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The map label for this gene is kstR2 [H]

Identifier: 53723046

GI number: 53723046

Start: 2740651

End: 2741325

Strand: Reverse

Name: kstR2 [H]

Synonym: BPSS2028

Alternate gene names: 53723046

Gene position: 2741325-2740651 (Counterclockwise)

Preceding gene: 53723047

Following gene: 53723045

Centisome position: 86.4

GC content: 67.11

Gene sequence:

>675_bases
ATGAGCGCCATACCTCAGGCCGCGCGCAAGCGCGGGCGTCCCGTGAAGGGCGAGAGCGCGACGCTGCGCGACGAGCTGAT
CCTCAAGTCCGCGAAGCTGTTCCGCACGCAGGGATACGAACGAACGACGGTCCGCGACATCGCCGCGGCAGCAGGCGTGC
AGGCGGGAAGCTGGTTCTATTACTTCAAGACGAAGCAGGACATTCTCGTTGCCGTGATGGAGCAGGGGATGTCGAACGCG
CTCGCGCGGATCGAGGCGCTCGACGTCGAGCACCTGCCCGCGCGCGACGCGTTTCGCGCGCTCGTGCACACGCACTTGCA
CACGCTCGTGTCGCCCGATCACGATTTCATTCCGGTGCTGCTTTACGAATGGAAGTCGCTCGACGAAGCGATGCAGGCGA
AGGTGCTCAAGCTGAAGGACCGCTACGAGGCGGTGTGGGACGGCGTGATCGAACGGCTGCAGGCGGCGGGCGAGTGGCCC
GCGCCGACGCCGATCGACCGCTTGCTGATGTTCGGCGCGCTGAACTGGGTCGCGCAGTGGTACAAACCGGATGGCGCGTT
GGGGCTCGACGCGCTTGCCGAGCATGCGGTGCGGTTTCTGTTGCGCACGGCCGAGACGCCGGCGCCTGCGCCCGCGGGCA
CGGCGAAGAGACGGCGCGGGGTGAAAGCGAGCTGA

Upstream 100 bases:

>100_bases
TATGCAAGCGTTTGAAACTCGCCGATAATCGCTCGAATGACGGGCGTCGCCGCGGCTTCGCGGCGGCGAGCGCCGGTTCG
AAACATCGCATTGTGATTCC

Downstream 100 bases:

>100_bases
CGCGGCGGGCGGATGCGGGCGAACCGGTTCGCGGTTTTCGTTCGATGTCCGGATCAGCGCGGCGTTTGCCGTGCGCGCGT
TCGGCACGCCGCCGGCTGTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSAIPQAARKRGRPVKGESATLRDELILKSAKLFRTQGYERTTVRDIAAAAGVQAGSWFYYFKTKQDILVAVMEQGMSNA
LARIEALDVEHLPARDAFRALVHTHLHTLVSPDHDFIPVLLYEWKSLDEAMQAKVLKLKDRYEAVWDGVIERLQAAGEWP
APTPIDRLLMFGALNWVAQWYKPDGALGLDALAEHAVRFLLRTAETPAPAPAGTAKRRRGVKAS

Sequences:

>Translated_224_residues
MSAIPQAARKRGRPVKGESATLRDELILKSAKLFRTQGYERTTVRDIAAAAGVQAGSWFYYFKTKQDILVAVMEQGMSNA
LARIEALDVEHLPARDAFRALVHTHLHTLVSPDHDFIPVLLYEWKSLDEAMQAKVLKLKDRYEAVWDGVIERLQAAGEWP
APTPIDRLLMFGALNWVAQWYKPDGALGLDALAEHAVRFLLRTAETPAPAPAGTAKRRRGVKAS
>Mature_223_residues
SAIPQAARKRGRPVKGESATLRDELILKSAKLFRTQGYERTTVRDIAAAAGVQAGSWFYYFKTKQDILVAVMEQGMSNAL
ARIEALDVEHLPARDAFRALVHTHLHTLVSPDHDFIPVLLYEWKSLDEAMQAKVLKLKDRYEAVWDGVIERLQAAGEWPA
PTPIDRLLMFGALNWVAQWYKPDGALGLDALAEHAVRFLLRTAETPAPAPAGTAKRRRGVKAS

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24954; Mature: 24823

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIPQAARKRGRPVKGESATLRDELILKSAKLFRTQGYERTTVRDIAAAAGVQAGSWFY
CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEE
YFKTKQDILVAVMEQGMSNALARIEALDVEHLPARDAFRALVHTHLHTLVSPDHDFIPVL
EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
LYEWKSLDEAMQAKVLKLKDRYEAVWDGVIERLQAAGEWPAPTPIDRLLMFGALNWVAQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YKPDGALGLDALAEHAVRFLLRTAETPAPAPAGTAKRRRGVKAS
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure 
SAIPQAARKRGRPVKGESATLRDELILKSAKLFRTQGYERTTVRDIAAAAGVQAGSWFY
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEE
YFKTKQDILVAVMEQGMSNALARIEALDVEHLPARDAFRALVHTHLHTLVSPDHDFIPVL
EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
LYEWKSLDEAMQAKVLKLKDRYEAVWDGVIERLQAAGEWPAPTPIDRLLMFGALNWVAQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YKPDGALGLDALAEHAVRFLLRTAETPAPAPAGTAKRRRGVKAS
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA