Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

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The map label for this gene is 53723073

Identifier: 53723073

GI number: 53723073

Start: 2787212

End: 2789416

Strand: Reverse

Name: 53723073

Synonym: BPSS2056

Alternate gene names: NA

Gene position: 2789416-2787212 (Counterclockwise)

Preceding gene: 53723074

Following gene: 53723072

Centisome position: 87.91

GC content: 64.22

Gene sequence:

>2205_bases
GTGAGTCGCGTATTCACACTCGACAGCCCGCACGGCGACGGCCTGAAATTCCACACGCTCGACGGCAGCGACGAGCTTGG
CCGGCTGTTCGAATTCCGGATCGAGGCGCTCGCCGACAGTCACAGCCTGTCGCTGAAGGACCTGCTCGGCAAGCCCGTCA
CCGTCCGGATCGAACAGCAGGGCCAGTCGACGCGCTACCTGAACGGCATCGTTGCGCGCGCATCGCTTGCCGGCCGGCGT
GCCGAGCGGTACTACGGCTACGAGCTGCTCGTGCGGCCATGGCTGTGGCTCGCGACGCGTCGCTCCGATTGCCGGATATT
CCAGAACAAGACCGTGCCCGAGATCGTGCAGGAGGTGCTGTCGACGTACGGCTTTCCGATCGAGAACCACCTCGCCGAAT
CGTATGTGCCGCGCGAGTATTGCGTGCAGTACAACGGGACCGATGCCGCGTTCGTGTCGCGGCTGATGGAATTCGAGGGC
ATCTACTACTGGTTCCGGCATGCCGAGGACACGCATACGCTGATGCTGAGCGACGCGATGTCGTCGCATACGGCGCTGCC
CGGCTACGAAACGATTCCGTACATCGCGCGCGACCGCACCGTGATCGCCGACGTGGAACATATCGACGGCTGGCTGCCCG
CGCGGCAGGTGAGCGTCGGCAAGCATCAGACCACCGACTACGACTACACGAAACCACGCGCCGATCTGTCGTCGCAGAAG
GTCGATCCGCGCGGCCACGATCACGACAGCTTCGCGTCGTTCGAATGGCAGGGCGGCTATCGCGACGATGCGCCCGGCGC
GCACTACAGCCGCGTGCGGCTCGAAGAACAGCAGGCCGAGCACGAACGCGCGAGCGCCGATACGGATGTGCGCGGCGCCG
CGCCGGGGTATCTGTTCACGCTCGCGCATTGCCCGCGCGCCGACCGGAACCGCGAATACCTGATCGTGCGGTGCCAGTAC
CGTTTTCAGGAGAACGCCTATGCGAGCGATCAGGGCACGGAGGCTGTGGTGCATCAGACGATGATGCTCGTGCGGCCGTC
GAGTTTGCCTTATCGGCCGCCGCGTGAGACGCCGAGACCGCGGACCAACGAGCCGCAGACGGCGACCGTTGTCGGGCCGC
CCGGTGAGGAAATCTGGACCGATCAGTACGGGCGCGTGAAGCTGCAGTTTCGCTGGGACAGGTATGGGCAGAGCAACCAG
GATTCGTCGTGCTGGGTGCGGGTGTCGAGCCCGTGGGCCGGCGGTGGATTCGGAGGCGTGCAGATTCCGCGTGTGGGCGA
CGAGGTCGTGGTCGATTTTCTGAATGGCGATCCGGACGAGCCGATCGTGACCGGGCGGGTTTACAACGGCGAGAAGATGC
CGCCGTGGGGGCTGCCGGAGAGTGCGACGCAGAGCGGGCTGTTGTCGCGGTCGTCGCCGGGCGGGACGACCGAGCACGCG
AACGCGTTCCGGTTCGAGGACAAGAAGGGCGCGGAGCAGCTGTGGATGCATGCGGAACGGAATTTCGACGCGGAGACGGA
GGCCGATCATTCGCTTTCCATCGAGCACGACCACACGCATACGGTCGGCAACGACGAAACGATGCAGGTGAGGAACAACC
GGCAACGCAGCGTCGGGCAGGGCGAGACGGTGAACATCGGGCGGCATCGGGTCGCGCAGATCAAGGGGAATGAGACGCAG
GGGGTGGTGGGGGATCGCACGCGCACGGTCGGGAAGAAGGAGACCGTGACGATCGTGTCGGATCGCGAGGCGACGATCGG
CGGCAATCACATGGAGACGGTCGTGAAAGACAAGACCGAATCGATCGGCGAGGGCAAGACGCTGAATGTCGTCAAGCACT
ATCAGACGAATTCGAAAAGCATGAAGACGACGGTCGCTGAACATCATGTGGAGGAGATCGGTGAGCGGACGTCGACGATT
GCACACGCGCATAAGCTCACGGTCCGCGGCGAACACGCCGTCAGCGTCGGCGCAAACCACACGACGAACGTGCAGCATCA
GGTGCTCGTCAATGCCGGCGACCAGCGTGCGCTCGTGTGCGGGAAGTCGAGCGTCCTGATGAAGAGCGACGGCACGATCC
TGATCCAGGGTGTCAACGTCGAATCAAGCGGCTCCGACAGCCACAGCGTGCGCGGCAAGAAGGTCACGACATCGGCGTCG
GTCGAGCATACGGTCGAAGGGACCGTGTTGAAGCTGAATCCGTAA

Upstream 100 bases:

>100_bases
CGACGATCGAAGGCCGCACAATGTTTGCTGTCAAGGTGGGCGCAGCCGACCGGTGGTTCGTGTACTGGTTTGTTGACCAG
TCCGACGAGGAGGCAACGAC

Downstream 100 bases:

>100_bases
CGGGGGCTTGAGCGTATGCAGAACTGGCAGCCGACGAATCCGGTGGAGCGCAGGTTCATGGACGCACACGCGGACTGGAT
GCGTTTCGCGAAAGATCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Rhs Element Vgr Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; VgrG-Like Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; RHS Accessory Genetic Element; Vgr Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 734; Mature: 733

Protein sequence:

>734_residues
MSRVFTLDSPHGDGLKFHTLDGSDELGRLFEFRIEALADSHSLSLKDLLGKPVTVRIEQQGQSTRYLNGIVARASLAGRR
AERYYGYELLVRPWLWLATRRSDCRIFQNKTVPEIVQEVLSTYGFPIENHLAESYVPREYCVQYNGTDAAFVSRLMEFEG
IYYWFRHAEDTHTLMLSDAMSSHTALPGYETIPYIARDRTVIADVEHIDGWLPARQVSVGKHQTTDYDYTKPRADLSSQK
VDPRGHDHDSFASFEWQGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGAAPGYLFTLAHCPRADRNREYLIVRCQY
RFQENAYASDQGTEAVVHQTMMLVRPSSLPYRPPRETPRPRTNEPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQ
DSSCWVRVSSPWAGGGFGGVQIPRVGDEVVVDFLNGDPDEPIVTGRVYNGEKMPPWGLPESATQSGLLSRSSPGGTTEHA
NAFRFEDKKGAEQLWMHAERNFDAETEADHSLSIEHDHTHTVGNDETMQVRNNRQRSVGQGETVNIGRHRVAQIKGNETQ
GVVGDRTRTVGKKETVTIVSDREATIGGNHMETVVKDKTESIGEGKTLNVVKHYQTNSKSMKTTVAEHHVEEIGERTSTI
AHAHKLTVRGEHAVSVGANHTTNVQHQVLVNAGDQRALVCGKSSVLMKSDGTILIQGVNVESSGSDSHSVRGKKVTTSAS
VEHTVEGTVLKLNP

Sequences:

>Translated_734_residues
MSRVFTLDSPHGDGLKFHTLDGSDELGRLFEFRIEALADSHSLSLKDLLGKPVTVRIEQQGQSTRYLNGIVARASLAGRR
AERYYGYELLVRPWLWLATRRSDCRIFQNKTVPEIVQEVLSTYGFPIENHLAESYVPREYCVQYNGTDAAFVSRLMEFEG
IYYWFRHAEDTHTLMLSDAMSSHTALPGYETIPYIARDRTVIADVEHIDGWLPARQVSVGKHQTTDYDYTKPRADLSSQK
VDPRGHDHDSFASFEWQGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGAAPGYLFTLAHCPRADRNREYLIVRCQY
RFQENAYASDQGTEAVVHQTMMLVRPSSLPYRPPRETPRPRTNEPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQ
DSSCWVRVSSPWAGGGFGGVQIPRVGDEVVVDFLNGDPDEPIVTGRVYNGEKMPPWGLPESATQSGLLSRSSPGGTTEHA
NAFRFEDKKGAEQLWMHAERNFDAETEADHSLSIEHDHTHTVGNDETMQVRNNRQRSVGQGETVNIGRHRVAQIKGNETQ
GVVGDRTRTVGKKETVTIVSDREATIGGNHMETVVKDKTESIGEGKTLNVVKHYQTNSKSMKTTVAEHHVEEIGERTSTI
AHAHKLTVRGEHAVSVGANHTTNVQHQVLVNAGDQRALVCGKSSVLMKSDGTILIQGVNVESSGSDSHSVRGKKVTTSAS
VEHTVEGTVLKLNP
>Mature_733_residues
SRVFTLDSPHGDGLKFHTLDGSDELGRLFEFRIEALADSHSLSLKDLLGKPVTVRIEQQGQSTRYLNGIVARASLAGRRA
ERYYGYELLVRPWLWLATRRSDCRIFQNKTVPEIVQEVLSTYGFPIENHLAESYVPREYCVQYNGTDAAFVSRLMEFEGI
YYWFRHAEDTHTLMLSDAMSSHTALPGYETIPYIARDRTVIADVEHIDGWLPARQVSVGKHQTTDYDYTKPRADLSSQKV
DPRGHDHDSFASFEWQGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGAAPGYLFTLAHCPRADRNREYLIVRCQYR
FQENAYASDQGTEAVVHQTMMLVRPSSLPYRPPRETPRPRTNEPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQD
SSCWVRVSSPWAGGGFGGVQIPRVGDEVVVDFLNGDPDEPIVTGRVYNGEKMPPWGLPESATQSGLLSRSSPGGTTEHAN
AFRFEDKKGAEQLWMHAERNFDAETEADHSLSIEHDHTHTVGNDETMQVRNNRQRSVGQGETVNIGRHRVAQIKGNETQG
VVGDRTRTVGKKETVTIVSDREATIGGNHMETVVKDKTESIGEGKTLNVVKHYQTNSKSMKTTVAEHHVEEIGERTSTIA
HAHKLTVRGEHAVSVGANHTTNVQHQVLVNAGDQRALVCGKSSVLMKSDGTILIQGVNVESSGSDSHSVRGKKVTTSASV
EHTVEGTVLKLNP

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82013; Mature: 81882

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVFTLDSPHGDGLKFHTLDGSDELGRLFEFRIEALADSHSLSLKDLLGKPVTVRIEQQ
CCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEECCC
GQSTRYLNGIVARASLAGRRAERYYGYELLVRPWLWLATRRSDCRIFQNKTVPEIVQEVL
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHEECCCCCCEEECCCCHHHHHHHHH
STYGFPIENHLAESYVPREYCVQYNGTDAAFVSRLMEFEGIYYWFRHAEDTHTLMLSDAM
HHHCCCHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHCCEEEEEECCCCCEEEEEEHHH
SSHTALPGYETIPYIARDRTVIADVEHIDGWLPARQVSVGKHQTTDYDYTKPRADLSSQK
HCCCCCCCCCCCCEEECCCEEEEEHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
VDPRGHDHDSFASFEWQGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGAAPGYLFT
CCCCCCCCCCCCEEEECCCCCCCCCCCCHHHEEEHHHHHHHHHHCCCCCCCCCCCCEEEE
LAHCPRADRNREYLIVRCQYRFQENAYASDQGTEAVVHQTMMLVRPSSLPYRPPRETPRP
EECCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCC
RTNEPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQDSSCWVRVSSPWAGGGFGGV
CCCCCCEEEEECCCCCHHCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCE
QIPRVGDEVVVDFLNGDPDEPIVTGRVYNGEKMPPWGLPESATQSGLLSRSSPGGTTEHA
ECCCCCHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
NAFRFEDKKGAEQLWMHAERNFDAETEADHSLSIEHDHTHTVGNDETMQVRNNRQRSVGQ
CCEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCC
GETVNIGRHRVAQIKGNETQGVVGDRTRTVGKKETVTIVSDREATIGGNHMETVVKDKTE
CCEEECCCEEEEEECCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH
SIGEGKTLNVVKHYQTNSKSMKTTVAEHHVEEIGERTSTIAHAHKLTVRGEHAVSVGANH
HCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCC
TTNVQHQVLVNAGDQRALVCGKSSVLMKSDGTILIQGVNVESSGSDSHSVRGKKVTTSAS
CCCCEEEEEEECCCCEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEECCC
VEHTVEGTVLKLNP
CEEEECCEEEEECC
>Mature Secondary Structure 
SRVFTLDSPHGDGLKFHTLDGSDELGRLFEFRIEALADSHSLSLKDLLGKPVTVRIEQQ
CEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEECCC
GQSTRYLNGIVARASLAGRRAERYYGYELLVRPWLWLATRRSDCRIFQNKTVPEIVQEVL
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHEECCCCCCEEECCCCHHHHHHHHH
STYGFPIENHLAESYVPREYCVQYNGTDAAFVSRLMEFEGIYYWFRHAEDTHTLMLSDAM
HHHCCCHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHCCEEEEEECCCCCEEEEEEHHH
SSHTALPGYETIPYIARDRTVIADVEHIDGWLPARQVSVGKHQTTDYDYTKPRADLSSQK
HCCCCCCCCCCCCEEECCCEEEEEHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
VDPRGHDHDSFASFEWQGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGAAPGYLFT
CCCCCCCCCCCCEEEECCCCCCCCCCCCHHHEEEHHHHHHHHHHCCCCCCCCCCCCEEEE
LAHCPRADRNREYLIVRCQYRFQENAYASDQGTEAVVHQTMMLVRPSSLPYRPPRETPRP
EECCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCC
RTNEPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQDSSCWVRVSSPWAGGGFGGV
CCCCCCEEEEECCCCCHHCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCE
QIPRVGDEVVVDFLNGDPDEPIVTGRVYNGEKMPPWGLPESATQSGLLSRSSPGGTTEHA
ECCCCCHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
NAFRFEDKKGAEQLWMHAERNFDAETEADHSLSIEHDHTHTVGNDETMQVRNNRQRSVGQ
CCEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCC
GETVNIGRHRVAQIKGNETQGVVGDRTRTVGKKETVTIVSDREATIGGNHMETVVKDKTE
CCEEECCCEEEEEECCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH
SIGEGKTLNVVKHYQTNSKSMKTTVAEHHVEEIGERTSTIAHAHKLTVRGEHAVSVGANH
HCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCC
TTNVQHQVLVNAGDQRALVCGKSSVLMKSDGTILIQGVNVESSGSDSHSVRGKKVTTSAS
CCCCEEEEEEECCCCEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEECCC
VEHTVEGTVLKLNP
CEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA