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The map label for this gene is rfaQ [C]

Identifier: 53723273

GI number: 53723273

Start: 3029942

End: 3031801

Strand: Reverse

Name: rfaQ [C]

Synonym: BPSS2255

Alternate gene names: 53723273

Gene position: 3031801-3029942 (Counterclockwise)

Preceding gene: 53723274

Following gene: 53723272

Centisome position: 95.55

GC content: 73.33

Gene sequence:

>1860_bases
ATGAGCCCCGCCGAGCGCGCGATGACGCTTCACGCGTGGCGGCGCGCGCGCCGCATTCTGTGCGTGAGGCTCGACAACAT
GGGTGACGTGCTGATGACGACGCCCGCGTTGCGCGCGCTGAAGGAAAGCGGCGAAGGGCGGCACTTGACGCTGCTCACGT
CGAGCGCGGCCGCGCCGCTCGCCGCGCATCTGCCGATGATCGACGACGTGTGGATCTACGATGCGCCGTGGGTCAAGCAT
CCGGGCGCGGACGACGGCGCGGCCGCGGACGTCGCGATGATCGAGCGGCTCCTGTGCGGCGGCTTCGACGCCGCGGCGAT
CTTCACCGTCTACAGCCAGAGCCCGCTGCCCGCCGCGATGATGTGCCGGCTCGCGGGGATCGCGCTGCGGCTCGCGCATT
GCCGCGAGAATCCGTACCGGCTGCTGACCGAGCGCATCGCGGAAACGGAGCCGCAGGTGCAGTTGCGCCATGAAGTGGCG
CGGCAACTGGCGCTCGTGCGCGAGGTGGGCGCGACGACGCGCGACATGCGGCTCGCGTTCGAGCCGGGCGACGCCGCGCG
GCGCGCTGTGCGCGCGCGGCTGCGTGCGGCGCGGCTTGCGTGGCGCGCGCAGGCGGAGGGGGGCGCGGAAGGCGACGGGC
GGGATCGCGCGCAGGCGCGCGGGGCGGGGGCTTGCCTCGAGCCGGACGACGCGGCGGCTTCGGCTGCTTCGACGCGTTCG
GCTGCGGCCGAGGCGAATGGCTCCGACGATTCGTTTGCGGCCCACGGGGGAAATACTCCAATCGCTGCGACTGCTTCGGT
TGTTCCGGCTGCCGCGGCTGCATCGGTCAAGTCGACTGCATCGACCGATTCGGCTGATTCGACCGATTCGACCGATTCGA
CCGATTCGGCTGATGCGGCTGATTCGATCGCTTCAGCCGCTGCGGTTGCCGCAAGCAATCCGAACGATTCAACCGATCCG
CCCACCGACCTCGGCCGCTGGCTCGTCGTTCATCCGGGCGCGAGCGCGGCGTCGCGGCGCTGGCCCGCCGAGCGCTTCGC
GGACGTCGTCGCGCGCGTCGCCCGGTATTTCGACGGCGTAGCGGTGACGGGCGGCGCGCACGAGCGCGCGCTCGTCGAGA
CTGTTTGCGCGCGCGCCGGCAAGCGCGTGCTGCCATTGGCCGGCGCGCTGTCGATCGGCGAGCTCGGCGCGCTGATCGAA
GCGGCCGACCTGCTGCTCGCGAACAACAGCGGCCCCGTGCATCTCGCGACGGCGCTGGGCACGCCGGTGGTCGATCTGTA
TGCGCTGACGAATCCGCAGCACACGCCGTGGCGCGTGCCGAGCCGCGTGCTGAACGCCGACGTGCCGTGCCGTCACTGTT
ACCGCAGCGTCTGCGATCAGCCGGGCCATCCTTGCCTCGAGCGCGTGAGCGTGGACGACGTCGTCGCGGCCGTGCGCGAA
CTGATGCGCGAAACCACGGGTTCGCACGGCGCGGGCGGCGGCGGCGCGGTGTCGCCGATTCGCGGCGGCGCAGCGCGGCA
CGGTACGCACGCCGGCTCCGTGCGCGGCGCGGCCGCGCCCTGCGCCGTGCGGGGCGCCGCGCATGCGCGCGACGCATCGG
AGCCCGCCGTGAGCGCGTCGGCGCTTGCCGTGCGCGCAGCCGGCGCGCATGCATCCGACGCGGGCTTGTCCGCGGCCGGG
GCATCCGCTCGCGGCGTATCCGCTGCCGGCGTGCCCGTCGAGGGCGGACCGCTTGCCGACCCGCCGCACGACGCACCGCC
CACGCCGCCCATGCCGCCCCCACGCGCCGCCGTCCCTTCAACCGCTTCGCCGCGCGCGGCGAACGTCGTTCCGATCACCT
CCGCGACCGCAAGGACCTGA

