| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723028
Identifier: 53723028
GI number: 53723028
Start: 2715995
End: 2717116
Strand: Reverse
Name: 53723028
Synonym: BPSS2010
Alternate gene names: NA
Gene position: 2717116-2715995 (Counterclockwise)
Preceding gene: 53723029
Following gene: 53723027
Centisome position: 85.63
GC content: 70.5
Gene sequence:
>1122_bases ATGAACCGGCTCGCGCTCGTCGCGGCCGCCCGCGCATGCGCGGCGGCCCGTCTTCTGCGACGCCGCGCGCTGCGCGCGGC GTCGCTCGCGGCGTGCGGACTCGCGCTTTGCGCGAACGCGGCCGAGTTGCAATTGTCCGGCTACTACCAGCGGCCCGACG GCGCGATCACCGTGCGCCTGAACGGGGCCGGCATCGATCCGTATTTCGCCGCGAAGGCGCTGCTCGCCGCATCCGATGCG CAGCTCGACGCGCGGCAGGCCGCGCGCGCGTGGATCGCATGGCTGCTGCCGCGTCAGCGCGCCGACGGCGGCTTCGATCG CTTCTGCCTGAAGGACGGCCAATACGCGGCGTGCGCGGACGCGGACGCGGACGATGCGATGATGGCGACGTGGATGGAGC TGCTCGCGCGCTTCGCGCCGCCGGGCGGGATGCCCGCGAACTGGGCGCGCAGCCTCGCGCGCGCGAGCACGCATCTCGAC GCGCTGCTCGACAAGCGCACGGGCGTCTACCAGATCTCGCCGACGCTGCACGTCGCGCTCCTGATGGACAACGTCGAAGT GCACAGCGCGCTGCAGGCGCTCGCCGCGTATCACATCCGCCATGCCGACTACGCGCATGCGCAGCCGTGGAGCCAGCGCG CGGACCGGCTGTCCGCCGCGATCCTGCAGGTGTTCTGGCGCGGCGCGCAAGCGGGTTTCCGGGCGAGCACGCAGCAGATC GGCGACACGGGCTTCTATCCGGAGAAGGTCGCGCAGATCTTCCCGATCCTGTCGGGCATTCGCGTGCCCGATCAATCGAA CGCGGCGATCTACGCGCAATGGATGCACCGCTACGGCAAGACCTGGCTGCACCTGGCCGGCACCGATTTTCCGTGGGGGC TGATCGCGCTCGTCGCCTACAAGATGAACGACTGGAACACCGTCGCGTGCTGGCACGCGCGCTCCGGCCCATACCGGCAC GGGCCGCACTGGAACGTGCTGGAGGAAGCGCTTTATCTGGCATTCGAAAACAGGATGACTGATCCGGTCGCGCCCGCGCG CTGCGGGCTCGCCACCGCGTCGGCCGATTTCGCGCCGCGCGACGCAAGCGCGCGCGCGGGCATCGCGAGCCTTTGGAGGT AA
Upstream 100 bases:
>100_bases TGCAGTGACGTAGCGGGGAAGTCAGCACGTTGCCGCGCGGCGGTTTCAGCCGCGCGCGGCAACGAACACGGCGCACAACT GCGCGCAAGCGCACGACATC
Downstream 100 bases:
>100_bases CGAGTCATGTGCGGGATCGTCGGCGCGGTAGCGCAACGGAACATCGTTCCGATTCTGATCGAAGGCTTACGCCGCCTCGA ATATCGCGGCTACGATTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MNRLALVAAARACAAARLLRRRALRAASLAACGLALCANAAELQLSGYYQRPDGAITVRLNGAGIDPYFAAKALLAASDA QLDARQAARAWIAWLLPRQRADGGFDRFCLKDGQYAACADADADDAMMATWMELLARFAPPGGMPANWARSLARASTHLD ALLDKRTGVYQISPTLHVALLMDNVEVHSALQALAAYHIRHADYAHAQPWSQRADRLSAAILQVFWRGAQAGFRASTQQI GDTGFYPEKVAQIFPILSGIRVPDQSNAAIYAQWMHRYGKTWLHLAGTDFPWGLIALVAYKMNDWNTVACWHARSGPYRH GPHWNVLEEALYLAFENRMTDPVAPARCGLATASADFAPRDASARAGIASLWR
Sequences:
>Translated_373_residues MNRLALVAAARACAAARLLRRRALRAASLAACGLALCANAAELQLSGYYQRPDGAITVRLNGAGIDPYFAAKALLAASDA QLDARQAARAWIAWLLPRQRADGGFDRFCLKDGQYAACADADADDAMMATWMELLARFAPPGGMPANWARSLARASTHLD ALLDKRTGVYQISPTLHVALLMDNVEVHSALQALAAYHIRHADYAHAQPWSQRADRLSAAILQVFWRGAQAGFRASTQQI GDTGFYPEKVAQIFPILSGIRVPDQSNAAIYAQWMHRYGKTWLHLAGTDFPWGLIALVAYKMNDWNTVACWHARSGPYRH GPHWNVLEEALYLAFENRMTDPVAPARCGLATASADFAPRDASARAGIASLWR >Mature_373_residues MNRLALVAAARACAAARLLRRRALRAASLAACGLALCANAAELQLSGYYQRPDGAITVRLNGAGIDPYFAAKALLAASDA QLDARQAARAWIAWLLPRQRADGGFDRFCLKDGQYAACADADADDAMMATWMELLARFAPPGGMPANWARSLARASTHLD ALLDKRTGVYQISPTLHVALLMDNVEVHSALQALAAYHIRHADYAHAQPWSQRADRLSAAILQVFWRGAQAGFRASTQQI GDTGFYPEKVAQIFPILSGIRVPDQSNAAIYAQWMHRYGKTWLHLAGTDFPWGLIALVAYKMNDWNTVACWHARSGPYRH GPHWNVLEEALYLAFENRMTDPVAPARCGLATASADFAPRDASARAGIASLWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40770; Mature: 40770
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLALVAAARACAAARLLRRRALRAASLAACGLALCANAAELQLSGYYQRPDGAITVRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECEEECCCCEEEEEE NGAGIDPYFAAKALLAASDAQLDARQAARAWIAWLLPRQRADGGFDRFCLKDGQYAACAD ECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECC ADADDAMMATWMELLARFAPPGGMPANWARSLARASTHLDALLDKRTGVYQISPTLHVAL CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEE LMDNVEVHSALQALAAYHIRHADYAHAQPWSQRADRLSAAILQVFWRGAQAGFRASTQQI EECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC GDTGFYPEKVAQIFPILSGIRVPDQSNAAIYAQWMHRYGKTWLHLAGTDFPWGLIALVAY CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH KMNDWNTVACWHARSGPYRHGPHWNVLEEALYLAFENRMTDPVAPARCGLATASADFAPR HCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCEECCCCCCCC DASARAGIASLWR CCCHHCCHHHHCC >Mature Secondary Structure MNRLALVAAARACAAARLLRRRALRAASLAACGLALCANAAELQLSGYYQRPDGAITVRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECEEECCCCEEEEEE NGAGIDPYFAAKALLAASDAQLDARQAARAWIAWLLPRQRADGGFDRFCLKDGQYAACAD ECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECC ADADDAMMATWMELLARFAPPGGMPANWARSLARASTHLDALLDKRTGVYQISPTLHVAL CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEE LMDNVEVHSALQALAAYHIRHADYAHAQPWSQRADRLSAAILQVFWRGAQAGFRASTQQI EECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC GDTGFYPEKVAQIFPILSGIRVPDQSNAAIYAQWMHRYGKTWLHLAGTDFPWGLIALVAY CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH KMNDWNTVACWHARSGPYRHGPHWNVLEEALYLAFENRMTDPVAPARCGLATASADFAPR HCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCEECCCCCCCC DASARAGIASLWR CCCHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA