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The map label for this gene is fadH

Identifier: 53722919

GI number: 53722919

Start: 2573880

End: 2575913

Strand: Reverse

Name: fadH

Synonym: BPSS1898

Alternate gene names: 53722919

Gene position: 2575913-2573880 (Counterclockwise)

Preceding gene: 53722921

Following gene: 53722918

Centisome position: 81.18

GC content: 68.68

Gene sequence:

>2034_bases
ATGACGACTCCATTTCCGCACCTGCTCGCCCCGCTCGATCTCGGCTTCACGACGCTGCGCAACCGCGTGCTGATGGGCTC
GATGCACACGGGTCTCGAGGACAGCCGCAAGACGCTGCCGCGCCTCGCCGACTATTTCGCCGAGCGCGCGCGCGGCGGCG
TCGGCCTGATCGTCACGGGCGGCTTCGCGCCGAACGTCGCCGGCTGGACGAAGCCGTTCGGCGGCACGCTGTCGACGGGG
GCCGCCGCGCGCCGGCATCGCGTGATTCCGGACGCGGTGCACGCGCACGGCGGCAAGATCGCGCTGCAGATCCTGCATAC
CGGCCGCTACGGCTATCATCCGTTCGCGGTCGCGCCGACGCGGCTCAAATCGCCGATCTCGCCGTTCACGCCGCATGAGT
TGAGCGCGCGCGGCATCGAGCGGCAGATTCGCGCGTTCGTGCGCTGCGCGCAGCTCGCGCGCGAGGCGGGCTACGACGGC
GTCGAGATCATGGGCTCCGAAGGCTACCTGATCAACCAGTTCATCTCGCTGCATACGAACAAGCGCACCGACGAATGGGG
CGGCTCGTACGCGAACCGGATGCGGCTGCCGGTCGAGATCGTCGAGCGTACGCGCGAGGCGGTGGGCCGCGATTTCATCA
TCGTCTACCGGCTGTCGATGCTCGATCTGATTCCCGACGGCAGCAACTGGGACGAAGTCGTGCTGCTCGCGAAGGCGGTC
GAGCGCGCGGGCGCGACGATCATCAACACCGGCATCGGCTGGCACGAGGCGCGCGTGCCGACGATCGCGACCTCGGTGCC
GCGCGGCGCGTTTGCGTGGGTGACGAAGAAGATGAAGGGCGAGGTCGGCATTCCGCTCGTGACGACGAACCGTATCAACC
GGCCGGAAATCGCCGAGCAGATTCTCGCGGACGGCTGCGCGGACATGGTGTCGATGGCGCGGCCGTTTCTCGCCGATGCG
GAATTCGTGAAGAAGGCGGCTGAAGGCCGCGTCGACGAGATCAACACGTGCATCGGCTGCAATCAGGCATGCCTCGATCA
CGCGTTCAAGAATCAGATCGCGTCTTGCCTGCTGAATCCGCGCGCATGCCACGAAACGGAGCTGAACTACACGCGCGCGG
CAAGCGCGAAGCGCGTCGCGGTGATCGGCGCGGGGCCGGCCGGCCTCGCGTGCGCGACGGTGCTCGCGCAGCGCGGCCAT
CGCGTCGAGCTGTTCGACGCGGCGGCCGAGATCGGCGGCCAGTTCAACATGGCCAAGCGCATTCCGGGCAAGGAGGAGTT
TCACGAGGCGCTGCGATACTTCGCACGCCAGATCGAGCTCGCGGGCGTGCAACTGCGGCTGAATCGCCGCGTCGACGCGG
CCGAGCTGATCGCGGCCGGCTACGACGACGTCGTGCTCGCGACGGGCGTGGCGCCGCGCAACCCGCGCATTCCGGGCCAG
GATCATCCGAAGGTGCTGACCTATATCGACGTGCTCGCGCGCAACAAGCCGGTCGGCGAGCGCGTCGCGGTGATCGGCGC
GGGCGGGATCGGCTTCGACGTGTCGGAGTTCCTTGTTCAGGATGGCGAATCGCCGGCGCTCGATCTCGACGCGTGGAAGG
CGGAGTGGGGCGTGACCGATCCCGCGCTCGCGCGCGGCGGCGTGGTGCGCGGCGAGGTTGCGCCGCCGGCGCGCCGTATC
ACGCTGCTGCAACGCAAGGCGACCGGGCTCGGCAAGGGGCTCGGCAAGACCACCGGCTGGATTCACCGCGCGACGCTGAA
GATGAAGCAGGTCGAGATGATCGGCGGCGTGAATTACGAACTGATCGACGACAAGGGGCTGCATGTGACGTTCGGCAAGG
AGCGCCGCGATCCGACCGTGATCGAGGCCGATACGATCGTGCTGTGCGCGGGACAGGAGCCCGAGCGCGCGCTGTACGAG
CCGCTGAAGGCGGCGGGCGTGCCGGTGCATCTGATCGGCGGCGCGGAACTGGCCGCGGAGCTCGACGCGAAGCGCGCGAT
CGATCAGGGCGCGAGGCTCGCCGCGCGGCTCTGA

Upstream 100 bases:

>100_bases
AATGACAAGCATTATGGCTATTTGCGCCCTCACGGACAAGCGGTGCGCGCGCGTACGATGTGGCTGACGATCCCGATGAC
TCCCATGCCCGCGATACCCG

Downstream 100 bases:

>100_bases
GCGCGAGGCGGGGCGGGGTGGCGTGCGGCGGCGTGAAGCTCGTGCGTTCGTCGCGTGTTCGCGCAGCGCGCGGTGCGGGC
AGCGGCGTGCGCGTCGATGA

Product: 2,4-dienoyl-CoA reductase (NADPH)

Products: NA

Alternate protein names: 2,4-dienoyl coenzyme A reductase [H]

Number of amino acids: Translated: 677; Mature: 676

Protein sequence:

>677_residues
MTTPFPHLLAPLDLGFTTLRNRVLMGSMHTGLEDSRKTLPRLADYFAERARGGVGLIVTGGFAPNVAGWTKPFGGTLSTG
AAARRHRVIPDAVHAHGGKIALQILHTGRYGYHPFAVAPTRLKSPISPFTPHELSARGIERQIRAFVRCAQLAREAGYDG
VEIMGSEGYLINQFISLHTNKRTDEWGGSYANRMRLPVEIVERTREAVGRDFIIVYRLSMLDLIPDGSNWDEVVLLAKAV
ERAGATIINTGIGWHEARVPTIATSVPRGAFAWVTKKMKGEVGIPLVTTNRINRPEIAEQILADGCADMVSMARPFLADA
EFVKKAAEGRVDEINTCIGCNQACLDHAFKNQIASCLLNPRACHETELNYTRAASAKRVAVIGAGPAGLACATVLAQRGH
RVELFDAAAEIGGQFNMAKRIPGKEEFHEALRYFARQIELAGVQLRLNRRVDAAELIAAGYDDVVLATGVAPRNPRIPGQ
DHPKVLTYIDVLARNKPVGERVAVIGAGGIGFDVSEFLVQDGESPALDLDAWKAEWGVTDPALARGGVVRGEVAPPARRI
TLLQRKATGLGKGLGKTTGWIHRATLKMKQVEMIGGVNYELIDDKGLHVTFGKERRDPTVIEADTIVLCAGQEPERALYE
PLKAAGVPVHLIGGAELAAELDAKRAIDQGARLAARL

Sequences:

>Translated_677_residues
MTTPFPHLLAPLDLGFTTLRNRVLMGSMHTGLEDSRKTLPRLADYFAERARGGVGLIVTGGFAPNVAGWTKPFGGTLSTG
AAARRHRVIPDAVHAHGGKIALQILHTGRYGYHPFAVAPTRLKSPISPFTPHELSARGIERQIRAFVRCAQLAREAGYDG
VEIMGSEGYLINQFISLHTNKRTDEWGGSYANRMRLPVEIVERTREAVGRDFIIVYRLSMLDLIPDGSNWDEVVLLAKAV
ERAGATIINTGIGWHEARVPTIATSVPRGAFAWVTKKMKGEVGIPLVTTNRINRPEIAEQILADGCADMVSMARPFLADA
EFVKKAAEGRVDEINTCIGCNQACLDHAFKNQIASCLLNPRACHETELNYTRAASAKRVAVIGAGPAGLACATVLAQRGH
RVELFDAAAEIGGQFNMAKRIPGKEEFHEALRYFARQIELAGVQLRLNRRVDAAELIAAGYDDVVLATGVAPRNPRIPGQ
DHPKVLTYIDVLARNKPVGERVAVIGAGGIGFDVSEFLVQDGESPALDLDAWKAEWGVTDPALARGGVVRGEVAPPARRI
TLLQRKATGLGKGLGKTTGWIHRATLKMKQVEMIGGVNYELIDDKGLHVTFGKERRDPTVIEADTIVLCAGQEPERALYE
PLKAAGVPVHLIGGAELAAELDAKRAIDQGARLAARL
>Mature_676_residues
TTPFPHLLAPLDLGFTTLRNRVLMGSMHTGLEDSRKTLPRLADYFAERARGGVGLIVTGGFAPNVAGWTKPFGGTLSTGA
AARRHRVIPDAVHAHGGKIALQILHTGRYGYHPFAVAPTRLKSPISPFTPHELSARGIERQIRAFVRCAQLAREAGYDGV
EIMGSEGYLINQFISLHTNKRTDEWGGSYANRMRLPVEIVERTREAVGRDFIIVYRLSMLDLIPDGSNWDEVVLLAKAVE
RAGATIINTGIGWHEARVPTIATSVPRGAFAWVTKKMKGEVGIPLVTTNRINRPEIAEQILADGCADMVSMARPFLADAE
FVKKAAEGRVDEINTCIGCNQACLDHAFKNQIASCLLNPRACHETELNYTRAASAKRVAVIGAGPAGLACATVLAQRGHR
VELFDAAAEIGGQFNMAKRIPGKEEFHEALRYFARQIELAGVQLRLNRRVDAAELIAAGYDDVVLATGVAPRNPRIPGQD
HPKVLTYIDVLARNKPVGERVAVIGAGGIGFDVSEFLVQDGESPALDLDAWKAEWGVTDPALARGGVVRGEVAPPARRIT
LLQRKATGLGKGLGKTTGWIHRATLKMKQVEMIGGVNYELIDDKGLHVTFGKERRDPTVIEADTIVLCAGQEPERALYEP
LKAAGVPVHLIGGAELAAELDAKRAIDQGARLAARL

Specific function: Catalyzes the NADP-dependent reduction of 2,4-dienoyl- CoA to yield trans-2- enoyl-CoA [H]

COG id: COG1902

COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789463, Length=675, Percent_Identity=60.2962962962963, Blast_Score=823, Evalue=0.0,
Organism=Escherichia coli, GI1787939, Length=344, Percent_Identity=27.3255813953488, Blast_Score=95, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17565138, Length=191, Percent_Identity=29.8429319371728, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17559802, Length=212, Percent_Identity=28.7735849056604, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17559804, Length=253, Percent_Identity=26.4822134387352, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17564188, Length=256, Percent_Identity=26.5625, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17540738, Length=265, Percent_Identity=24.9056603773585, Blast_Score=75, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17566914, Length=230, Percent_Identity=26.0869565217391, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI72001454, Length=113, Percent_Identity=33.6283185840708, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6325086, Length=223, Percent_Identity=27.8026905829596, Blast_Score=78, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6321973, Length=227, Percent_Identity=27.7533039647577, Blast_Score=77, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR013027
- InterPro:   IPR001155 [H]

Pfam domain/function: PF00724 Oxidored_FMN; PF07992 Pyr_redox_2 [H]

EC number: =1.3.1.34 [H]

Molecular weight: Translated: 73260; Mature: 73129

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPFPHLLAPLDLGFTTLRNRVLMGSMHTGLEDSRKTLPRLADYFAERARGGVGLIVTG
CCCCCCHHHHHHHCCHHHHHHHHEECHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
GFAPNVAGWTKPFGGTLSTGAAARRHRVIPDAVHAHGGKIALQILHTGRYGYHPFAVAPT
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCCCEEEEEEEECCCCCCCCEEECCH
RLKSPISPFTPHELSARGIERQIRAFVRCAQLAREAGYDGVEIMGSEGYLINQFISLHTN
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHCC
KRTDEWGGSYANRMRLPVEIVERTREAVGRDFIIVYRLSMLDLIPDGSNWDEVVLLAKAV
CCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHH
ERAGATIINTGIGWHEARVPTIATSVPRGAFAWVTKKMKGEVGIPLVTTNRINRPEIAEQ
HHCCCEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHH
ILADGCADMVSMARPFLADAEFVKKAAEGRVDEINTCIGCNQACLDHAFKNQIASCLLNP
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
RACHETELNYTRAASAKRVAVIGAGPAGLACATVLAQRGHRVELFDAAAEIGGQFNMAKR
CCCCCCCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCHHHC
IPGKEEFHEALRYFARQIELAGVQLRLNRRVDAAELIAAGYDDVVLATGVAPRNPRIPGQ
CCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCC
DHPKVLTYIDVLARNKPVGERVAVIGAGGIGFDVSEFLVQDGESPALDLDAWKAEWGVTD
CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHCCCCCC
PALARGGVVRGEVAPPARRITLLQRKATGLGKGLGKTTGWIHRATLKMKQVEMIGGVNYE
HHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
LIDDKGLHVTFGKERRDPTVIEADTIVLCAGQEPERALYEPLKAAGVPVHLIGGAELAAE
EECCCCCEEEECCCCCCCCEEEECEEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHH
LDAKRAIDQGARLAARL
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTPFPHLLAPLDLGFTTLRNRVLMGSMHTGLEDSRKTLPRLADYFAERARGGVGLIVTG
CCCCCHHHHHHHCCHHHHHHHHEECHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
GFAPNVAGWTKPFGGTLSTGAAARRHRVIPDAVHAHGGKIALQILHTGRYGYHPFAVAPT
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCCCEEEEEEEECCCCCCCCEEECCH
RLKSPISPFTPHELSARGIERQIRAFVRCAQLAREAGYDGVEIMGSEGYLINQFISLHTN
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHCC
KRTDEWGGSYANRMRLPVEIVERTREAVGRDFIIVYRLSMLDLIPDGSNWDEVVLLAKAV
CCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHH
ERAGATIINTGIGWHEARVPTIATSVPRGAFAWVTKKMKGEVGIPLVTTNRINRPEIAEQ
HHCCCEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHH
ILADGCADMVSMARPFLADAEFVKKAAEGRVDEINTCIGCNQACLDHAFKNQIASCLLNP
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
RACHETELNYTRAASAKRVAVIGAGPAGLACATVLAQRGHRVELFDAAAEIGGQFNMAKR
CCCCCCCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCHHHC
IPGKEEFHEALRYFARQIELAGVQLRLNRRVDAAELIAAGYDDVVLATGVAPRNPRIPGQ
CCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCC
DHPKVLTYIDVLARNKPVGERVAVIGAGGIGFDVSEFLVQDGESPALDLDAWKAEWGVTD
CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHCCCCCC
PALARGGVVRGEVAPPARRITLLQRKATGLGKGLGKTTGWIHRATLKMKQVEMIGGVNYE
HHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
LIDDKGLHVTFGKERRDPTVIEADTIVLCAGQEPERALYEPLKAAGVPVHLIGGAELAAE
EECCCCCEEEECCCCCCCCEEEECEEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHH
LDAKRAIDQGARLAARL
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9346310; 9278503 [H]