| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is bcsB
Identifier: 53722604
GI number: 53722604
Start: 2151584
End: 2153980
Strand: Reverse
Name: bcsB
Synonym: BPSS1582
Alternate gene names: 53722604
Gene position: 2153980-2151584 (Counterclockwise)
Preceding gene: 53722608
Following gene: 53722603
Centisome position: 67.88
GC content: 72.42
Gene sequence:
>2397_bases ATGAAGCCGATTGCAACGTTTGCGCGCGCATTTGCAATGGCTTGCGCGCTCCTTTGTCCGATCGCGTCGTGGGCGGCGCT GCAGTCGGCACCTCGGCCGGCGTCTCAGCCCGCGCTTCAGCCCGCGTCCCGGCCGACGCCTGCGCCGGCGCTTCAGCCGC CGCGCGCGCGGCCTCGCGCTCCGCGCTCCGCCTCGCTCGCCGCCGGCGCGTCCGCGCCGCTCCCGGCGTCCGCGCCGCTC GTCATGCCGCTCGCCGCGCCGAAGCCGTCCGGCCTCGCCGGCGCGGCGATCCACGTGCCGTTCGCGACGCTCGGCGCATA CGAGCCGCTGCGCCTGCGCGGCAGCGACACCGCGCGCACCGTCAACGTCGGCGTGCGGCTCGACCGGATGGTCACGGCCG CGCGGCTGCGGCTCACGTATACGTATTCGCCGTCGCTCGTGTTTCCGGTGTCGCATCTGAAAGTGTCGATCAACGGCGAG GCGGTCGCGACGCTGCCGTTCGATAGCGAGCACGCGGGGCGCGCGGTGACGCAGGAGATCCCGCTCGATGCGCGCTATTT CACCGATTTCAACCAGATCGAGCTGCGCCTCATCGCGCACTACACGCTCGATCATTGCGAAGACCCGGAGCACTCGGCGC TTTGGGCCGACGTGAGCCCGACGAGCGAGCTGATCTTCGACGAGGCCTCGGTGCGGCTGCCGAACGATCTCGCGCTGCTG CCCGCGCCGTTCTTCGATCGCCGCGACAACAGCCGGCTGCGGCTGCCGTTCGTGCTGCCCGCGACGCCCGATGACGCGAC GCTGCGCAGCGCGGGCGTGCTCGCGTCGTGGTTCGGCGCGCTCGCCGATTACCGGCAGGCGCGCTTTCCGGTGTCGTCGG CGCTGCCCGCGAACGATCACGCGGTCGTCGTCGGCACGGCGGCTCGATTGCCGGCATCGCTCGCGCTGCCGCCGATCGAC GGGCCGATGCTCGTCGTCACCGACAATCCCGCCGCGCCCGACAAGAAGCTGCTGGTCGTCACGGGCCGCAGCGCGGCCGA CGTCGACGCCGCGACGAACGCGCTCGTGCTCGGCAACGCCGCGCTGTCCGGCCCGTGGGCGCGCGTGTCGCGCATCGACA TCGGCGCGCCGCGCAAGCCGTACGACGCGCCGCGCTGGGTGCCGGTGGACCGGCCGGTGGCGTTGCGCGAGCTCGTCGAC AGTCCGGCCGACCTGCAAGTGCGCGGCAGCGCGCCCGATCCGATCCGCCTGAACCTGCGCGTGCCGGCCGATCTGCATTC GTGGGGCGGCTCGGGCGTGCCGCTCGCGCTGCACTATCGCTACACCGCGCCCACCGTGCGCAGCGATTCGATGCTCGCCG TCGAGATCAACGATCAGCTCGTGCAGTCGTACCGGCTCTCGCCGCGCAGCCAGGACGCGCGCGGGCGCATGCAGTTGCCG CTGCTGTCCGGCGCGGACAGCCGCGCGACGAACGATGTCGACATTCCGGCGTTCCGCGTCGGCAGCGCGAACCAGCTGCA ACTGCGCTTCACGCTCGATTCGGAGAAGACCGGGCTTTGCACGGCAGTCGCGAGCGAGCCGCAGCGCGCGGCGATCGATC CCGATTCGACGATCGATTTCTCGCGCTTCATTCATTACGCGATGCTGCCGAACCTCGCGTATTTCGCGAACAGCGGCTTT CCGTTCACGCGCTACGCGGATCTTTCGCAGACCGCCGTCGTGCTGCCGCCGCGGCCGTCGCCCGCCGAGCAGGAAGCGTA TCTGACGATGCTCGGCCACATGGGGCAGTGGACGGGTTTTCCGGCGCTGCGCGTGCGGCTCGCGCGGGCGGCCGACGCGC