Upstream 100 bases:

>100_bases
CGTCGCGGCTCGACGACGCCGCGTGGATCGTCGCGCGCGAATGCGCGGCGACGGCCGCGGCGCCGGCCGCGCCGGGCGAA
GCGCCGCAAGAGGGGCGGCG

Downstream 100 bases:

>100_bases
CGCATGGCCAAATCCCGTCCACCGCTCTACACGCTCGGCATCAACGCCGCGTTCCACGATAGCGCCGCGTGCCTCGTGCG
CGACGGCGCCGTCGTCGCGG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Lipopolysaccharide Heptosyltransferase II; Glycosyltransferase; Heptosyltransferase Family Protein; ADP-Heptose-LPS Heptosyltransferase II; Lipopolysaccharide Heptosyltransferase III; ADP-HeptoseLPS Heptosyltransferase; Glycosyl Transferase; Transferase; HAD Superfamily Hydrolase; ADP-Heptose; Lipopolysaccharide Heptosyltransferase I; Family 9 Glycosyl Transferase; Heptosyltransferase Family; ADP-HeptoseLPS Heptosyltransferase-Like Protein; ADP-Heptose-Lipopolysaccharide Heptosyltransferase II; ADP-Heptose-LPS Heptosyltransferase; ADP-HeptoseLPS Heptosyltransferase II; Lipopolysaccharide Core Biosynthesis Heptosyltransferase; Heptosyltransferase; Glycosyl Transferase Gt9A; Lipopolysaccharide Biosynthesis Protein; Lipopolysaccharide Heptosyltransferase; Hydrolase; Glycosyl Transferase ADP-HeptoseLPS Heptosyltransferase

Number of amino acids: Translated: 619; Mature: 618

Protein sequence:

>619_residues
MSPAERAMTLHAWRRARRILCVRLDNMGDVLMTTPALRALKESGEGRHLTLLTSSAAAPLAAHLPMIDDVWIYDAPWVKH
PGADDGAAADVAMIERLLCGGFDAAAIFTVYSQSPLPAAMMCRLAGIALRLAHCRENPYRLLTERIAETEPQVQLRHEVA
RQLALVREVGATTRDMRLAFEPGDAARRAVRARLRAARLAWRAQAEGGAEGDGRDRAQARGAGACLEPDDAAASAASTRS
AAAEANGSDDSFAAHGGNTPIAATASVVPAAAAASVKSTASTDSADSTDSTDSTDSADAADSIASAAAVAASNPNDSTDP
PTDLGRWLVVHPGASAASRRWPAERFADVVARVARYFDGVAVTGGAHERALVETVCARAGKRVLPLAGALSIGELGALIE
AADLLLANNSGPVHLATALGTPVVDLYALTNPQHTPWRVPSRVLNADVPCRHCYRSVCDQPGHPCLERVSVDDVVAAVRE
LMRETTGSHGAGGGGAVSPIRGGAARHGTHAGSVRGAAAPCAVRGAAHARDASEPAVSASALAVRAAGAHASDAGLSAAG
ASARGVSAAGVPVEGGPLADPPHDAPPTPPMPPPRAAVPSTASPRAANVVPITSATART

Sequences:

>Translated_619_residues
MSPAERAMTLHAWRRARRILCVRLDNMGDVLMTTPALRALKESGEGRHLTLLTSSAAAPLAAHLPMIDDVWIYDAPWVKH
PGADDGAAADVAMIERLLCGGFDAAAIFTVYSQSPLPAAMMCRLAGIALRLAHCRENPYRLLTERIAETEPQVQLRHEVA
RQLALVREVGATTRDMRLAFEPGDAARRAVRARLRAARLAWRAQAEGGAEGDGRDRAQARGAGACLEPDDAAASAASTRS
AAAEANGSDDSFAAHGGNTPIAATASVVPAAAAASVKSTASTDSADSTDSTDSTDSADAADSIASAAAVAASNPNDSTDP
PTDLGRWLVVHPGASAASRRWPAERFADVVARVARYFDGVAVTGGAHERALVETVCARAGKRVLPLAGALSIGELGALIE
AADLLLANNSGPVHLATALGTPVVDLYALTNPQHTPWRVPSRVLNADVPCRHCYRSVCDQPGHPCLERVSVDDVVAAVRE
LMRETTGSHGAGGGGAVSPIRGGAARHGTHAGSVRGAAAPCAVRGAAHARDASEPAVSASALAVRAAGAHASDAGLSAAG
ASARGVSAAGVPVEGGPLADPPHDAPPTPPMPPPRAAVPSTASPRAANVVPITSATART
>Mature_618_residues
SPAERAMTLHAWRRARRILCVRLDNMGDVLMTTPALRALKESGEGRHLTLLTSSAAAPLAAHLPMIDDVWIYDAPWVKHP
GADDGAAADVAMIERLLCGGFDAAAIFTVYSQSPLPAAMMCRLAGIALRLAHCRENPYRLLTERIAETEPQVQLRHEVAR
QLALVREVGATTRDMRLAFEPGDAARRAVRARLRAARLAWRAQAEGGAEGDGRDRAQARGAGACLEPDDAAASAASTRSA
AAEANGSDDSFAAHGGNTPIAATASVVPAAAAASVKSTASTDSADSTDSTDSTDSADAADSIASAAAVAASNPNDSTDPP
TDLGRWLVVHPGASAASRRWPAERFADVVARVARYFDGVAVTGGAHERALVETVCARAGKRVLPLAGALSIGELGALIEA
ADLLLANNSGPVHLATALGTPVVDLYALTNPQHTPWRVPSRVLNADVPCRHCYRSVCDQPGHPCLERVSVDDVVAAVREL
MRETTGSHGAGGGGAVSPIRGGAARHGTHAGSVRGAAAPCAVRGAAHARDASEPAVSASALAVRAAGAHASDAGLSAAGA
SARGVSAAGVPVEGGPLADPPHDAPPTPPMPPPRAAVPSTASPRAANVVPITSATART

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 63258; Mature: 63127

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAERAMTLHAWRRARRILCVRLDNMGDVLMTTPALRALKESGEGRHLTLLTSSAAAPL
CCHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
AAHLPMIDDVWIYDAPWVKHPGADDGAAADVAMIERLLCGGFDAAAIFTVYSQSPLPAAM
HHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEECCCCCCHHH
MCRLAGIALRLAHCRENPYRLLTERIAETEPQVQLRHEVARQLALVREVGATTRDMRLAF
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
EPGDAARRAVRARLRAARLAWRAQAEGGAEGDGRDRAQARGAGACLEPDDAAASAASTRS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH
AAAEANGSDDSFAAHGGNTPIAATASVVPAAAAASVKSTASTDSADSTDSTDSTDSADAA
HHHCCCCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
DSIASAAAVAASNPNDSTDPPTDLGRWLVVHPGASAASRRWPAERFADVVARVARYFDGV
HHHHHHHHHHCCCCCCCCCCCHHHCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCE
AVTGGAHERALVETVCARAGKRVLPLAGALSIGELGALIEAADLLLANNSGPVHLATALG
EEECCCHHHHHHHHHHHHCCCEEECHHCCCCHHHHHHHHHHHHHHEECCCCCEEEEHHHC
TPVVDLYALTNPQHTPWRVPSRVLNADVPCRHCYRSVCDQPGHPCLERVSVDDVVAAVRE
CCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHH
LMRETTGSHGAGGGGAVSPIRGGAARHGTHAGSVRGAAAPCAVRGAAHARDASEPAVSAS
HHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCHHHH
ALAVRAAGAHASDAGLSAAGASARGVSAAGVPVEGGPLADPPHDAPPTPPMPPPRAAVPS
HHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TASPRAANVVPITSATART
CCCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
SPAERAMTLHAWRRARRILCVRLDNMGDVLMTTPALRALKESGEGRHLTLLTSSAAAPL
CHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
AAHLPMIDDVWIYDAPWVKHPGADDGAAADVAMIERLLCGGFDAAAIFTVYSQSPLPAAM
HHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEECCCCCCHHH
MCRLAGIALRLAHCRENPYRLLTERIAETEPQVQLRHEVARQLALVREVGATTRDMRLAF
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
EPGDAARRAVRARLRAARLAWRAQAEGGAEGDGRDRAQARGAGACLEPDDAAASAASTRS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH
AAAEANGSDDSFAAHGGNTPIAATASVVPAAAAASVKSTASTDSADSTDSTDSTDSADAA
HHHCCCCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
DSIASAAAVAASNPNDSTDPPTDLGRWLVVHPGASAASRRWPAERFADVVARVARYFDGV
HHHHHHHHHHCCCCCCCCCCCHHHCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCE
AVTGGAHERALVETVCARAGKRVLPLAGALSIGELGALIEAADLLLANNSGPVHLATALG
EEECCCHHHHHHHHHHHHCCCEEECHHCCCCHHHHHHHHHHHHHHEECCCCCEEEEHHHC
TPVVDLYALTNPQHTPWRVPSRVLNADVPCRHCYRSVCDQPGHPCLERVSVDDVVAAVRE
CCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHH
LMRETTGSHGAGGGGAVSPIRGGAARHGTHAGSVRGAAAPCAVRGAAHARDASEPAVSAS
HHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCHHHH
ALAVRAAGAHASDAGLSAAGASARGVSAAGVPVEGGPLADPPHDAPPTPPMPPPRAAVPS
HHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TASPRAANVVPITSATART
CCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA