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The map label for this gene is omp32 [H]

Identifier: 53723082

GI number: 53723082

Start: 2798378

End: 2799457

Strand: Reverse

Name: omp32 [H]

Synonym: BPSS2064

Alternate gene names: 53723082

Gene position: 2799457-2798378 (Counterclockwise)

Preceding gene: 53723083

Following gene: 53723081

Centisome position: 88.23

GC content: 57.69

Gene sequence:

>1080_bases
ATGCAAATGAAAAAAGTTATGCTCGCAACATGGCTGTTGGCCATCGGAGGCTTCGCACAGGCCCAAAGCAGCGTCACCCT
GTATGGCCGGATCGATACAGGCCTCGAATATATGAGCGGACTTACGAATGGCAGTGGCCGAAGCGTTTCGCGCTTGCGTG
CGGAAAGCGGTGACTGGGGCACCGGCATGTTTGGTCTCAAGGGTGTTGAGGATATTGGCGGCGGCACCAAGGTCATTTTC
CAGCTCGAAGGCGGCCTCAATTCCATGGTCGGCCAAGTCGGCAGTGGCACCACGATATTCAATCGCTGGGCGTACGTGGG
GGTACAGAACGATACGTACGGTACGCTCACCGCAGGTCGTATGTTGTGGATCTCAAATGGTCTGTGGGACTTCGACCCAC
TTGGACAAACGGCGTGGTCGTCGGCGTCGCTCGTGCGCGGCCGCAACTGGCAAGCAAGCAGCAATAACATCGCATATCAG
TCGCCGAAATGGGGCGGATTCGATGTGGCCGGCCAATACGCCCTGTCCAACTCGACGAACTGGAATGCAGGGGGGGCTAA
TGGGCAGGGCCGCTCCGTCGGTCTTCAGGCAACCTATACCTCTGCGTTTTTCCAGGTCCGCGGCATTTACGACGAGCTTC
GTAATCCGACCACGGGACAGTTTGACGATGTGTTCAACTACTCACGTGAATACTTCGGCGGGTTGAATGTGTTCCTTGGT
CCGTTCAAGCTGCAGGCAGCATATCAGGCATCGCAAGCCAGCCAGGCCCCAGCAGGCGCGCCGACGAGGACCCAACTGGA
GTGGGGCGGACTTGCATGGCAAGCCACGCCGGCGGTGGCATTGATCGGCGCCGTCTATCACGTGAACGCGAATAACGGCG
GCGGCAATGCGACAATCTACACGATCGCCGGCAGCTACAATCTGTCAAAGCGCACACTGTTGAATGTGCAGGTGGCAACG
GCACGCAATAGCAGGAACGCGAACTTTTCACTTGAAGCGAACGGGCCAACCAGTTCAGACAACCCACTCCCTGGCCACAG
CCAGTCCGGAATCTATGCGGGGATTCAACATGCTTTCTGA

Upstream 100 bases:

>100_bases
CTACCTGGAGTCGTCTGTCTTGTGATTCAACGCTCCGATCTTTATGAGCCGATCGTCTGCAAATAAATATGTAGTACGAA
TCATTTTTGCGCAACAGGAG

Downstream 100 bases:

>100_bases
CCAAAGCGGCTACTCCTACGCAGCTCATCTCGCTTTACGAGTAAGCAGTATTCCTGAATAACTGAAGAACCGCCGTGCGA
GGCACCATTTTGCCGTTTGA

Product: porin protein

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MQMKKVMLATWLLAIGGFAQAQSSVTLYGRIDTGLEYMSGLTNGSGRSVSRLRAESGDWGTGMFGLKGVEDIGGGTKVIF
QLEGGLNSMVGQVGSGTTIFNRWAYVGVQNDTYGTLTAGRMLWISNGLWDFDPLGQTAWSSASLVRGRNWQASSNNIAYQ
SPKWGGFDVAGQYALSNSTNWNAGGANGQGRSVGLQATYTSAFFQVRGIYDELRNPTTGQFDDVFNYSREYFGGLNVFLG
PFKLQAAYQASQASQAPAGAPTRTQLEWGGLAWQATPAVALIGAVYHVNANNGGGNATIYTIAGSYNLSKRTLLNVQVAT
ARNSRNANFSLEANGPTSSDNPLPGHSQSGIYAGIQHAF

Sequences:

>Translated_359_residues
MQMKKVMLATWLLAIGGFAQAQSSVTLYGRIDTGLEYMSGLTNGSGRSVSRLRAESGDWGTGMFGLKGVEDIGGGTKVIF
QLEGGLNSMVGQVGSGTTIFNRWAYVGVQNDTYGTLTAGRMLWISNGLWDFDPLGQTAWSSASLVRGRNWQASSNNIAYQ
SPKWGGFDVAGQYALSNSTNWNAGGANGQGRSVGLQATYTSAFFQVRGIYDELRNPTTGQFDDVFNYSREYFGGLNVFLG
PFKLQAAYQASQASQAPAGAPTRTQLEWGGLAWQATPAVALIGAVYHVNANNGGGNATIYTIAGSYNLSKRTLLNVQVAT
ARNSRNANFSLEANGPTSSDNPLPGHSQSGIYAGIQHAF
>Mature_359_residues
MQMKKVMLATWLLAIGGFAQAQSSVTLYGRIDTGLEYMSGLTNGSGRSVSRLRAESGDWGTGMFGLKGVEDIGGGTKVIF
QLEGGLNSMVGQVGSGTTIFNRWAYVGVQNDTYGTLTAGRMLWISNGLWDFDPLGQTAWSSASLVRGRNWQASSNNIAYQ
SPKWGGFDVAGQYALSNSTNWNAGGANGQGRSVGLQATYTSAFFQVRGIYDELRNPTTGQFDDVFNYSREYFGGLNVFLG
PFKLQAAYQASQASQAPAGAPTRTQLEWGGLAWQATPAVALIGAVYHVNANNGGGNATIYTIAGSYNLSKRTLLNVQVAT
ARNSRNANFSLEANGPTSSDNPLPGHSQSGIYAGIQHAF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38205; Mature: 38205

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMKKVMLATWLLAIGGFAQAQSSVTLYGRIDTGLEYMSGLTNGSGRSVSRLRAESGDWG
CCHHHHHHHHHHHHHCCHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCHHHHHCCCCCCC
TGMFGLKGVEDIGGGTKVIFQLEGGLNSMVGQVGSGTTIFNRWAYVGVQNDTYGTLTAGR
CCCCCCCCHHHCCCCEEEEEEECCCHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEECCE
MLWISNGLWDFDPLGQTAWSSASLVRGRNWQASSNNIAYQSPKWGGFDVAGQYALSNSTN
EEEEECCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCC
WNAGGANGQGRSVGLQATYTSAFFQVRGIYDELRNPTTGQFDDVFNYSREYFGGLNVFLG
CCCCCCCCCCCEEEEEEEHHHHHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEC
PFKLQAAYQASQASQAPAGAPTRTQLEWGGLAWQATPAVALIGAVYHVNANNGGGNATIY
CEEEEHHHHHHHCCCCCCCCCCCEEEEECCEEEECCCHHEEEEEEEEEECCCCCCCEEEE
TIAGSYNLSKRTLLNVQVATARNSRNANFSLEANGPTSSDNPLPGHSQSGIYAGIQHAF
EEECCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEHHCCCC
>Mature Secondary Structure
MQMKKVMLATWLLAIGGFAQAQSSVTLYGRIDTGLEYMSGLTNGSGRSVSRLRAESGDWG
CCHHHHHHHHHHHHHCCHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCHHHHHCCCCCCC
TGMFGLKGVEDIGGGTKVIFQLEGGLNSMVGQVGSGTTIFNRWAYVGVQNDTYGTLTAGR
CCCCCCCCHHHCCCCEEEEEEECCCHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEECCE
MLWISNGLWDFDPLGQTAWSSASLVRGRNWQASSNNIAYQSPKWGGFDVAGQYALSNSTN
EEEEECCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCC
WNAGGANGQGRSVGLQATYTSAFFQVRGIYDELRNPTTGQFDDVFNYSREYFGGLNVFLG
CCCCCCCCCCCEEEEEEEHHHHHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEC
PFKLQAAYQASQASQAPAGAPTRTQLEWGGLAWQATPAVALIGAVYHVNANNGGGNATIY
CEEEEHHHHHHHCCCCCCCCCCCEEEEECCEEEECCCHHEEEEEEEEEECCCCCCCEEEE
TIAGSYNLSKRTLLNVQVATARNSRNANFSLEANGPTSSDNPLPGHSQSGIYAGIQHAF
EEECCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]