| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722722
Identifier: 53722722
GI number: 53722722
Start: 2336094
End: 2337227
Strand: Reverse
Name: 53722722
Synonym: BPSS1702
Alternate gene names: NA
Gene position: 2337227-2336094 (Counterclockwise)
Preceding gene: 53722723
Following gene: 53722721
Centisome position: 73.66
GC content: 74.34
Gene sequence:
>1134_bases TTGACACTCAAGACTCCTCGGCCGGATGAGCAAGGCGGCGCGCCGCAATCGGCGGGCGACGAGCCGTCCGGCGCGAAGCC GGCGCTGTACGCATGGCGGCAGGCGTTTCCGAGCGACGCGATCGCGGCGCTCGACAGTCTCGACATGCCGCTGCCGCCGC GCGAAGCGGGGGCCATCGCGGATCGGCCGGAACAATCGCAACATGCGGAGCCAGCCGGTTCGCGCGGCGCGCAAAGCGCA ACTAACGGTCTGTCCGCCACCCCTCCGCCGATGGGGGCGGAAAATGCGCGTGAAGGGCAGACGCACGGCGAAGCGGGAAG CGCGACGGATTTTGAAGGGGCCGGATCATTCGACAATGATGCTCGCGTCGCGCCGCAGCGGCCGGAAGGCGCGACGCCAC GTCCCGTGACGGCGCCGGACGCGATGGGCCGAGACGAAGCGGCGGCGCGGGCGGCCGAGTCTTCGCCGACCGAATCGACG CGCGATGCGCCGCGAACCCCGGGCGCGCCGGCGGCCGAATCCCGACTGTCCACGGCGGGGGCGGGCGCCGCGCATTCGCC GATGCCGGATGCGGCGGCCGCTGCCGAAGCAACCGCGCCGCACGCGGCGACGCCGCCCGATGCCGCGCCGCACGACGACG GGCAAACGCAAGCCGCGCCGCGCCCGCTCGACGGCGGGCCGCAGCCGCCAGCCGCCGCGCGGCACGAAGCCGCGCCGGCG CACGCCGAAATACCGAACGCGCCGCTTGCCCCGGCGGCGCCGGCCTGGGCGGCCCCGCAACCGCCCGGCATGTCGTTTGC CGAGCCGGCGCCGGCCGAGCCGGGCGACGTCCCGGCCGCGCCGGACCGCGCGCCGGCCGCGAACCCGCCGCCGCTCGGCG TCGCGCAATTCGGCGCGCTGAACCTCGATTTCGATCTCGAGCTGCCGTCCGGCCCGAGCGCGTCGCTGCCGGCGTTCACG CCCGAGGCGCTCGCGAAGATCGCGCGCAACAAGCTCGAACTCGCGTCCGAATACGTCGAGCTCGGCGATCTGGCCGGCGC GCGCACGCTGCTGCACGAAGTGATCGAAGCCGATCACGCCGACACGCGCGACGAAGCGCGCGTGATGCTCGCGAAACTCG CCGATCTGTCGTGA
Upstream 100 bases:
>100_bases CGAGGCGAAGCGCCCGCCGGCGCAGCATGGCTCGGAGCCGCCGTCGGCCGACGAGGACGCCGCGCCGGCTCGCGAGCCGC AAGCGCTGGCCGCGCAGCCG
Downstream 100 bases:
>100_bases TGAGAATCGCACTCGGCATTCAGTACGACGGCGCGGCGTTCTGCGGCTGGCAGTCGCAGCCCCACGGCAAGACGGTTCAG GACGCGCTCGAGCGCTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: FimV C-Terminal Domain-Containing Protein; FimV C-Terminal Domain Protein
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MTLKTPRPDEQGGAPQSAGDEPSGAKPALYAWRQAFPSDAIAALDSLDMPLPPREAGAIADRPEQSQHAEPAGSRGAQSA TNGLSATPPPMGAENAREGQTHGEAGSATDFEGAGSFDNDARVAPQRPEGATPRPVTAPDAMGRDEAAARAAESSPTEST RDAPRTPGAPAAESRLSTAGAGAAHSPMPDAAAAAEATAPHAATPPDAAPHDDGQTQAAPRPLDGGPQPPAAARHEAAPA HAEIPNAPLAPAAPAWAAPQPPGMSFAEPAPAEPGDVPAAPDRAPAANPPPLGVAQFGALNLDFDLELPSGPSASLPAFT PEALAKIARNKLELASEYVELGDLAGARTLLHEVIEADHADTRDEARVMLAKLADLS
Sequences:
>Translated_377_residues MTLKTPRPDEQGGAPQSAGDEPSGAKPALYAWRQAFPSDAIAALDSLDMPLPPREAGAIADRPEQSQHAEPAGSRGAQSA TNGLSATPPPMGAENAREGQTHGEAGSATDFEGAGSFDNDARVAPQRPEGATPRPVTAPDAMGRDEAAARAAESSPTEST RDAPRTPGAPAAESRLSTAGAGAAHSPMPDAAAAAEATAPHAATPPDAAPHDDGQTQAAPRPLDGGPQPPAAARHEAAPA HAEIPNAPLAPAAPAWAAPQPPGMSFAEPAPAEPGDVPAAPDRAPAANPPPLGVAQFGALNLDFDLELPSGPSASLPAFT PEALAKIARNKLELASEYVELGDLAGARTLLHEVIEADHADTRDEARVMLAKLADLS >Mature_376_residues TLKTPRPDEQGGAPQSAGDEPSGAKPALYAWRQAFPSDAIAALDSLDMPLPPREAGAIADRPEQSQHAEPAGSRGAQSAT NGLSATPPPMGAENAREGQTHGEAGSATDFEGAGSFDNDARVAPQRPEGATPRPVTAPDAMGRDEAAARAAESSPTESTR DAPRTPGAPAAESRLSTAGAGAAHSPMPDAAAAAEATAPHAATPPDAAPHDDGQTQAAPRPLDGGPQPPAAARHEAAPAH AEIPNAPLAPAAPAWAAPQPPGMSFAEPAPAEPGDVPAAPDRAPAANPPPLGVAQFGALNLDFDLELPSGPSASLPAFTP EALAKIARNKLELASEYVELGDLAGARTLLHEVIEADHADTRDEARVMLAKLADLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37981; Mature: 37849
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKTPRPDEQGGAPQSAGDEPSGAKPALYAWRQAFPSDAIAALDSLDMPLPPREAGAIA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHCCCCC DRPEQSQHAEPAGSRGAQSATNGLSATPPPMGAENAREGQTHGEAGSATDFEGAGSFDND CCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ARVAPQRPEGATPRPVTAPDAMGRDEAAARAAESSPTESTRDAPRTPGAPAAESRLSTAG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHCC AGAAHSPMPDAAAAAEATAPHAATPPDAAPHDDGQTQAAPRPLDGGPQPPAAARHEAAPA CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC HAEIPNAPLAPAAPAWAAPQPPGMSFAEPAPAEPGDVPAAPDRAPAANPPPLGVAQFGAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCEE NLDFDLELPSGPSASLPAFTPEALAKIARNKLELASEYVELGDLAGARTLLHEVIEADHA CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DTRDEARVMLAKLADLS CCHHHHHHHHHHHHCCC >Mature Secondary Structure TLKTPRPDEQGGAPQSAGDEPSGAKPALYAWRQAFPSDAIAALDSLDMPLPPREAGAIA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHCCCCC DRPEQSQHAEPAGSRGAQSATNGLSATPPPMGAENAREGQTHGEAGSATDFEGAGSFDND CCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ARVAPQRPEGATPRPVTAPDAMGRDEAAARAAESSPTESTRDAPRTPGAPAAESRLSTAG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHCC AGAAHSPMPDAAAAAEATAPHAATPPDAAPHDDGQTQAAPRPLDGGPQPPAAARHEAAPA CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC HAEIPNAPLAPAAPAWAAPQPPGMSFAEPAPAEPGDVPAAPDRAPAANPPPLGVAQFGAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCEE NLDFDLELPSGPSASLPAFTPEALAKIARNKLELASEYVELGDLAGARTLLHEVIEADHA CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DTRDEARVMLAKLADLS CCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA