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The map label for this gene is mmgC [H]

Identifier: 53723047

GI number: 53723047

Start: 2741521

End: 2742693

Strand: Reverse

Name: mmgC [H]

Synonym: BPSS2029

Alternate gene names: 53723047

Gene position: 2742693-2741521 (Counterclockwise)

Preceding gene: 53723067

Following gene: 53723046

Centisome position: 86.44

GC content: 67.86

Gene sequence:

>1173_bases
ATGCATCGCACGACCCCGAACCCGGCGTATTACCGCCCCGAACACATCGAATTGCAGGACACGCTGCGCCGGTTCGTCGC
GAAGGAGATCTCGCCCTACGTGAACGACTGGGACGAGGCGGGCGAGTTTCCGCGCGAGCTGTATGAGAAGGCGGCGCGAA
TCGGGCTGCTCGGCATCGGCTTTCCGGACGCATACGGCGGCGTCGAGGACGTCGACATGTTCCATCGGCTGATCTGCTCG
CTCGAGCTCGCGCGCTGCGGCGCGGGCGGCGTCGTCAGCTCGCTGATGTCGCACACGATCGGCGCGCCGCCGATCGCGCA
TGCGGGCAGCGACGCGCTGAAGGCGCGCGTGCTGCCCGGCATTCTCGCGGGCCGCAGGATCTCGGCGCTCGCGATCACGG
AGCCGGGCGGCGGCTCGGACGTCGCCGCGCTGCGCACGAGCGCGATGCGCGACGGCGATCATTACGTCGTGAACGGCGAG
AAAGTGTTCATCACGTCGGGCATGCGCGCCGATCACTACACGGTCGCCGTGCGCACCGACGCGCACGCGCAGGGCGCGAA
GGGGCTGTCGCTGCTGCTCGTCGACGGCGATACGCCGGGTCTGTCGAAGACGCCGTTGAAGAAAATGGGCTGGTGGGCGT
CCGACACCGCGCATCTGCGCTTCGACGATTGCCGCGTGCCGGCGGCGAACCTGATCGGCCCGGAGGGCGGCGGCTTCGCG
CTTGTCATGCAGAACTTCAATCTCGAGCGTTTCAGCCTCGCGGCGTCGGCGCTCGGCTTCGCGCAGGTCTGCTACGAGGA
TGCGCTCGACTGGGCGCGGCAGCGAAGGACGTTCGGGCAGCGCGTGGCCGATCATCAGGTGATCCGCCACAAGCTCGTCG
ACATGGCGACGCGCATCGGCGCGACGCGCGCCTGGCTCGAGCAGTGCGCGTGGCAGATCGATCACGTCGACAGGCGCGCG
CCGGAACTCGTCGCGACGATCTGCATACTGAAGAATTTCGCGACGCAGACGATGCAGTTCTGCGCGGATGCCGCCGTGCA
GATTCTCGGCGGCATGGGCTACATGCGCGGCACGCGGCCGGAGCGTATCTACCGCGAGGTGAAGGTCAACATGATCGGCG
GCGGCGCGGAAGAAATCATGAAGGACCTCGCCGCGCGGCAGCTCGAGTACTAG

Upstream 100 bases:

>100_bases
GATTTATTTTTAGAGGGTTCCTAGAATCGCTACGATCGACGCCGCGCCGGGGAATGCGTACCGGAGGGCCGTCACCGGCA
AAAGCGAACAGGAGACAGCG

Downstream 100 bases:

>100_bases
GGGCTGTTTGCATACGGAACGCACATGCGTTGCCACGAGAGCGGCCGCTCGTCGCTTGTTTGACTCGGTCAAACGGCGCG
CGCGGGCGGATCGGCTATGC

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MHRTTPNPAYYRPEHIELQDTLRRFVAKEISPYVNDWDEAGEFPRELYEKAARIGLLGIGFPDAYGGVEDVDMFHRLICS
LELARCGAGGVVSSLMSHTIGAPPIAHAGSDALKARVLPGILAGRRISALAITEPGGGSDVAALRTSAMRDGDHYVVNGE
KVFITSGMRADHYTVAVRTDAHAQGAKGLSLLLVDGDTPGLSKTPLKKMGWWASDTAHLRFDDCRVPAANLIGPEGGGFA
LVMQNFNLERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLEQCAWQIDHVDRRA
PELVATICILKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREVKVNMIGGGAEEIMKDLAARQLEY

Sequences:

>Translated_390_residues
MHRTTPNPAYYRPEHIELQDTLRRFVAKEISPYVNDWDEAGEFPRELYEKAARIGLLGIGFPDAYGGVEDVDMFHRLICS
LELARCGAGGVVSSLMSHTIGAPPIAHAGSDALKARVLPGILAGRRISALAITEPGGGSDVAALRTSAMRDGDHYVVNGE
KVFITSGMRADHYTVAVRTDAHAQGAKGLSLLLVDGDTPGLSKTPLKKMGWWASDTAHLRFDDCRVPAANLIGPEGGGFA
LVMQNFNLERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLEQCAWQIDHVDRRA
PELVATICILKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREVKVNMIGGGAEEIMKDLAARQLEY
>Mature_390_residues
MHRTTPNPAYYRPEHIELQDTLRRFVAKEISPYVNDWDEAGEFPRELYEKAARIGLLGIGFPDAYGGVEDVDMFHRLICS
LELARCGAGGVVSSLMSHTIGAPPIAHAGSDALKARVLPGILAGRRISALAITEPGGGSDVAALRTSAMRDGDHYVVNGE
KVFITSGMRADHYTVAVRTDAHAQGAKGLSLLLVDGDTPGLSKTPLKKMGWWASDTAHLRFDDCRVPAANLIGPEGGGFA
LVMQNFNLERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIGATRAWLEQCAWQIDHVDRRA
PELVATICILKNFATQTMQFCADAAVQILGGMGYMRGTRPERIYREVKVNMIGGGAEEIMKDLAARQLEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=382, Percent_Identity=35.3403141361257, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI187960098, Length=381, Percent_Identity=33.5958005249344, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI4557231, Length=381, Percent_Identity=33.5958005249344, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI226958412, Length=378, Percent_Identity=32.010582010582, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI7656849, Length=376, Percent_Identity=32.7127659574468, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI4557233, Length=379, Percent_Identity=33.509234828496, Blast_Score=188, Evalue=7e-48,
Organism=Homo sapiens, GI226958414, Length=345, Percent_Identity=32.463768115942, Blast_Score=182, Evalue=3e-46,
Organism=Homo sapiens, GI4501859, Length=380, Percent_Identity=28.6842105263158, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI21361497, Length=389, Percent_Identity=30.0771208226221, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI76496475, Length=395, Percent_Identity=30.379746835443, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI4557235, Length=395, Percent_Identity=30.379746835443, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI7669494, Length=352, Percent_Identity=28.125, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI4503943, Length=352, Percent_Identity=28.125, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI38505218, Length=346, Percent_Identity=27.1676300578035, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI211971008, Length=403, Percent_Identity=24.0694789081886, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI48976061, Length=403, Percent_Identity=24.0694789081886, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI87081958, Length=357, Percent_Identity=32.7731092436975, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1786223, Length=359, Percent_Identity=28.9693593314763, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI87082384, Length=296, Percent_Identity=30.0675675675676, Blast_Score=82, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17570075, Length=378, Percent_Identity=34.3915343915344, Blast_Score=218, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17538396, Length=384, Percent_Identity=34.1145833333333, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI17569725, Length=375, Percent_Identity=32.8, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI17533517, Length=378, Percent_Identity=32.8042328042328, Blast_Score=207, Evalue=7e-54,
Organism=Caenorhabditis elegans, GI17534899, Length=375, Percent_Identity=32, Blast_Score=204, Evalue=7e-53,
Organism=Caenorhabditis elegans, GI17505929, Length=388, Percent_Identity=32.7319587628866, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17551932, Length=384, Percent_Identity=30.7291666666667, Blast_Score=193, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17508101, Length=389, Percent_Identity=30.0771208226221, Blast_Score=181, Evalue=9e-46,
Organism=Caenorhabditis elegans, GI71985184, Length=385, Percent_Identity=30.6493506493506, Blast_Score=174, Evalue=9e-44,
Organism=Caenorhabditis elegans, GI17506239, Length=387, Percent_Identity=27.906976744186, Blast_Score=164, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI71985192, Length=318, Percent_Identity=30.5031446540881, Blast_Score=143, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI71990804, Length=262, Percent_Identity=30.5343511450382, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=31.7596566523605, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI71982178, Length=269, Percent_Identity=27.1375464684015, Blast_Score=124, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI17534353, Length=335, Percent_Identity=26.865671641791, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17531909, Length=247, Percent_Identity=22.6720647773279, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI86563383, Length=397, Percent_Identity=27.7078085642317, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI86563381, Length=397, Percent_Identity=27.7078085642317, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562446, Length=299, Percent_Identity=24.7491638795987, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24660351, Length=380, Percent_Identity=34.4736842105263, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI21356377, Length=369, Percent_Identity=31.7073170731707, Blast_Score=191, Evalue=8e-49,
Organism=Drosophila melanogaster, GI21355753, Length=378, Percent_Identity=32.8042328042328, Blast_Score=188, Evalue=5e-48,
Organism=Drosophila melanogaster, GI24646207, Length=373, Percent_Identity=32.7077747989276, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI281363737, Length=391, Percent_Identity=30.1790281329923, Blast_Score=161, Evalue=9e-40,
Organism=Drosophila melanogaster, GI24666513, Length=378, Percent_Identity=28.3068783068783, Blast_Score=154, Evalue=9e-38,
Organism=Drosophila melanogaster, GI19920834, Length=296, Percent_Identity=32.4324324324324, Blast_Score=109, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42754; Mature: 42754

