| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723183
Identifier: 53723183
GI number: 53723183
Start: 2930811
End: 2932001
Strand: Reverse
Name: 53723183
Synonym: BPSS2167
Alternate gene names: NA
Gene position: 2932001-2930811 (Counterclockwise)
Preceding gene: 53723189
Following gene: 53723180
Centisome position: 92.4
GC content: 72.71
Gene sequence:
>1191_bases ATGACGCTCATCGTCGTGTTTCTGCTGTCTTGCCTGTCGCTCGTGATCTGGCTCGTGCTGCTGTTCGGGCGCGGCGGCTT CTGGCGCGCGCGTGCCGCGCGGCGGCTGCCGCCCGACGCGCGCGGCGCGGCCGCGGCCGCCGGCTGGCCGGCCGTCGCGG CCGTCGTGCCCGCCCGCAACGAGGCGGACGTGATCGGCGAGGCGGTTCGCTCGCTCGTCGAGCAAGCGTACGAAGGCGCG TTTCACCTGATCGTCGTCGACGACCACAGCACCGACGGCACCGCCGAGGCCGCGCGCGCGGCCTCGGCGGCCGTCGGCTG CGCCGACCGGCTGACCGTGCTCGCCGCGCAGCCGCTGCCCGCCGGCTGGTCGGGCAAGGTGTGGGCGCAGTCGCAGGGGA TCGCCGCGGTGCGCTCGCTCGGGCTGCCCGCCGACTACCTGCTGCTGACGGACGCCGACATCGGTCATCCGCCGGACGCG GTCGCGCAGCTCGTCACGCGCGCGCAGGCGGAGCAGCGCGATCTCGTATCGCTGATGGTGCGGCTGCGCTGCGATTCGTT CTGGGAAAAGGCGCTGATTCCGGCGTTCGTGTTCTTCTTCGCGAAGCTCTACCCGTTCTCGTGGATCAACGATCCGCGCA ACCGGACGGCGGGCGCGGCGGGCGGCTGCATGCTCGTGCGCCGCGACGCGCTCGAGGAGGCGGGCGGCATCGAATCGATC CGCGGCGCGCTGATCGACGATTGCAGCCTGGCCGCGCAGATCAAGCACCGCGGCGCCGGCCGCCACCCGATCCGGCTCGA TCTCGCCGATCGCAGCGTGTCGTTGCGGCCGTACGACAGCTGGCGCGACATCTGGAACATGATCGCGCGCACCGCGTTCA CGCAGCTGCGGTATTCGCCGGTGCTGCTGCTCGGCACGCTCGTCGGGATGACGATCCTCTACCTGGTGCCGCCCGTCGCC GCGCTCGCGTACGGCGCGCGCGCGTGGCCGGCATGGCTCGCGTGGGCGTCGATGTGCACCGCGTATGCGCCGATGCTCAG CTACTACCGCCGCTCGCCGTGGTGGGCGCCGGCGCTGCCGCTCGTCGCGCTGTTCTATGTCGGCGCGACGTTCGCGTCGG CCGTGCGCTACTGGCGCGGCAAGGGCGGACAGTGGAAGGCGCGCGTGCAGGCGCCGGTGCGGGATCGTTGA
Upstream 100 bases:
>100_bases GCATGGAAGTCGATCGTAACGAAACGCGCGCGGCGGCGTGCGCGGCCGCCCGGCCGGACGGTGCGCCGGGCGGCCGCGAC GCACGGGCGGAGGGCTGCGC
Downstream 100 bases:
>100_bases GTGTCGGGCGATCGGTTGATTGGCTGATTGGCTGATCGGCGGGCGCCGGCGTTCGCCGGAGAGCGGGGCGGGCCCGCGGC GCGATTCGGTCGCTGTCCCT
Product: glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase; Hopene-Associated Glycosyltransferase HpnB; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase; Integral Membrane Protein; HpnB Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferase Involved In Cell Wall Biogenesis; TPR Domain-Containing Protein; Glycosyl Transferase Domain-Containing Protein; Squalene-Phytoene Synthase
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTLIVVFLLSCLSLVIWLVLLFGRGGFWRARAARRLPPDARGAAAAAGWPAVAAVVPARNEADVIGEAVRSLVEQAYEGA FHLIVVDDHSTDGTAEAARAASAAVGCADRLTVLAAQPLPAGWSGKVWAQSQGIAAVRSLGLPADYLLLTDADIGHPPDA VAQLVTRAQAEQRDLVSLMVRLRCDSFWEKALIPAFVFFFAKLYPFSWINDPRNRTAGAAGGCMLVRRDALEEAGGIESI RGALIDDCSLAAQIKHRGAGRHPIRLDLADRSVSLRPYDSWRDIWNMIARTAFTQLRYSPVLLLGTLVGMTILYLVPPVA ALAYGARAWPAWLAWASMCTAYAPMLSYYRRSPWWAPALPLVALFYVGATFASAVRYWRGKGGQWKARVQAPVRDR
