| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723225
Identifier: 53723225
GI number: 53723225
Start: 2977466
End: 2979592
Strand: Reverse
Name: 53723225
Synonym: BPSS2208
Alternate gene names: NA
Gene position: 2979592-2977466 (Counterclockwise)
Preceding gene: 53723228
Following gene: 53723223
Centisome position: 93.9
GC content: 68.5
Gene sequence:
>2127_bases ATGAAAAAAACGGACACGCGTGAAAAAAATGCGGCGGCGAAGCCCGATTCGCCGTCCAACATCGGCGAGTGCATTCGGCT GCCGTGCTCGGGGCAGTTTTACGTGCTCGAACGCGCGCTGAGCAAGCCGCGCGTGAGCGGCGCGTTCGACGGCATCGAGG CGGCGCTCGACGCGCAAACGGCGAAGTTCGCCGAACGCAACGCGGCGGCCGCGCGGGCGTTCGCGCAACTGCGCGTGCGC TGCGTGCGCGAGCAGCGCGCCGCTCTGCAGATCGACGGCGTCACGGTCGGCGCGACGCTGTCGTCGCTGACGCGATCGTT TCTCCGGCCTCCGTTGCTCGCGCCCGAGGCGGACGTGGCGGAAGCGCGCTTCGCCCACGTGCTGCTTGTCGAATTGACGC TGCACCCGGTCGGCAAGGACGAAGTCGACGCATACCTGTACGTTTATCGCGAGCTGGCGGACGATCCGCTCGACCACGGC CTGCGCGAGCATTGCACCGAGATCGAGACGCCGGCGTTCGTCGAGCCGTTCGTGCAGCCCGACGCGACGCGCATCGAGCG CATGAGCATGCGGATGATGGCGGCTTCGCGCGGCGAGGTCCGGCGCAAGACGATCGATGCGTACGACGTCGGCGCGACGA CGTCGAGCCTCGGCCTGCATCGGACCATCGCCGGCACGATGACGCTCGCGGTGCCGCACGGCGGCGGCACGCGGCGGTTC GACGTGTCGCCGCACCGGCAGCGCGTGCGCGCCGGCACGTCGCGGCTGCCGCTCGACAAGGTGATCCATTGGGCGTCGGA GCGCGCGGTCGGGTTCAGCCGATCGAGCACCGCCACCGCGACGTCCTCGGCGTTTCTCTCGCAGTTCGCGCGGCCGATCG CGCGCCTGCTCGACAAGACGCCGTCGAGCGTGCTGATCGAGCGGCGCGCGTTCGCCGAGGCGATCGACGAATACGCGAGG CTCACCGGCCTCGCGTGGGTGGCCGGACGTGGCGCGCCCCAGGCATGGAAGACGGTCGACGACGTGCTCGACGCCCTCGG CGACACGTTCGTCGTCGATGGGCAGGCGCTCGACGGCAGCGGCGCGCCGCTTGACCGGAGCCGGCCATTTGCCGAAGTGT GCTATCGCTCGAGGGCGCCGTCGATTCCGGGCTTGAAGTCGACCGATGCCGTCAGGCTGAAAGTCGGCAGCCGGACCTGC AAGATCGTGCTGCCGTCGGCGGTCGGTCACATGGGCGGCGCAAAGGACGCGCAGCGCCGCGGGCTGGGCGAGATCCTGAA CCGGAGCCGCGCGTTCCGGGCCGTGTTCGACGGCGGGCGCGTGCTGTTCTGCTCGGAAGGCGCTTACGGAAGCGACGACC TGGCGCTCGCGACCACGCAGCTCGCGAGCATTTTCCGCAGCGTCGCCGCGCTCGGCGACGTGCATTCGGAGAAGGGCAAG ACGCACGAGCACGCGACATCGTTTCAAGCGCAGAGCTGTTTTCACGTCATCGAGACCGAACGCGCGCTCGCCCATCCCGA TTCGGCGCTGATCTGCGACGACTCGACCGTCGAATGGGCCGACTATATCGAGCTGGACAGCGCCGCGCCGCGCATTCGCT GGATGCACGCGAAAGTGCAGAAGGTCGCGTCGGAGGCGGCGAAGCGGGCCAGGCAAGACAAGACGACGTTGCCGCCTCAC GTCAGCCCGACGGTCGCCGTGCGCCATAGCCCGTCGCTCAGCGCATCGGATCTGGAGGAGGTGGTCGGGCAGGCGATCAA GAATCTGGCGCGGCTGCGCCTGCGCACGAGCGACCCGGAATTTTCCGGGCGGCACAATACATGGATGTCGGAAACCTGCG CGCTGCCGAGCAAGAGCCGCATCGCGCGTTTGCGCCGCCTCGGAGGGCTGCGGCGCAAGGCCGACATCGAGGCGCGCTTC GACGCCGCGGCGATCGATCCGCACGCGGTCTACGAAGTGGCGATCGTCGTGCCGAACTATTCGAAGACGCAAGTCGAAAG CGAGCTCGCGAAGATCGCGACGGGCGACGCGCAGCCTTCGGTGTTGCAGATGTTCTGGCTGCTGAGCGGCTTCATGCACG CGTGCCTCGAAGTGGGCGCGAAGCCGCTCGTGTTCATGCACGCTTAG
Upstream 100 bases:
>100_bases TCACCGGTTCGAATCGAGATCGAATCGAGAAAAAAACAGAAGCGACCGATCCGCGCGGCACGGACCCGCGCGGGCGAAAG CGCGCACGGGGCGAACGAGG
Downstream 100 bases:
>100_bases GGCGCGCGCGTGGGGTATGCGTGGGCCGTGCGGCGCGCGAGCGCGGAACGCGCGCGCCGGGCTCGCGCGCCGGCGCGATG CGTCTGCCGCGAGGCCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 708; Mature: 708
Protein sequence:
>708_residues MKKTDTREKNAAAKPDSPSNIGECIRLPCSGQFYVLERALSKPRVSGAFDGIEAALDAQTAKFAERNAAAARAFAQLRVR CVREQRAALQIDGVTVGATLSSLTRSFLRPPLLAPEADVAEARFAHVLLVELTLHPVGKDEVDAYLYVYRELADDPLDHG LREHCTEIETPAFVEPFVQPDATRIERMSMRMMAASRGEVRRKTIDAYDVGATTSSLGLHRTIAGTMTLAVPHGGGTRRF DVSPHRQRVRAGTSRLPLDKVIHWASERAVGFSRSSTATATSSAFLSQFARPIARLLDKTPSSVLIERRAFAEAIDEYAR LTGLAWVAGRGAPQAWKTVDDVLDALGDTFVVDGQALDGSGAPLDRSRPFAEVCYRSRAPSIPGLKSTDAVRLKVGSRTC KIVLPSAVGHMGGAKDAQRRGLGEILNRSRAFRAVFDGGRVLFCSEGAYGSDDLALATTQLASIFRSVAALGDVHSEKGK THEHATSFQAQSCFHVIETERALAHPDSALICDDSTVEWADYIELDSAAPRIRWMHAKVQKVASEAAKRARQDKTTLPPH VSPTVAVRHSPSLSASDLEEVVGQAIKNLARLRLRTSDPEFSGRHNTWMSETCALPSKSRIARLRRLGGLRRKADIEARF DAAAIDPHAVYEVAIVVPNYSKTQVESELAKIATGDAQPSVLQMFWLLSGFMHACLEVGAKPLVFMHA
Sequences:
>Translated_708_residues MKKTDTREKNAAAKPDSPSNIGECIRLPCSGQFYVLERALSKPRVSGAFDGIEAALDAQTAKFAERNAAAARAFAQLRVR CVREQRAALQIDGVTVGATLSSLTRSFLRPPLLAPEADVAEARFAHVLLVELTLHPVGKDEVDAYLYVYRELADDPLDHG LREHCTEIETPAFVEPFVQPDATRIERMSMRMMAASRGEVRRKTIDAYDVGATTSSLGLHRTIAGTMTLAVPHGGGTRRF DVSPHRQRVRAGTSRLPLDKVIHWASERAVGFSRSSTATATSSAFLSQFARPIARLLDKTPSSVLIERRAFAEAIDEYAR LTGLAWVAGRGAPQAWKTVDDVLDALGDTFVVDGQALDGSGAPLDRSRPFAEVCYRSRAPSIPGLKSTDAVRLKVGSRTC KIVLPSAVGHMGGAKDAQRRGLGEILNRSRAFRAVFDGGRVLFCSEGAYGSDDLALATTQLASIFRSVAALGDVHSEKGK THEHATSFQAQSCFHVIETERALAHPDSALICDDSTVEWADYIELDSAAPRIRWMHAKVQKVASEAAKRARQDKTTLPPH VSPTVAVRHSPSLSASDLEEVVGQAIKNLARLRLRTSDPEFSGRHNTWMSETCALPSKSRIARLRRLGGLRRKADIEARF DAAAIDPHAVYEVAIVVPNYSKTQVESELAKIATGDAQPSVLQMFWLLSGFMHACLEVGAKPLVFMHA >Mature_708_residues MKKTDTREKNAAAKPDSPSNIGECIRLPCSGQFYVLERALSKPRVSGAFDGIEAALDAQTAKFAERNAAAARAFAQLRVR CVREQRAALQIDGVTVGATLSSLTRSFLRPPLLAPEADVAEARFAHVLLVELTLHPVGKDEVDAYLYVYRELADDPLDHG LREHCTEIETPAFVEPFVQPDATRIERMSMRMMAASRGEVRRKTIDAYDVGATTSSLGLHRTIAGTMTLAVPHGGGTRRF DVSPHRQRVRAGTSRLPLDKVIHWASERAVGFSRSSTATATSSAFLSQFARPIARLLDKTPSSVLIERRAFAEAIDEYAR LTGLAWVAGRGAPQAWKTVDDVLDALGDTFVVDGQALDGSGAPLDRSRPFAEVCYRSRAPSIPGLKSTDAVRLKVGSRTC KIVLPSAVGHMGGAKDAQRRGLGEILNRSRAFRAVFDGGRVLFCSEGAYGSDDLALATTQLASIFRSVAALGDVHSEKGK THEHATSFQAQSCFHVIETERALAHPDSALICDDSTVEWADYIELDSAAPRIRWMHAKVQKVASEAAKRARQDKTTLPPH VSPTVAVRHSPSLSASDLEEVVGQAIKNLARLRLRTSDPEFSGRHNTWMSETCALPSKSRIARLRRLGGLRRKADIEARF DAAAIDPHAVYEVAIVVPNYSKTQVESELAKIATGDAQPSVLQMFWLLSGFMHACLEVGAKPLVFMHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77069; Mature: 77069