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRTTPNPAYYRPEHIELQDTLRRFVAKEISPYVNDWDEAGEFPRELYEKAARIGLLGIG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHCEEECC
FPDAYGGVEDVDMFHRLICSLELARCGAGGVVSSLMSHTIGAPPIAHAGSDALKARVLPG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ILAGRRISALAITEPGGGSDVAALRTSAMRDGDHYVVNGEKVFITSGMRADHYTVAVRTD
HHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCEEEEEEEC
AHAQGAKGLSLLLVDGDTPGLSKTPLKKMGWWASDTAHLRFDDCRVPAANLIGPEGGGFA
CCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCHHHCCCCCCCCEE
LVMQNFNLERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIG
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRAWLEQCAWQIDHVDRRAPELVATICILKNFATQTMQFCADAAVQILGGMGYMRGTRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCH
ERIYREVKVNMIGGGAEEIMKDLAARQLEY
HHHHHHHHHEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHRTTPNPAYYRPEHIELQDTLRRFVAKEISPYVNDWDEAGEFPRELYEKAARIGLLGIG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHCEEECC
FPDAYGGVEDVDMFHRLICSLELARCGAGGVVSSLMSHTIGAPPIAHAGSDALKARVLPG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ILAGRRISALAITEPGGGSDVAALRTSAMRDGDHYVVNGEKVFITSGMRADHYTVAVRTD
HHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCEEEEEEEC
AHAQGAKGLSLLLVDGDTPGLSKTPLKKMGWWASDTAHLRFDDCRVPAANLIGPEGGGFA
CCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCHHHCCCCCCCCEE
LVMQNFNLERFSLAASALGFAQVCYEDALDWARQRRTFGQRVADHQVIRHKLVDMATRIG
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRAWLEQCAWQIDHVDRRAPELVATICILKNFATQTMQFCADAAVQILGGMGYMRGTRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCH
ERIYREVKVNMIGGGAEEIMKDLAARQLEY
HHHHHHHHHEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]