| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723272
Identifier: 53723272
GI number: 53723272
Start: 3028184
End: 3029938
Strand: Reverse
Name: 53723272
Synonym: BPSS2254
Alternate gene names: NA
Gene position: 3029938-3028184 (Counterclockwise)
Preceding gene: 53723273
Following gene: 53723271
Centisome position: 95.49
GC content: 70.03
Gene sequence:
>1755_bases ATGGCCAAATCCCGTCCACCGCTCTACACGCTCGGCATCAACGCCGCGTTCCACGATAGCGCCGCGTGCCTCGTGCGCGA CGGCGCCGTCGTCGCGGCGGCCGAGGAGGAGCGCTTCACGCGCATCAAGCACGGCAAGCGCCCGGTGCCGTTCTCGACCT GGGAGCTGCCGTATCACGCCATCGACTATTGCCTCGCCGAGGCGGGCATCACGCTCGCCGAAGTCGCGCACGTCGCGTAC TCGTACGATCCGTGGCAGCAGATCGAGCGCGACGGCCGCGAGCCGACGTTCACGCTGCCGCTGTCGCCATCCGCGCATGC GCGCGCGAACGGGCATGCGTCGCCGTGGGAGCCGCTATTCCTGTCGTACATCGTCAACGCGCCGCGCCAGCTCGCGGACG GCGCGCCGCATCATCTGCGCCGGCGCTTTCGCGGCGTGACGCCCGATGGGCCGTTCCGCTGGCATTTCGTCGAACATCAT CTGTCGCACGAGGCGAGCGCGTTCCTCGCCGCGCCGTTTTCGCACTGCGCGGTGCTGACGATGGACGGCCGCGGCGAGAA GGCGACGACGAGCTACGGCGTGTTCGACGGCCACGTGTACCGCCGTGTCGGCCAAGTCGATCTGCCGCATTCGCTTGGCC TGCTGTATGAGCGCGTGACGCGCCATCTCGGCTTCCTGCACTCGTCCGACGAGTACAAGGTGATGGCGCTCGCGTCGTTC GGCAAGCCGGCGTTCGCGCACGCGCTGCGCCGCCTCGTGCGCTATGTCGGCGACGGCCGCTACGAAACGCCCGCGCTCGA TCTGCGCGAGCTGCTCGGCCCGCCGCGCGAGCGCGGCGCGCGCGTCGAGCCGCGCCATTGCGACATCGCGCACTCGCTGC AGGCGGTGCTCGAAGAGGTGGTGCTGGAGATCGTCGATTGGCTTGCCGGCGCAACCGGCGAGAAGCGCCTCGCGATGGCG GGCGGCGTCGCGCTGAACTGCGTGATGAACGCGAAGATCCGCGATCGCGGCCGCTTCGAGGACGTCTGGGTGCAGCCCGC CGCGGGCGACGCGGGCACCGCGCTCGGCGCGGCGCTGTGGACGGATTTCAGCGAACGCGGCGAGCGCGGCGGCTGGCGGA TGGATCATGCGTTCCTCGGCCCGGCATACGACGAGCGTGCGATCGAGGCGTGCCTGATCGACGCGAAGCTGCCGTACCGG CGGCTCGCGAACGTCGCCGCCGAAACCGCGGCGCTGCTCGCCGCGAACAGGATCGTCGGCTGGTTCCAGGGCCGCATGGA GTTCGGGCCGCGCGCGCTCGGCGCGCGCTCGATCCTCGCCTCGCCGATCGATCCCGGCATGCAGCAGCGGCTCAACACGA TCAAGGATCGCGAGGACTTTCGCCCCGTCGCGCCCGTCGTCATCGAGGAGAAGGCGTACCGCTGGTTCACCGGCGGCAAG CATGAACGCCTGCGCGCGCCGTTCATGCTGTTCGTCTACGACGTCGCGCCGGGCGCGCAGGCGCGGATTCCCGCGGTGCG GCACGTCGACGGCACCGCGCGCGTGCAGACCGTGAACCGCGCGCAGCATCCGCTCTATTACGACCTCCTGAACGAATTCG ACGCGCTGACGGGCGTGCCCGTGCTCGTCAACACGTCGTTCAACACGCGCGGCGAGCCGATCGTGCGCACGCCGCGCGAC GCGCTCGAGTGCTTCTGGACGTCGCCGCTCGATGCGCTCGTGATCGGCCCGTTTTTGCTGGAGAAGCCGCTATGA
Upstream 100 bases:
>100_bases GCCGCCCATGCCGCCCCCACGCGCCGCCGTCCCTTCAACCGCTTCGCCGCGCGCGGCGAACGTCGTTCCGATCACCTCCG CGACCGCAAGGACCTGACGC
Downstream 100 bases:
>100_bases ACGCACCGCACTGGAGGCCGCCGCCCGTCGTGTCGATCGTCGTGCCGACGTACCGGCGGCCGGAGCTGCTCGAACGCTGC CTCGGCGCGCTCGCGTCGCA
Product: carbamoyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 583
Protein sequence:
>584_residues MAKSRPPLYTLGINAAFHDSAACLVRDGAVVAAAEEERFTRIKHGKRPVPFSTWELPYHAIDYCLAEAGITLAEVAHVAY SYDPWQQIERDGREPTFTLPLSPSAHARANGHASPWEPLFLSYIVNAPRQLADGAPHHLRRRFRGVTPDGPFRWHFVEHH LSHEASAFLAAPFSHCAVLTMDGRGEKATTSYGVFDGHVYRRVGQVDLPHSLGLLYERVTRHLGFLHSSDEYKVMALASF GKPAFAHALRRLVRYVGDGRYETPALDLRELLGPPRERGARVEPRHCDIAHSLQAVLEEVVLEIVDWLAGATGEKRLAMA GGVALNCVMNAKIRDRGRFEDVWVQPAAGDAGTALGAALWTDFSERGERGGWRMDHAFLGPAYDERAIEACLIDAKLPYR RLANVAAETAALLAANRIVGWFQGRMEFGPRALGARSILASPIDPGMQQRLNTIKDREDFRPVAPVVIEEKAYRWFTGGK HERLRAPFMLFVYDVAPGAQARIPAVRHVDGTARVQTVNRAQHPLYYDLLNEFDALTGVPVLVNTSFNTRGEPIVRTPRD ALECFWTSPLDALVIGPFLLEKPL
Sequences:
>Translated_584_residues MAKSRPPLYTLGINAAFHDSAACLVRDGAVVAAAEEERFTRIKHGKRPVPFSTWELPYHAIDYCLAEAGITLAEVAHVAY SYDPWQQIERDGREPTFTLPLSPSAHARANGHASPWEPLFLSYIVNAPRQLADGAPHHLRRRFRGVTPDGPFRWHFVEHH LSHEASAFLAAPFSHCAVLTMDGRGEKATTSYGVFDGHVYRRVGQVDLPHSLGLLYERVTRHLGFLHSSDEYKVMALASF GKPAFAHALRRLVRYVGDGRYETPALDLRELLGPPRERGARVEPRHCDIAHSLQAVLEEVVLEIVDWLAGATGEKRLAMA GGVALNCVMNAKIRDRGRFEDVWVQPAAGDAGTALGAALWTDFSERGERGGWRMDHAFLGPAYDERAIEACLIDAKLPYR RLANVAAETAALLAANRIVGWFQGRMEFGPRALGARSILASPIDPGMQQRLNTIKDREDFRPVAPVVIEEKAYRWFTGGK HERLRAPFMLFVYDVAPGAQARIPAVRHVDGTARVQTVNRAQHPLYYDLLNEFDALTGVPVLVNTSFNTRGEPIVRTPRD ALECFWTSPLDALVIGPFLLEKPL >Mature_583_residues AKSRPPLYTLGINAAFHDSAACLVRDGAVVAAAEEERFTRIKHGKRPVPFSTWELPYHAIDYCLAEAGITLAEVAHVAYS YDPWQQIERDGREPTFTLPLSPSAHARANGHASPWEPLFLSYIVNAPRQLADGAPHHLRRRFRGVTPDGPFRWHFVEHHL SHEASAFLAAPFSHCAVLTMDGRGEKATTSYGVFDGHVYRRVGQVDLPHSLGLLYERVTRHLGFLHSSDEYKVMALASFG KPAFAHALRRLVRYVGDGRYETPALDLRELLGPPRERGARVEPRHCDIAHSLQAVLEEVVLEIVDWLAGATGEKRLAMAG GVALNCVMNAKIRDRGRFEDVWVQPAAGDAGTALGAALWTDFSERGERGGWRMDHAFLGPAYDERAIEACLIDAKLPYRR LANVAAETAALLAANRIVGWFQGRMEFGPRALGARSILASPIDPGMQQRLNTIKDREDFRPVAPVVIEEKAYRWFTGGKH ERLRAPFMLFVYDVAPGAQARIPAVRHVDGTARVQTVNRAQHPLYYDLLNEFDALTGVPVLVNTSFNTRGEPIVRTPRDA LECFWTSPLDALVIGPFLLEKPL
Specific function: Unknown
COG id: COG2192
COG function: function code O; Predicted carbamoyl transferase, NodU family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NodU/CmcH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003696 [H]
Pfam domain/function: PF02543 CmcH_NodU [H]
EC number: NA
Molecular weight: Translated: 64954; Mature: 64823
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSRPPLYTLGINAAFHDSAACLVRDGAVVAAAEEERFTRIKHGKRPVPFSTWELPYHA CCCCCCCEEEEECCCEECCCCEEEEECCEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHH IDYCLAEAGITLAEVAHVAYSYDPWQQIERDGREPTFTLPLSPSAHARANGHASPWEPLF HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHH LSYIVNAPRQLADGAPHHLRRRFRGVTPDGPFRWHFVEHHLSHEASAFLAAPFSHCAVLT HHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCEEEEHHHHHHCHHHHHHHCCCCCCEEEEE MDGRGEKATTSYGVFDGHVYRRVGQVDLPHSLGLLYERVTRHLGFLHSSDEYKVMALASF ECCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC GKPAFAHALRRLVRYVGDGRYETPALDLRELLGPPRERGARVEPRHCDIAHSLQAVLEEV CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHH VLEIVDWLAGATGEKRLAMAGGVALNCVMNAKIRDRGRFEDVWVQPAAGDAGTALGAALW HHHHHHHHHCCCCCCCEEECCCEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHH TDFSERGERGGWRMDHAFLGPAYDERAIEACLIDAKLPYRRLANVAAETAALLAANRIVG HCHHHHCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH WFQGRMEFGPRALGARSILASPIDPGMQQRLNTIKDREDFRPVAPVVIEEKAYRWFTGGK HHHHHHHCCCHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCEECCCCC HERLRAPFMLFVYDVAPGAQARIPAVRHVDGTARVQTVNRAQHPLYYDLLNEFDALTGVP CHHHCCCEEEEEEECCCCCCCCCCCCEECCCCHHEEEHHHCCCCHHHHHHHHHHHHCCCC VLVNTSFNTRGEPIVRTPRDALECFWTSPLDALVIGPFLLEKPL EEEECCCCCCCCCCEECCHHHHHHHHCCCHHHHHHHHHHHCCCC >Mature Secondary Structure AKSRPPLYTLGINAAFHDSAACLVRDGAVVAAAEEERFTRIKHGKRPVPFSTWELPYHA CCCCCCEEEEECCCEECCCCEEEEECCEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHH IDYCLAEAGITLAEVAHVAYSYDPWQQIERDGREPTFTLPLSPSAHARANGHASPWEPLF HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHH LSYIVNAPRQLADGAPHHLRRRFRGVTPDGPFRWHFVEHHLSHEASAFLAAPFSHCAVLT HHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCEEEEHHHHHHCHHHHHHHCCCCCCEEEEE MDGRGEKATTSYGVFDGHVYRRVGQVDLPHSLGLLYERVTRHLGFLHSSDEYKVMALASF ECCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC GKPAFAHALRRLVRYVGDGRYETPALDLRELLGPPRERGARVEPRHCDIAHSLQAVLEEV CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHH VLEIVDWLAGATGEKRLAMAGGVALNCVMNAKIRDRGRFEDVWVQPAAGDAGTALGAALW HHHHHHHHHCCCCCCCEEECCCEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHH TDFSERGERGGWRMDHAFLGPAYDERAIEACLIDAKLPYRRLANVAAETAALLAANRIVG HCHHHHCCCCCCCCCCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH WFQGRMEFGPRALGARSILASPIDPGMQQRLNTIKDREDFRPVAPVVIEEKAYRWFTGGK HHHHHHHCCCHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCEECCCCC HERLRAPFMLFVYDVAPGAQARIPAVRHVDGTARVQTVNRAQHPLYYDLLNEFDALTGVP CHHHCCCEEEEEEECCCCCCCCCCCCEECCCCHHEEEHHHCCCCHHHHHHHHHHHHCCCC VLVNTSFNTRGEPIVRTPRDALECFWTSPLDALVIGPFLLEKPL EEEECCCCCCCCCCEECCHHHHHHHHCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]