| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is yhiN [H]
Identifier: 53722780
GI number: 53722780
Start: 2412243
End: 2413466
Strand: Reverse
Name: yhiN [H]
Synonym: BPSS1759
Alternate gene names: 53722780
Gene position: 2413466-2412243 (Counterclockwise)
Preceding gene: 53722782
Following gene: 53722779
Centisome position: 76.06
GC content: 70.1
Gene sequence:
>1224_bases ATGGAAAAATTCGATATCGCGGTGATCGGCGCGGGCGCGGCCGGCATGATGACGGCTGCGGTGGCGGGGCAGCTCGGGCG GCGCGTCGTGCTGCTCGATCACTCGCCACGGCTCGCGGAGAAGATCCGCATCTCGGGCGGCGGGCGCTGCAATTTCACGA ATCTGTACGCGGGGCCGGACAACTATCTGTCCGCGAATCCGCATTTCTGCCGCTCGGCGCTCGCGCGCTACACGCCGCGC GATTTTCTCGGGCTCCTGAAGAACCATCGCGTCACGTGGCACGAGAAGCACAAGGGCCAGCTCTTTTGCGACCATTCGAG CGACGCGATCATCGACGTGCTGAAAAGCGAGTGCGACGCGGGCGGCGTCGCATGGCGGCGGCCGGTGACGGTCGACGCGG TGCGGCACGCGCAGGCGGACGGCTTCGCGCTCGATACGAGCGCGGGCGCGATCGGCGCGCAGGCGCTCGTCGTCGCGACG GGCGGATTGTCGATCCCGAAGATCGGCGCGACCGATTTCGCTTACCGGATCGCGAAACAGTTCGGCCACAAGCTCGTCGA TACGCGGCCGGCGCTCGTGCCGCTGACCTTTTCGGCCGATGCGTGGGCGCCGTTCGCCGCGCTGTCGGGCGTGTCGCTCG AGGCGCGGGTGTCGACCGGCGCGAAGCGGGGCGGCGGTGAGTTCGTCGAGGACATCCTGCTCACCCATCGCGGACTGTCC GGGCCGGGCATCCTGCAGATTTCGAGCTACTGGCGCTCGGGCGAGCCGATTCACGTCGATCTCGCGCCGCAAATCGACGC GGCGAACGAGCTGATTCGCGCGAAGGCCGGCTCGCGCCGCCAGATCGGCACGCTGCTCGCCGAATGGGTGCCCGCGCGGC TCGCGCACGCGTGGCTCGAGGCGGAGCGGGTGCACGCGGACGCACGGCTTGCCGACCTGCCGGACAAGACGCTGCGCCGC ATCGGCGAGACGCTGTCGCGCTGGACGCTCACGCCGAGCGGCACCGAGGGCTACCGGAAGGCCGAGGTGACGAAAGGCGG GGTCGACACGCGCGAGCTGTCGTCGGCGACGATGATGAGCGAGCGCGTGCCGGGCCTGTTCTTCGTCGGCGAGGCGCTCG ACGTGACGGGTTGGCTCGGCGGCTACAATTTCCAGTGGGCATGGGCGTCGGGCGTCGCGGCCGGGCGCGCGGCCGCCGAC GGCACGCGGCGCTTGACGGGTTAG
Upstream 100 bases:
>100_bases ACGGCCGGAAAATCAACGTAACAGAAAAGTATAACAGCGCGGCCGCTTCGCCAGCCGGCGCGCGGGCGAAGGGGCACGCG ACGCGGGTACAATCCGCGCC
Downstream 100 bases:
>100_bases TGCGTTTGTGCAAAGCGTCTGCTATACTCGAAAACCTTTCTCCGCAATACCTTTACTTTCTTTTTTTACGTGACGGGTCA TGACGATCATCCGCGTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MEKFDIAVIGAGAAGMMTAAVAGQLGRRVVLLDHSPRLAEKIRISGGGRCNFTNLYAGPDNYLSANPHFCRSALARYTPR DFLGLLKNHRVTWHEKHKGQLFCDHSSDAIIDVLKSECDAGGVAWRRPVTVDAVRHAQADGFALDTSAGAIGAQALVVAT GGLSIPKIGATDFAYRIAKQFGHKLVDTRPALVPLTFSADAWAPFAALSGVSLEARVSTGAKRGGGEFVEDILLTHRGLS GPGILQISSYWRSGEPIHVDLAPQIDAANELIRAKAGSRRQIGTLLAEWVPARLAHAWLEAERVHADARLADLPDKTLRR IGETLSRWTLTPSGTEGYRKAEVTKGGVDTRELSSATMMSERVPGLFFVGEALDVTGWLGGYNFQWAWASGVAAGRAAAD GTRRLTG
Sequences:
>Translated_407_residues MEKFDIAVIGAGAAGMMTAAVAGQLGRRVVLLDHSPRLAEKIRISGGGRCNFTNLYAGPDNYLSANPHFCRSALARYTPR DFLGLLKNHRVTWHEKHKGQLFCDHSSDAIIDVLKSECDAGGVAWRRPVTVDAVRHAQADGFALDTSAGAIGAQALVVAT GGLSIPKIGATDFAYRIAKQFGHKLVDTRPALVPLTFSADAWAPFAALSGVSLEARVSTGAKRGGGEFVEDILLTHRGLS GPGILQISSYWRSGEPIHVDLAPQIDAANELIRAKAGSRRQIGTLLAEWVPARLAHAWLEAERVHADARLADLPDKTLRR IGETLSRWTLTPSGTEGYRKAEVTKGGVDTRELSSATMMSERVPGLFFVGEALDVTGWLGGYNFQWAWASGVAAGRAAAD GTRRLTG >Mature_407_residues MEKFDIAVIGAGAAGMMTAAVAGQLGRRVVLLDHSPRLAEKIRISGGGRCNFTNLYAGPDNYLSANPHFCRSALARYTPR DFLGLLKNHRVTWHEKHKGQLFCDHSSDAIIDVLKSECDAGGVAWRRPVTVDAVRHAQADGFALDTSAGAIGAQALVVAT GGLSIPKIGATDFAYRIAKQFGHKLVDTRPALVPLTFSADAWAPFAALSGVSLEARVSTGAKRGGGEFVEDILLTHRGLS GPGILQISSYWRSGEPIHVDLAPQIDAANELIRAKAGSRRQIGTLLAEWVPARLAHAWLEAERVHADARLADLPDKTLRR IGETLSRWTLTPSGTEGYRKAEVTKGGVDTRELSSATMMSERVPGLFFVGEALDVTGWLGGYNFQWAWASGVAAGRAAAD GTRRLTG
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=405, Percent_Identity=47.9012345679012, Blast_Score=367, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 43570; Mature: 43570
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFDIAVIGAGAAGMMTAAVAGQLGRRVVLLDHSPRLAEKIRISGGGRCNFTNLYAGPD CCCEEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCHHHEEEECCCCEECEEEEECCCC NYLSANPHFCRSALARYTPRDFLGLLKNHRVTWHEKHKGQLFCDHSSDAIIDVLKSECDA CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCEEEECCCHHHHHHHHHHCCC GGVAWRRPVTVDAVRHAQADGFALDTSAGAIGAQALVVATGGLSIPKIGATDFAYRIAKQ CCCEECCCCCHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH FGHKLVDTRPALVPLTFSADAWAPFAALSGVSLEARVSTGAKRGGGEFVEDILLTHRGLS HHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCC GPGILQISSYWRSGEPIHVDLAPQIDAANELIRAKAGSRRQIGTLLAEWVPARLAHAWLE CCCEEEEEHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AERVHADARLADLPDKTLRRIGETLSRWTLTPSGTEGYRKAEVTKGGVDTRELSSATMMS HHHHHCCCHHHCCCHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHH ERVPGLFFVGEALDVTGWLGGYNFQWAWASGVAAGRAAADGTRRLTG HCCCCEEEECCHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEKFDIAVIGAGAAGMMTAAVAGQLGRRVVLLDHSPRLAEKIRISGGGRCNFTNLYAGPD CCCEEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCHHHEEEECCCCEECEEEEECCCC NYLSANPHFCRSALARYTPRDFLGLLKNHRVTWHEKHKGQLFCDHSSDAIIDVLKSECDA CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCEEEECCCHHHHHHHHHHCCC GGVAWRRPVTVDAVRHAQADGFALDTSAGAIGAQALVVATGGLSIPKIGATDFAYRIAKQ CCCEECCCCCHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH FGHKLVDTRPALVPLTFSADAWAPFAALSGVSLEARVSTGAKRGGGEFVEDILLTHRGLS HHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCC GPGILQISSYWRSGEPIHVDLAPQIDAANELIRAKAGSRRQIGTLLAEWVPARLAHAWLE CCCEEEEEHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AERVHADARLADLPDKTLRRIGETLSRWTLTPSGTEGYRKAEVTKGGVDTRELSSATMMS HHHHHCCCHHHCCCHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHH ERVPGLFFVGEALDVTGWLGGYNFQWAWASGVAAGRAAADGTRRLTG HCCCCEEEECCHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]