRQIHFEEKARD >Mature_171_residues PAAIAAPIRDARTHLVHERRPIVNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIVL SLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMRLTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASISR RQIHFEEKARD
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 18730; Mature: 18599
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAIAAPIRDARTHLVHERRPIVNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIV CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VDDAGHAHAPVGMLTDRDIVLSLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMR EECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHH LTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASISRRQIHFEEKARD HHCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PAAIAAPIRDARTHLVHERRPIVNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIV CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VDDAGHAHAPVGMLTDRDIVLSLIAKDVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMR EECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHH LTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASISRRQIHFEEKARD HHCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014; 8522533 [H]