Sequences:
>Translated_396_residues MTLIVVFLLSCLSLVIWLVLLFGRGGFWRARAARRLPPDARGAAAAAGWPAVAAVVPARNEADVIGEAVRSLVEQAYEGA FHLIVVDDHSTDGTAEAARAASAAVGCADRLTVLAAQPLPAGWSGKVWAQSQGIAAVRSLGLPADYLLLTDADIGHPPDA VAQLVTRAQAEQRDLVSLMVRLRCDSFWEKALIPAFVFFFAKLYPFSWINDPRNRTAGAAGGCMLVRRDALEEAGGIESI RGALIDDCSLAAQIKHRGAGRHPIRLDLADRSVSLRPYDSWRDIWNMIARTAFTQLRYSPVLLLGTLVGMTILYLVPPVA ALAYGARAWPAWLAWASMCTAYAPMLSYYRRSPWWAPALPLVALFYVGATFASAVRYWRGKGGQWKARVQAPVRDR >Mature_395_residues TLIVVFLLSCLSLVIWLVLLFGRGGFWRARAARRLPPDARGAAAAAGWPAVAAVVPARNEADVIGEAVRSLVEQAYEGAF HLIVVDDHSTDGTAEAARAASAAVGCADRLTVLAAQPLPAGWSGKVWAQSQGIAAVRSLGLPADYLLLTDADIGHPPDAV AQLVTRAQAEQRDLVSLMVRLRCDSFWEKALIPAFVFFFAKLYPFSWINDPRNRTAGAAGGCMLVRRDALEEAGGIESIR GALIDDCSLAAQIKHRGAGRHPIRLDLADRSVSLRPYDSWRDIWNMIARTAFTQLRYSPVLLLGTLVGMTILYLVPPVAA LAYGARAWPAWLAWASMCTAYAPMLSYYRRSPWWAPALPLVALFYVGATFASAVRYWRGKGGQWKARVQAPVRDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43139; Mature: 43008
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIVVFLLSCLSLVIWLVLLFGRGGFWRARAARRLPPDARGAAAAAGWPAVAAVVPARN CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHEEECCCC EADVIGEAVRSLVEQAYEGAFHLIVVDDHSTDGTAEAARAASAAVGCADRLTVLAAQPLP HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCC AGWSGKVWAQSQGIAAVRSLGLPADYLLLTDADIGHPPDAVAQLVTRAQAEQRDLVSLMV CCCCCCEEECCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RLRCDSFWEKALIPAFVFFFAKLYPFSWINDPRNRTAGAAGGCMLVRRDALEEAGGIESI HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH RGALIDDCSLAAQIKHRGAGRHPIRLDLADRSVSLRPYDSWRDIWNMIARTAFTQLRYSP HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCH VLLLGTLVGMTILYLVPPVAALAYGARAWPAWLAWASMCTAYAPMLSYYRRSPWWAPALP HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LVALFYVGATFASAVRYWRGKGGQWKARVQAPVRDR HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure TLIVVFLLSCLSLVIWLVLLFGRGGFWRARAARRLPPDARGAAAAAGWPAVAAVVPARN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHEEECCCC EADVIGEAVRSLVEQAYEGAFHLIVVDDHSTDGTAEAARAASAAVGCADRLTVLAAQPLP HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCC AGWSGKVWAQSQGIAAVRSLGLPADYLLLTDADIGHPPDAVAQLVTRAQAEQRDLVSLMV CCCCCCEEECCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RLRCDSFWEKALIPAFVFFFAKLYPFSWINDPRNRTAGAAGGCMLVRRDALEEAGGIESI HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH RGALIDDCSLAAQIKHRGAGRHPIRLDLADRSVSLRPYDSWRDIWNMIARTAFTQLRYSP HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCH VLLLGTLVGMTILYLVPPVAALAYGARAWPAWLAWASMCTAYAPMLSYYRRSPWWAPALP HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LVALFYVGATFASAVRYWRGKGGQWKARVQAPVRDR HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA