| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is yxlA [H]
Identifier: 53722773
GI number: 53722773
Start: 2401848
End: 2403272
Strand: Reverse
Name: yxlA [H]
Synonym: BPSS1752
Alternate gene names: 53722773
Gene position: 2403272-2401848 (Counterclockwise)
Preceding gene: 53722776
Following gene: 53722772
Centisome position: 75.74
GC content: 67.37
Gene sequence:
>1425_bases ATGCCGAACGCCACCGACGCCCAACGCCGAGCGCTGCGCGAACGCCGCACGATCGACTACATCCCCGACCACGAACGCCA CGGCAAGCTCTCGAGCCAGTTCACGCTATGGCTCGGCGCGAACCTGCAGGTGACGGCGATCGTCACCGGCGCGCTCGCGG TCGTGCTGGGCGGCGACGTGTCCTGGTCGCTCGTCGGCCTCGCGCTCGGCCAACTGCTGGGCGCAGCCGTGATGGCACTG CACGGCGCGCAGGGGCCGCAACTCGGCTTGCCGCAGATGATCTCGAGCCGCGTGCAGTTCGGCATCTACGGCGCGGTGAT TCCGCTCGTGCTGGTCTGCCTGATGTACGTCGGCTTCTCCGCAAGCGGCACCGTGCTCGCCGGGCAGGCGCTCGCGCAAC TGTTCGGCGTCGCCGATCCGGTCGGCATCTTCGCGTTCATCGCGGTCGTCGTCGTGCTCGCGGTGTTCGGCTATCGGACG ATTCACGCGCTCGGCCGCGTATCGAGCATCGTCGGCGTCGTCGCGTTCGTCTATATGTTCGTGCGGCTCCTCGCCGGCCA CGACGTGGGCGCGCTGCTCGCGATCCGGCATTTCTCGCTGTCGAGCTTCCTGCTCGCGATCTCGCTGTCCGCCTCGTGGC AGATCGCGTACGGGCCGTACGTCGCCGACTATTCTCGTTATCTGCCGCGCTCGACGTCCGCGCGGCGCACGTTCTGGGCG ATCGGTCTTGGCTCGGTGCTCGGCGCGCAGGCGTCGATGGCATTCGGCGTGTTCGCGGCGGCGCTCGCGGGCAAGCAGTT CGCCGGGCACGAGGTGCAGTTCATCGTGAGCCTCGGCGCGAGCGGCGCGACGGCCGCGCTGCTCTATTTCGCGATCGCGT TCGGCAAGCTGACGATCACGACGCTCAACGCATACGGCAGCGTGATGTCGGTCGCGACGATCGTCACCGGTTTCTCGGGC CGCGCGCAGATCACGCAGCGCGCGCGAATGGCCTATGTGCTCGCGATGGTCGCCGCGGTCGCGTGGCTCGCGCTCGTCGG TCGTCACGCATTCCTGAAGGATTTCTCCGCGTTCATCCTGTTCCTGCTCGCCTTTTTCACGCCGTGGAGCGCGATCAACC TGGTCGATTTCTACTGGGTGACGAGGGAGCGCTACGACGTGCCCGCGCTCTACGATCCCGACGGCCGCTACGGCCGCTGG AACGTCGCGGGCGTATCGATCTACGCGATCGGCGTGCTCGTGCAGATGCCGTTCATCGCGACCGAGTTCTATACCGGGCC GCTCGTCGCGAAGCTCGGCGGCACCGACATCTCGTGGATCATCGGCCTCGTCGTGCCCGGCGTTCTGTATTATGTGACGG CACGCAGGCAGACCGCGCATGTCCCCGAGCGGCTGATCCTGCCGGACGAGCCCTCATTGCCATGA
Upstream 100 bases:
>100_bases GGATGTCGGTACAAACCCGCATCCCGCAAACAGTTGTCTATACAATTTTGAGCGGCTAGGGTGAGCACTCCGAACCTCAG ACATTTCCGGATCCGCCGCC
Downstream 100 bases:
>100_bases CCGTTTCCGCCGTTGTTTCGCCGCAGCCGCAGCCACCGTCGTCATCGCCGTCGCCGGACGCGGCGCCGTTTGCCGATCCG CGCGCGCTCGATGCGCTGCA
Product: transport-related, membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MPNATDAQRRALRERRTIDYIPDHERHGKLSSQFTLWLGANLQVTAIVTGALAVVLGGDVSWSLVGLALGQLLGAAVMAL HGAQGPQLGLPQMISSRVQFGIYGAVIPLVLVCLMYVGFSASGTVLAGQALAQLFGVADPVGIFAFIAVVVVLAVFGYRT IHALGRVSSIVGVVAFVYMFVRLLAGHDVGALLAIRHFSLSSFLLAISLSASWQIAYGPYVADYSRYLPRSTSARRTFWA IGLGSVLGAQASMAFGVFAAALAGKQFAGHEVQFIVSLGASGATAALLYFAIAFGKLTITTLNAYGSVMSVATIVTGFSG RAQITQRARMAYVLAMVAAVAWLALVGRHAFLKDFSAFILFLLAFFTPWSAINLVDFYWVTRERYDVPALYDPDGRYGRW NVAGVSIYAIGVLVQMPFIATEFYTGPLVAKLGGTDISWIIGLVVPGVLYYVTARRQTAHVPERLILPDEPSLP
Sequences:
>Translated_474_residues MPNATDAQRRALRERRTIDYIPDHERHGKLSSQFTLWLGANLQVTAIVTGALAVVLGGDVSWSLVGLALGQLLGAAVMAL HGAQGPQLGLPQMISSRVQFGIYGAVIPLVLVCLMYVGFSASGTVLAGQALAQLFGVADPVGIFAFIAVVVVLAVFGYRT IHALGRVSSIVGVVAFVYMFVRLLAGHDVGALLAIRHFSLSSFLLAISLSASWQIAYGPYVADYSRYLPRSTSARRTFWA IGLGSVLGAQASMAFGVFAAALAGKQFAGHEVQFIVSLGASGATAALLYFAIAFGKLTITTLNAYGSVMSVATIVTGFSG RAQITQRARMAYVLAMVAAVAWLALVGRHAFLKDFSAFILFLLAFFTPWSAINLVDFYWVTRERYDVPALYDPDGRYGRW NVAGVSIYAIGVLVQMPFIATEFYTGPLVAKLGGTDISWIIGLVVPGVLYYVTARRQTAHVPERLILPDEPSLP >Mature_473_residues PNATDAQRRALRERRTIDYIPDHERHGKLSSQFTLWLGANLQVTAIVTGALAVVLGGDVSWSLVGLALGQLLGAAVMALH GAQGPQLGLPQMISSRVQFGIYGAVIPLVLVCLMYVGFSASGTVLAGQALAQLFGVADPVGIFAFIAVVVVLAVFGYRTI HALGRVSSIVGVVAFVYMFVRLLAGHDVGALLAIRHFSLSSFLLAISLSASWQIAYGPYVADYSRYLPRSTSARRTFWAI GLGSVLGAQASMAFGVFAAALAGKQFAGHEVQFIVSLGASGATAALLYFAIAFGKLTITTLNAYGSVMSVATIVTGFSGR AQITQRARMAYVLAMVAAVAWLALVGRHAFLKDFSAFILFLLAFFTPWSAINLVDFYWVTRERYDVPALYDPDGRYGRWN VAGVSIYAIGVLVQMPFIATEFYTGPLVAKLGGTDISWIIGLVVPGVLYYVTARRQTAHVPERLILPDEPSLP
Specific function: Transport Of Allantoin (By Similarity). [C]
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 50755; Mature: 50624
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNATDAQRRALRERRTIDYIPDHERHGKLSSQFTLWLGANLQVTAIVTGALAVVLGGDV CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHCCCCC SWSLVGLALGQLLGAAVMALHGAQGPQLGLPQMISSRVQFGIYGAVIPLVLVCLMYVGFS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASGTVLAGQALAQLFGVADPVGIFAFIAVVVVLAVFGYRTIHALGRVSSIVGVVAFVYMF CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRLLAGHDVGALLAIRHFSLSSFLLAISLSASWQIAYGPYVADYSRYLPRSTSARRTFWA HHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHHCCCCCCCCCEEEE IGLGSVLGAQASMAFGVFAAALAGKQFAGHEVQFIVSLGASGATAALLYFAIAFGKLTIT EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEE TLNAYGSVMSVATIVTGFSGRAQITQRARMAYVLAMVAAVAWLALVGRHAFLKDFSAFIL EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLLAFFTPWSAINLVDFYWVTRERYDVPALYDPDGRYGRWNVAGVSIYAIGVLVQMPFIA HHHHHHCCCCHHHHHHHHEEHHCCCCCCCEECCCCCCCEEEECHHHHHHHHHHHHCCHHH TEFYTGPLVAKLGGTDISWIIGLVVPGVLYYVTARRQTAHVPERLILPDEPSLP HHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCC >Mature Secondary Structure PNATDAQRRALRERRTIDYIPDHERHGKLSSQFTLWLGANLQVTAIVTGALAVVLGGDV CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHCCCCC SWSLVGLALGQLLGAAVMALHGAQGPQLGLPQMISSRVQFGIYGAVIPLVLVCLMYVGFS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASGTVLAGQALAQLFGVADPVGIFAFIAVVVVLAVFGYRTIHALGRVSSIVGVVAFVYMF CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRLLAGHDVGALLAIRHFSLSSFLLAISLSASWQIAYGPYVADYSRYLPRSTSARRTFWA HHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHHCCCCCCCCCEEEE IGLGSVLGAQASMAFGVFAAALAGKQFAGHEVQFIVSLGASGATAALLYFAIAFGKLTIT EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEE TLNAYGSVMSVATIVTGFSGRAQITQRARMAYVLAMVAAVAWLALVGRHAFLKDFSAFIL EEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLLAFFTPWSAINLVDFYWVTRERYDVPALYDPDGRYGRWNVAGVSIYAIGVLVQMPFIA HHHHHHCCCCHHHHHHHHEEHHCCCCCCCEECCCCCCCEEEECHHHHHHHHHHHHCCHHH TEFYTGPLVAKLGGTDISWIIGLVVPGVLYYVTARRQTAHVPERLILPDEPSLP HHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]