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The map label for this gene is yjgF [C]

Identifier: 53723076

GI number: 53723076

Start: 2793355

End: 2793765

Strand: Reverse

Name: yjgF [C]

Synonym: BPSS2059

Alternate gene names: 53723076

Gene position: 2793765-2793355 (Counterclockwise)

Preceding gene: 53723077

Following gene: 53723075

Centisome position: 88.05

GC content: 59.12

Gene sequence:

>411_bases
ATGTCTATCCAAGCCCAAACTTCTGCCATTACCTGTGCCAATGCCCCCGACATTCCCCCGCCGGCCGGACACTACTCTCA
CGTCTGCGTTGCGAACGGATTTGTGTTCGTCTCAGGTCAGTTGCCGATCGACCCCACTGGAAAGCCGCTAAGTGACGCGC
CCTTCGACGCGCAGGCGAAGCAGGTCCTGCATAACGTGGACGCGACGTTAAAGGCTGCTGGCGTCACGCGCGACGATCTG
GTTCAAGTTCGGGTGTTCGTGTCGGACATCGAGCACTGGCCCATTTTCAACGGGCTTTATGCCGAGTGGATCGGCGCTCA
CAAGCCAGCTCGAGCTGTAGCGGAGTCCGCATCCTTGCATTACGGCTCAGCCGTCGAAGTGGAAGCCATCGCTTTGGCCT
CCGCCATTTGA

Upstream 100 bases:

>100_bases
GCGGGTCGCCTGCAACGGCGACTTGCCAACTTTTCTCAGGCGTCCTTCGCTGCTGCAAACGCCCCAATCAGGCGCCGAGC
CATCACTCAGGAATCAACGA

Downstream 100 bases:

>100_bases
TGTACAAGACATAGAAGGGACGCCATGACGAAAAAGTGGAAGCTTACCCATTGGATCATGCTCGGCATGATCCTCGGTAT
CGTCGTAGGCTACGCCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSIQAQTSAITCANAPDIPPPAGHYSHVCVANGFVFVSGQLPIDPTGKPLSDAPFDAQAKQVLHNVDATLKAAGVTRDDL
VQVRVFVSDIEHWPIFNGLYAEWIGAHKPARAVAESASLHYGSAVEVEAIALASAI

Sequences:

>Translated_136_residues
MSIQAQTSAITCANAPDIPPPAGHYSHVCVANGFVFVSGQLPIDPTGKPLSDAPFDAQAKQVLHNVDATLKAAGVTRDDL
VQVRVFVSDIEHWPIFNGLYAEWIGAHKPARAVAESASLHYGSAVEVEAIALASAI
>Mature_135_residues
SIQAQTSAITCANAPDIPPPAGHYSHVCVANGFVFVSGQLPIDPTGKPLSDAPFDAQAKQVLHNVDATLKAAGVTRDDLV
QVRVFVSDIEHWPIFNGLYAEWIGAHKPARAVAESASLHYGSAVEVEAIALASAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=114, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI87082396, Length=118, Percent_Identity=35.5932203389831, Blast_Score=67, Evalue=5e-13,
Organism=Escherichia coli, GI87082213, Length=121, Percent_Identity=33.0578512396694, Blast_Score=64, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25148896, Length=136, Percent_Identity=32.3529411764706, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71982075, Length=136, Percent_Identity=32.3529411764706, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71982068, Length=136, Percent_Identity=32.3529411764706, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322138, Length=114, Percent_Identity=39.4736842105263, Blast_Score=89, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6320899, Length=100, Percent_Identity=39, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14299; Mature: 14168

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQAQTSAITCANAPDIPPPAGHYSHVCVANGFVFVSGQLPIDPTGKPLSDAPFDAQAK
CCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHH
QVLHNVDATLKAAGVTRDDLVQVRVFVSDIEHWPIFNGLYAEWIGAHKPARAVAESASLH
HHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHCCCC
YGSAVEVEAIALASAI
CCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SIQAQTSAITCANAPDIPPPAGHYSHVCVANGFVFVSGQLPIDPTGKPLSDAPFDAQAK
CCCCCCCEEEECCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHH
QVLHNVDATLKAAGVTRDDLVQVRVFVSDIEHWPIFNGLYAEWIGAHKPARAVAESASLH
HHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHCCCC
YGSAVEVEAIALASAI
CCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]