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTDTREKNAAAKPDSPSNIGECIRLPCSGQFYVLERALSKPRVSGAFDGIEAALDAQT CCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH AKFAERNAAAARAFAQLRVRCVREQRAALQIDGVTVGATLSSLTRSFLRPPLLAPEADVA HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCEEEHHHHHHHHHHHHCCCCCCCCCCHH EARFAHVLLVELTLHPVGKDEVDAYLYVYRELADDPLDHGLREHCTEIETPAFVEPFVQP HHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCCCCCC DATRIERMSMRMMAASRGEVRRKTIDAYDVGATTSSLGLHRTIAGTMTLAVPHGGGTRRF CHHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCCHHHCCHHHEECCEEEEEEECCCCCEEE DVSPHRQRVRAGTSRLPLDKVIHWASERAVGFSRSSTATATSSAFLSQFARPIARLLDKT CCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PSSVLIERRAFAEAIDEYARLTGLAWVAGRGAPQAWKTVDDVLDALGDTFVVDGQALDGS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEECCCEECCC GAPLDRSRPFAEVCYRSRAPSIPGLKSTDAVRLKVGSRTCKIVLPSAVGHMGGAKDAQRR CCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECHHHCCCCCCCHHHHC GLGEILNRSRAFRAVFDGGRVLFCSEGAYGSDDLALATTQLASIFRSVAALGDVHSEKGK CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC THEHATSFQAQSCFHVIETERALAHPDSALICDDSTVEWADYIELDSAAPRIRWMHAKVQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHH KVASEAAKRARQDKTTLPPHVSPTVAVRHSPSLSASDLEEVVGQAIKNLARLRLRTSDPE HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC FSGRHNTWMSETCALPSKSRIARLRRLGGLRRKADIEARFDAAAIDPHAVYEVAIVVPNY CCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHCCCHHHCCCCCCCCHHEEEEEEEECCC SKTQVESELAKIATGDAQPSVLQMFWLLSGFMHACLEVGAKPLVFMHA CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MKKTDTREKNAAAKPDSPSNIGECIRLPCSGQFYVLERALSKPRVSGAFDGIEAALDAQT CCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH AKFAERNAAAARAFAQLRVRCVREQRAALQIDGVTVGATLSSLTRSFLRPPLLAPEADVA HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCEEEHHHHHHHHHHHHCCCCCCCCCCHH EARFAHVLLVELTLHPVGKDEVDAYLYVYRELADDPLDHGLREHCTEIETPAFVEPFVQP HHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCCCCCC DATRIERMSMRMMAASRGEVRRKTIDAYDVGATTSSLGLHRTIAGTMTLAVPHGGGTRRF CHHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCCHHHCCHHHEECCEEEEEEECCCCCEEE DVSPHRQRVRAGTSRLPLDKVIHWASERAVGFSRSSTATATSSAFLSQFARPIARLLDKT CCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PSSVLIERRAFAEAIDEYARLTGLAWVAGRGAPQAWKTVDDVLDALGDTFVVDGQALDGS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEECCCEECCC GAPLDRSRPFAEVCYRSRAPSIPGLKSTDAVRLKVGSRTCKIVLPSAVGHMGGAKDAQRR CCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECHHHCCCCCCCHHHHC GLGEILNRSRAFRAVFDGGRVLFCSEGAYGSDDLALATTQLASIFRSVAALGDVHSEKGK CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC THEHATSFQAQSCFHVIETERALAHPDSALICDDSTVEWADYIELDSAAPRIRWMHAKVQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHH KVASEAAKRARQDKTTLPPHVSPTVAVRHSPSLSASDLEEVVGQAIKNLARLRLRTSDPE HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC FSGRHNTWMSETCALPSKSRIARLRRLGGLRRKADIEARFDAAAIDPHAVYEVAIVVPNY CCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHCCCHHHCCCCCCCCHHEEEEEEEECCC SKTQVESELAKIATGDAQPSVLQMFWLLSGFMHACLEVGAKPLVFMHA CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA