| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722723
Identifier: 53722723
GI number: 53722723
Start: 2337384
End: 2338700
Strand: Reverse
Name: 53722723
Synonym: BPSS1703
Alternate gene names: NA
Gene position: 2338700-2337384 (Counterclockwise)
Preceding gene: 53722724
Following gene: 53722722
Centisome position: 73.71
GC content: 78.44
Gene sequence:
>1317_bases GTGCTCGCGCTGGCCGGCGCGAGCGCCGCCTATGCGGCTCCGGATGCGGCGAGCGCCGCGTCCGCCGAGCAGGCCGCGCC GCTCACGATCACCGTGCGGCCGGGCCAGTCGCTCAACGACATTGCCGTGGCCGTCACGCAATCGCACGATCCCGGCGTGC TGGCCCGCGCGGGCCGCGCGCTCTTCGACGCGAACCCGCAGGCGTTCATGAAGCGCGATCCGAGCCGCCTGAAGATCGGT GCGCAATTGATGGTGCCGGCGCTCGACGCGACGGGGGGCGCGGCGGCGAGCGGCGCGACGGCGGCTTCGGCCGCTGCGTC GGCTGCGTCGGCTGCGTCGGCTGCGTCGGCTGCGTCGGCTGCGTCGACCTCGGCGGTGACGGGCGCGGCGCCGCATCCGT CGGCTTCGGCTTCGGCGCCGGCCGCGGCGTCGCGCCCGGCGGCGGCGTCGGGCGCGACGCATGCCGCGACGGCGAGCGGC GCGGCGGCGTTCGCGGCTTCCGGCGTCGCCGCCGGTTCGGCCTCAGGGGCGAACGGCGCGTCGGCGCCCGGCGTGTCGGC GCCCGGTGCGGCGTCGGCACATGCGCCGTCCGCGGTTGCGCCGGCGGCGCCGGTCGCCTCGTCCGGGGCCGGTAGCGCGC ATGTCTGGAGCGGTTCGATTCAGCAGGCGCCGGCCGGCGCGAACGGCGCATCGGCCGCCGGCGCGGAAGCATTGCTCGCG CCCGGCGCGGCGAATCGCGCGCCGTCGGGTTCGGGCGCGCAAGCGGCGGGCGCTTCGCAGGCGCGGCCGTCGAGCCTGCA GCAATTGCTCGCGCTGAAGAACCGCGTGTTGATGGAGTTGCAGAAGCACGGCATCGGCAAGCCGGCCGCGAACGTCGCGC CGGCGCCGGCCGCCGGAAGTGCGCAGAAGCCGCAGGCGAGCGCCGCGGCCGGTGCCGCGGCGTCGGCGACGGCCGCGGCG ACGACGGCCTCCGAGACCATCGCGTCCGACGCGGCGGCCGGATCGGCGGCGAGCGCCACGCCGGCGTCCGCCGCACCCGC GGCGTCGATGCCCGCCGCGGCGCCGAGCGTGAGCGCGCCGGCGCACGCGGCGGCGCCGCAGGCGCCGTTCAACACGGGCG CGGCGGTCGCGATCGGTGCGGCGCTCGCTGCGCTGATCGTGGGCTTCGCGTTGCGGCGACGCAAGAAGGGCGCGTCCGCC GACGCGATCGAACCGGGCGCGTTCACGCCGGCGCCCGCGCTCGATCCGGATGCGGCCGCCGCGATCGCCGACGCACCCGC CGGGCCGGAGGCGGCGGAGGACGCACGGCATGACTAG
Upstream 100 bases:
>100_bases GCGTCATGCCGCGGCGACCATGCCGATGACGCCTCGACTCCTTTCTTCGACGACGATCTTTGATGGCCTGCCGCGCGCGC GGCGCGCCGTCGCGCTCGCC
Downstream 100 bases:
>100_bases GCCGAGCCGGATAAGGCGGCTGCCGCGCGGCGCGCCTCAAGCGCCGCGCCGCTTGCCGAGGCGAAGCGCCCGCCGGCGCA GCATGGCTCGGAGCCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MLALAGASAAYAAPDAASAASAEQAAPLTITVRPGQSLNDIAVAVTQSHDPGVLARAGRALFDANPQAFMKRDPSRLKIG AQLMVPALDATGGAAASGATAASAAASAASAASAASAASAASTSAVTGAAPHPSASASAPAAASRPAAASGATHAATASG AAAFAASGVAAGSASGANGASAPGVSAPGAASAHAPSAVAPAAPVASSGAGSAHVWSGSIQQAPAGANGASAAGAEALLA PGAANRAPSGSGAQAAGASQARPSSLQQLLALKNRVLMELQKHGIGKPAANVAPAPAAGSAQKPQASAAAGAAASATAAA TTASETIASDAAAGSAASATPASAAPAASMPAAAPSVSAPAHAAAPQAPFNTGAAVAIGAALAALIVGFALRRRKKGASA DAIEPGAFTPAPALDPDAAAAIADAPAGPEAAEDARHD
Sequences:
>Translated_438_residues MLALAGASAAYAAPDAASAASAEQAAPLTITVRPGQSLNDIAVAVTQSHDPGVLARAGRALFDANPQAFMKRDPSRLKIG AQLMVPALDATGGAAASGATAASAAASAASAASAASAASAASTSAVTGAAPHPSASASAPAAASRPAAASGATHAATASG AAAFAASGVAAGSASGANGASAPGVSAPGAASAHAPSAVAPAAPVASSGAGSAHVWSGSIQQAPAGANGASAAGAEALLA PGAANRAPSGSGAQAAGASQARPSSLQQLLALKNRVLMELQKHGIGKPAANVAPAPAAGSAQKPQASAAAGAAASATAAA TTASETIASDAAAGSAASATPASAAPAASMPAAAPSVSAPAHAAAPQAPFNTGAAVAIGAALAALIVGFALRRRKKGASA DAIEPGAFTPAPALDPDAAAAIADAPAGPEAAEDARHD >Mature_438_residues MLALAGASAAYAAPDAASAASAEQAAPLTITVRPGQSLNDIAVAVTQSHDPGVLARAGRALFDANPQAFMKRDPSRLKIG AQLMVPALDATGGAAASGATAASAAASAASAASAASAASAASTSAVTGAAPHPSASASAPAAASRPAAASGATHAATASG AAAFAASGVAAGSASGANGASAPGVSAPGAASAHAPSAVAPAAPVASSGAGSAHVWSGSIQQAPAGANGASAAGAEALLA PGAANRAPSGSGAQAAGASQARPSSLQQLLALKNRVLMELQKHGIGKPAANVAPAPAAGSAQKPQASAAAGAAASATAAA TTASETIASDAAAGSAASATPASAAPAASMPAAAPSVSAPAHAAAPQAPFNTGAAVAIGAALAALIVGFALRRRKKGASA DAIEPGAFTPAPALDPDAAAAIADAPAGPEAAEDARHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39865; Mature: 39865
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALAGASAAYAAPDAASAASAEQAAPLTITVRPGQSLNDIAVAVTQSHDPGVLARAGRA CEEECCCCCHHCCCCHHHHCCHHCCCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHCCH LFDANPQAFMKRDPSRLKIGAQLMVPALDATGGAAASGATAASAAASAASAASAASAASA HHCCCHHHHHHCCCHHEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ASTSAVTGAAPHPSASASAPAAASRPAAASGATHAATASGAAAFAASGVAAGSASGANGA HCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCC SAPGVSAPGAASAHAPSAVAPAAPVASSGAGSAHVWSGSIQQAPAGANGASAAGAEALLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCCHHHCC PGAANRAPSGSGAQAAGASQARPSSLQQLLALKNRVLMELQKHGIGKPAANVAPAPAAGS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AQKPQASAAAGAAASATAAATTASETIASDAAAGSAASATPASAAPAASMPAAAPSVSAP CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC AHAAAPQAPFNTGAAVAIGAALAALIVGFALRRRKKGASADAIEPGAFTPAPALDPDAAA CHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH AIADAPAGPEAAEDARHD HHHCCCCCCCHHHHCCCC >Mature Secondary Structure MLALAGASAAYAAPDAASAASAEQAAPLTITVRPGQSLNDIAVAVTQSHDPGVLARAGRA CEEECCCCCHHCCCCHHHHCCHHCCCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHCCH LFDANPQAFMKRDPSRLKIGAQLMVPALDATGGAAASGATAASAAASAASAASAASAASA HHCCCHHHHHHCCCHHEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ASTSAVTGAAPHPSASASAPAAASRPAAASGATHAATASGAAAFAASGVAAGSASGANGA HCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCC SAPGVSAPGAASAHAPSAVAPAAPVASSGAGSAHVWSGSIQQAPAGANGASAAGAEALLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCCHHHCC PGAANRAPSGSGAQAAGASQARPSSLQQLLALKNRVLMELQKHGIGKPAANVAPAPAAGS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AQKPQASAAAGAAASATAAATTASETIASDAAAGSAASATPASAAPAASMPAAAPSVSAP CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC AHAAAPQAPFNTGAAVAIGAALAALIVGFALRRRKKGASADAIEPGAFTPAPALDPDAAA CHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH AIADAPAGPEAAEDARHD HHHCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA