| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723013
Identifier: 53723013
GI number: 53723013
Start: 2693248
End: 2695182
Strand: Reverse
Name: 53723013
Synonym: BPSS1992
Alternate gene names: NA
Gene position: 2695182-2693248 (Counterclockwise)
Preceding gene: 53723014
Following gene: 53723011
Centisome position: 84.94
GC content: 71.06
Gene sequence:
>1935_bases ATGAGATTTCATCGAACCGAACCGCGTCGCGCCTGGATTGCCGTGCTCGCCGCCGCCGCGATGCTTGCCGCTTGCGGCGG CGATGACGGCGCGGGCGTCCCGGGTGCATCCGCGCTCGCTCAGGTCCAGCAGGAGGGAGCCGCGCCGTCCGCGGCCGGCG CACCGCAGCTCGCCGCACGCTTCTCGCCGTCCGGCGTGCCGTATGCCAGCCTGTCGAGCGGCGGCCGCTATCGGCCCGTG ATTCAGAACGGGCAGGTGCAGCCGTCGCTGTCGGGCGGCACGATTGCCGAGGAAGCGTGGGTCGAGACGCCCGTCGATTC CGACGGGGACGGCGCGAAGGATCGGATTCACGTGCGCATCGTGCGTCCGTCCGAAACCGCGTCGGGCGCGCGCACGCCTG TCATCGTGCTCGCGAGCCCTTACTACAACGGGCTGGCCGATAGCCCGAACCACAACGTCGACGTCGAGCTCGACGGCACG CCGCATCCCGCCGCTTCGGCGTCCGCGCGAATCATGGCCGCCGCGCCGCAGACGCGGATCTGGCAGCAGCTCGACGCGGC CGCCGCCGGGCGTTCGTGGATCGAAGGCTATTTCGTGCCGCGCGGCTTCACGGTCGTGTACGCGGATTCGCTCGGCACGG CCGGCTCGGACGGCTGCCCGACGATCCTCACGCGCGACGAATCGATCGCGATGGCGTCGGTGATCCGCTGGCTCGGGCGC GGCGCGGCCGCGAAGGACGCGAACGGCAAGCCGCTCGTCGCGACCTGGTCGACGGGGCACGTCGGCATGTACGGCGTATC GTACGACGGCACGCTGCCGAAGATGGTCGCAAGCCTGCGCACGCGCGGGCTCGATGCGATCGTGCCGGTTGCCGGGCTCA CCGACATGTACGGCTACTACCGCTCGGGCGGGCTCGTGCGCGCACCCGACGGCTATCAGGGCGAGGACGTCGACGTCTAC ATCAAGGCGCTGCTGACGAACCCGCATCCGGAGCGCTGCACGCATCTGATCGACGAGGCGTTGCAGAAGGAGGATCGCAA GACGGGCGATTATTCGGCGTTCTGGGCGGCGCGCGAGATTCCGAGCGCGCTCGCGGTCGCGCCCGCGCTCGTCGCGCAAG GGCTCGCCGACGACAACGTGAGGACCGACCAGTCGACGTCGTGGTATCTCGCGATGCGGCGTCAGGGCGTGCCCACGCAG TTGTGGCTGCACCGCGCGCACCATACCGATCCGACCCGCGTGCCCGCGATGGCCGACGCGTGGACCGGGCAGGTGAACCG CTGGTTCACGCGTTATCTGCTCGGCTACGACAACGGCGTCGAGCGCAGCCCGGGCTCGGTGATCGAGCAGGCGGACGGCA CGCTGCTGAAGGAGGCGAGCTGGCCCGCGCGCGGCGCATCGTCCGTCACGTATTTCGCGGGCGGCGACGGCGCGGGCACC GGCACGCTGCTGACGCAGCCGACGGGCGGCCCGCTCGCGAAGTTCACCGACGACGCGCGCATCATGGCGCTCGCGCTGGC GAACGCGAACACGGGCGAGCATCGCAGCCGCTTCGAGACGGCGCCCGTCGCGAGCGCGACGCGGCTCTCGGGCACCGCGA CCGCGCGCGTGCGCCTGACGTTCTCGGCAACCGCGAACGTGACCGCGCTGCTGATCGATCGCGCACCGGACGGCAGCGCG ACGATCATCACCCGCGCGTGGACGGATCCGCGCAACCGTCTGTCGAGCTGGTTCTCGGAGCCGGTGTTGCCCGGCATGCC GTACGATCTGCGCCTCGCGTTCATGCCGCGCGACTACCGGCTCGAAGCGGGACATCGGCTCGGGCTCGTCGTGCTGTCGA GCGACAACGAGGCGACGCTGCGGCCGACGCCGGGCACCGAGCTGACGCTCGATCCAGCCGGCACGAGCGTGACGGTGCCG CTGCTTCCGGCTTGA
Upstream 100 bases:
>100_bases ACGTGCGCGATGCGGCCGGCAGCGTCCGCCGGCATGTTCAACACGACGCCATCCCGCACGGGATGACCGTTTTCAGACGA TCATCGAAACAAGGACAACA
Downstream 100 bases:
>100_bases CGGGAAGCGCTCGGGCGCAGGCGGCGCGCGATGCGTGCGCCGCCTGCGCCGCCTGAAAGAGACTTCGCCGCGGGCGGTTT GCCCGCGGCGATGCCGTTTT
Product: x-prolyl-dipeptidyl aminopeptidase
Products: NA
Alternate protein names: X-Pro dipeptidyl-peptidase; X-prolyl-dipeptidyl aminopeptidase; X-PDAP [H]
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MRFHRTEPRRAWIAVLAAAAMLAACGGDDGAGVPGASALAQVQQEGAAPSAAGAPQLAARFSPSGVPYASLSSGGRYRPV IQNGQVQPSLSGGTIAEEAWVETPVDSDGDGAKDRIHVRIVRPSETASGARTPVIVLASPYYNGLADSPNHNVDVELDGT PHPAASASARIMAAAPQTRIWQQLDAAAAGRSWIEGYFVPRGFTVVYADSLGTAGSDGCPTILTRDESIAMASVIRWLGR GAAAKDANGKPLVATWSTGHVGMYGVSYDGTLPKMVASLRTRGLDAIVPVAGLTDMYGYYRSGGLVRAPDGYQGEDVDVY IKALLTNPHPERCTHLIDEALQKEDRKTGDYSAFWAAREIPSALAVAPALVAQGLADDNVRTDQSTSWYLAMRRQGVPTQ LWLHRAHHTDPTRVPAMADAWTGQVNRWFTRYLLGYDNGVERSPGSVIEQADGTLLKEASWPARGASSVTYFAGGDGAGT GTLLTQPTGGPLAKFTDDARIMALALANANTGEHRSRFETAPVASATRLSGTATARVRLTFSATANVTALLIDRAPDGSA TIITRAWTDPRNRLSSWFSEPVLPGMPYDLRLAFMPRDYRLEAGHRLGLVVLSSDNEATLRPTPGTELTLDPAGTSVTVP LLPA
Sequences:
>Translated_644_residues MRFHRTEPRRAWIAVLAAAAMLAACGGDDGAGVPGASALAQVQQEGAAPSAAGAPQLAARFSPSGVPYASLSSGGRYRPV IQNGQVQPSLSGGTIAEEAWVETPVDSDGDGAKDRIHVRIVRPSETASGARTPVIVLASPYYNGLADSPNHNVDVELDGT PHPAASASARIMAAAPQTRIWQQLDAAAAGRSWIEGYFVPRGFTVVYADSLGTAGSDGCPTILTRDESIAMASVIRWLGR GAAAKDANGKPLVATWSTGHVGMYGVSYDGTLPKMVASLRTRGLDAIVPVAGLTDMYGYYRSGGLVRAPDGYQGEDVDVY IKALLTNPHPERCTHLIDEALQKEDRKTGDYSAFWAAREIPSALAVAPALVAQGLADDNVRTDQSTSWYLAMRRQGVPTQ LWLHRAHHTDPTRVPAMADAWTGQVNRWFTRYLLGYDNGVERSPGSVIEQADGTLLKEASWPARGASSVTYFAGGDGAGT GTLLTQPTGGPLAKFTDDARIMALALANANTGEHRSRFETAPVASATRLSGTATARVRLTFSATANVTALLIDRAPDGSA TIITRAWTDPRNRLSSWFSEPVLPGMPYDLRLAFMPRDYRLEAGHRLGLVVLSSDNEATLRPTPGTELTLDPAGTSVTVP LLPA >Mature_644_residues MRFHRTEPRRAWIAVLAAAAMLAACGGDDGAGVPGASALAQVQQEGAAPSAAGAPQLAARFSPSGVPYASLSSGGRYRPV IQNGQVQPSLSGGTIAEEAWVETPVDSDGDGAKDRIHVRIVRPSETASGARTPVIVLASPYYNGLADSPNHNVDVELDGT PHPAASASARIMAAAPQTRIWQQLDAAAAGRSWIEGYFVPRGFTVVYADSLGTAGSDGCPTILTRDESIAMASVIRWLGR GAAAKDANGKPLVATWSTGHVGMYGVSYDGTLPKMVASLRTRGLDAIVPVAGLTDMYGYYRSGGLVRAPDGYQGEDVDVY IKALLTNPHPERCTHLIDEALQKEDRKTGDYSAFWAAREIPSALAVAPALVAQGLADDNVRTDQSTSWYLAMRRQGVPTQ LWLHRAHHTDPTRVPAMADAWTGQVNRWFTRYLLGYDNGVERSPGSVIEQADGTLLKEASWPARGASSVTYFAGGDGAGT GTLLTQPTGGPLAKFTDDARIMALALANANTGEHRSRFETAPVASATRLSGTATARVRLTFSATANVTALLIDRAPDGSA TIITRAWTDPRNRLSSWFSEPVLPGMPYDLRLAFMPRDYRLEAGHRLGLVVLSSDNEATLRPTPGTELTLDPAGTSVTVP LLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S15 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR008252 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: =3.4.14.11 [H]
Molecular weight: Translated: 68192; Mature: 68192
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFHRTEPRRAWIAVLAAAAMLAACGGDDGAGVPGASALAQVQQEGAAPSAAGAPQLAAR CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH FSPSGVPYASLSSGGRYRPVIQNGQVQPSLSGGTIAEEAWVETPVDSDGDGAKDRIHVRI CCCCCCCCCCCCCCCCCCCEECCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEE VRPSETASGARTPVIVLASPYYNGLADSPNHNVDVELDGTPHPAASASARIMAAAPQTRI ECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCHHHH WQQLDAAAAGRSWIEGYFVPRGFTVVYADSLGTAGSDGCPTILTRDESIAMASVIRWLGR HHHHHHHHCCCHHHCEEECCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHCC GAAAKDANGKPLVATWSTGHVGMYGVSYDGTLPKMVASLRTRGLDAIVPVAGLTDMYGYY CCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHH RSGGLVRAPDGYQGEDVDVYIKALLTNPHPERCTHLIDEALQKEDRKTGDYSAFWAAREI HCCCEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC PSALAVAPALVAQGLADDNVRTDQSTSWYLAMRRQGVPTQLWLHRAHHTDPTRVPAMADA CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHH WTGQVNRWFTRYLLGYDNGVERSPGSVIEQADGTLLKEASWPARGASSVTYFAGGDGAGT HCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCEEEEECCCCCCC GTLLTQPTGGPLAKFTDDARIMALALANANTGEHRSRFETAPVASATRLSGTATARVRLT CCEEECCCCCCCHHCCCCCEEEEEEEECCCCCCHHHHHCCCCCCCHHCCCCCEEEEEEEE FSATANVTALLIDRAPDGSATIITRAWTDPRNRLSSWFSEPVLPGMPYDLRLAFMPRDYR EECCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEE LEAGHRLGLVVLSSDNEATLRPTPGTELTLDPAGTSVTVPLLPA ECCCCEEEEEEECCCCCEEECCCCCCEEEECCCCCEEEEEECCC >Mature Secondary Structure MRFHRTEPRRAWIAVLAAAAMLAACGGDDGAGVPGASALAQVQQEGAAPSAAGAPQLAAR CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH FSPSGVPYASLSSGGRYRPVIQNGQVQPSLSGGTIAEEAWVETPVDSDGDGAKDRIHVRI CCCCCCCCCCCCCCCCCCCEECCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEE VRPSETASGARTPVIVLASPYYNGLADSPNHNVDVELDGTPHPAASASARIMAAAPQTRI ECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCHHHH WQQLDAAAAGRSWIEGYFVPRGFTVVYADSLGTAGSDGCPTILTRDESIAMASVIRWLGR HHHHHHHHCCCHHHCEEECCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHCC GAAAKDANGKPLVATWSTGHVGMYGVSYDGTLPKMVASLRTRGLDAIVPVAGLTDMYGYY CCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHH RSGGLVRAPDGYQGEDVDVYIKALLTNPHPERCTHLIDEALQKEDRKTGDYSAFWAAREI HCCCEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC PSALAVAPALVAQGLADDNVRTDQSTSWYLAMRRQGVPTQLWLHRAHHTDPTRVPAMADA CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHH WTGQVNRWFTRYLLGYDNGVERSPGSVIEQADGTLLKEASWPARGASSVTYFAGGDGAGT HCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCEEEEECCCCCCC GTLLTQPTGGPLAKFTDDARIMALALANANTGEHRSRFETAPVASATRLSGTATARVRLT CCEEECCCCCCCHHCCCCCEEEEEEEECCCCCCHHHHHCCCCCCCHHCCCCCEEEEEEEE FSATANVTALLIDRAPDGSATIITRAWTDPRNRLSSWFSEPVLPGMPYDLRLAFMPRDYR EECCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEE LEAGHRLGLVVLSSDNEATLRPTPGTELTLDPAGTSVTVPLLPA ECCCCEEEEEEECCCCCEEECCCCCCEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12721629 [H]