CGGCGATCGCGGATAAGGATCTGCTCGTGATCGACGGCGCGCCGCCTTATGCGCAGCTCGCGAACTGGCGCGACGCGCTG CCCGTCGCGATCGGCGAGGCAACGGCCGGCGGCGGCTTCTCGCGCGCGGCGTTCTCGGTGAAGGAGCGCTGGCACGACGA CGCGCGCTCGCCGGCCGGCGGCGCGCGCTTCGAGCAGAGCGGCACGCTCGCCGCGCTGTTCGGCTTCGAGCGGCCCGGCG GCGACGGGCGCAGCGTCGTCGCGCTCACGGCCACCGACGCGCGGCATCTCGGCGATCTGCTCGACGTGTTCGAAAAGCCC GGCCTCGTCGCGCAACTGCAGGGCGACGTCGCGCTCGTGCGGGCGGGCGCGGTCGAGAGCCTGCGCGTCGGCGAGCCCTA TCTCGTCGGCTACGTGCCGTGGTACGCGCGCGTGTGGACGGCGGTCGCGAGGCATCCGATGCTGCTCGGGCTGCTCGGGG CGGCGGCCGGGCTGCTGCTCGCGCTCGGCGCGTTCGGCGCGTTGCAGCGGATCGCCGCGCGGCGGCGAGGGCTCTGA
Upstream 100 bases:
>100_bases TAACAGGCCAGATGTTTTGCGGGGAAAAAACGGACATCGACGCGCGGCCGTGCCGGCCGCGCGAAAGCGAAGCCGGTTGC GCATCGGTTTCGCGGCGCCG
Downstream 100 bases:
>100_bases CGCGATGGCGCGGCAAGCGGGGCGAGACGAAGGCGTCGGGCGCATCGGGCGTGAAGCGGGCGACGCGCGCGAGGCGGCCG GGGCGGGCGAGGCGTGCGGG
Product: cellulose synthase regulator protein
Products: NA
Alternate protein names: Cellulose synthase regulatory subunit [H]
Number of amino acids: Translated: 798; Mature: 798
Protein sequence:
>798_residues MKPIATFARAFAMACALLCPIASWAALQSAPRPASQPALQPASRPTPAPALQPPRARPRAPRSASLAAGASAPLPASAPL VMPLAAPKPSGLAGAAIHVPFATLGAYEPLRLRGSDTARTVNVGVRLDRMVTAARLRLTYTYSPSLVFPVSHLKVSINGE AVATLPFDSEHAGRAVTQEIPLDARYFTDFNQIELRLIAHYTLDHCEDPEHSALWADVSPTSELIFDEASVRLPNDLALL PAPFFDRRDNSRLRLPFVLPATPDDATLRSAGVLASWFGALADYRQARFPVSSALPANDHAVVVGTAARLPASLALPPID GPMLVVTDNPAAPDKKLLVVTGRSAADVDAATNALVLGNAALSGPWARVSRIDIGAPRKPYDAPRWVPVDRPVALRELVD SPADLQVRGSAPDPIRLNLRVPADLHSWGGSGVPLALHYRYTAPTVRSDSMLAVEINDQLVQSYRLSPRSQDARGRMQLP LLSGADSRATNDVDIPAFRVGSANQLQLRFTLDSEKTGLCTAVASEPQRAAIDPDSTIDFSRFIHYAMLPNLAYFANSGF PFTRYADLSQTAVVLPPRPSPAEQEAYLTMLGHMGQWTGFPALRVRLARAADAPAIADKDLLVIDGAPPYAQLANWRDAL PVAIGEATAGGGFSRAAFSVKERWHDDARSPAGGARFEQSGTLAALFGFERPGGDGRSVVALTATDARHLGDLLDVFEKP GLVAQLQGDVALVRAGAVESLRVGEPYLVGYVPWYARVWTAVARHPMLLGLLGAAAGLLLALGAFGALQRIAARRRGL
Sequences:
>Translated_798_residues MKPIATFARAFAMACALLCPIASWAALQSAPRPASQPALQPASRPTPAPALQPPRARPRAPRSASLAAGASAPLPASAPL VMPLAAPKPSGLAGAAIHVPFATLGAYEPLRLRGSDTARTVNVGVRLDRMVTAARLRLTYTYSPSLVFPVSHLKVSINGE AVATLPFDSEHAGRAVTQEIPLDARYFTDFNQIELRLIAHYTLDHCEDPEHSALWADVSPTSELIFDEASVRLPNDLALL PAPFFDRRDNSRLRLPFVLPATPDDATLRSAGVLASWFGALADYRQARFPVSSALPANDHAVVVGTAARLPASLALPPID GPMLVVTDNPAAPDKKLLVVTGRSAADVDAATNALVLGNAALSGPWARVSRIDIGAPRKPYDAPRWVPVDRPVALRELVD SPADLQVRGSAPDPIRLNLRVPADLHSWGGSGVPLALHYRYTAPTVRSDSMLAVEINDQLVQSYRLSPRSQDARGRMQLP LLSGADSRATNDVDIPAFRVGSANQLQLRFTLDSEKTGLCTAVASEPQRAAIDPDSTIDFSRFIHYAMLPNLAYFANSGF PFTRYADLSQTAVVLPPRPSPAEQEAYLTMLGHMGQWTGFPALRVRLARAADAPAIADKDLLVIDGAPPYAQLANWRDAL PVAIGEATAGGGFSRAAFSVKERWHDDARSPAGGARFEQSGTLAALFGFERPGGDGRSVVALTATDARHLGDLLDVFEKP GLVAQLQGDVALVRAGAVESLRVGEPYLVGYVPWYARVWTAVARHPMLLGLLGAAAGLLLALGAFGALQRIAARRRGL >Mature_798_residues MKPIATFARAFAMACALLCPIASWAALQSAPRPASQPALQPASRPTPAPALQPPRARPRAPRSASLAAGASAPLPASAPL VMPLAAPKPSGLAGAAIHVPFATLGAYEPLRLRGSDTARTVNVGVRLDRMVTAARLRLTYTYSPSLVFPVSHLKVSINGE AVATLPFDSEHAGRAVTQEIPLDARYFTDFNQIELRLIAHYTLDHCEDPEHSALWADVSPTSELIFDEASVRLPNDLALL PAPFFDRRDNSRLRLPFVLPATPDDATLRSAGVLASWFGALADYRQARFPVSSALPANDHAVVVGTAARLPASLALPPID GPMLVVTDNPAAPDKKLLVVTGRSAADVDAATNALVLGNAALSGPWARVSRIDIGAPRKPYDAPRWVPVDRPVALRELVD SPADLQVRGSAPDPIRLNLRVPADLHSWGGSGVPLALHYRYTAPTVRSDSMLAVEINDQLVQSYRLSPRSQDARGRMQLP LLSGADSRATNDVDIPAFRVGSANQLQLRFTLDSEKTGLCTAVASEPQRAAIDPDSTIDFSRFIHYAMLPNLAYFANSGF PFTRYADLSQTAVVLPPRPSPAEQEAYLTMLGHMGQWTGFPALRVRLARAADAPAIADKDLLVIDGAPPYAQLANWRDAL PVAIGEATAGGGFSRAAFSVKERWHDDARSPAGGARFEQSGTLAALFGFERPGGDGRSVVALTATDARHLGDLLDVFEKP GLVAQLQGDVALVRAGAVESLRVGEPYLVGYVPWYARVWTAVARHPMLLGLLGAAAGLLLALGAFGALQRIAARRRGL
Specific function: Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AcsB/BcsB family [H]
Homologues:
Organism=Escherichia coli, GI1789952, Length=778, Percent_Identity=33.9331619537275, Blast_Score=422, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003920 - InterPro: IPR018513 [H]
Pfam domain/function: PF03170 BcsB [H]
EC number: NA
Molecular weight: Translated: 85034; Mature: 85034
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIATFARAFAMACALLCPIASWAALQSAPRPASQPALQPASRPTPAPALQPPRARPRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRSASLAAGASAPLPASAPLVMPLAAPKPSGLAGAAIHVPFATLGAYEPLRLRGSDTART CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCHHHHCCCCCEEECCCCCCEE VNVGVRLDRMVTAARLRLTYTYSPSLVFPVSHLKVSINGEAVATLPFDSEHAGRAVTQEI EEECEEEHHHEEEEEEEEEEEECCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCHHHCC PLDARYFTDFNQIELRLIAHYTLDHCEDPEHSALWADVSPTSELIFDEASVRLPNDLALL CCCCCEECCCCCEEEEEEEEEHHHCCCCCCCCEEEECCCCCHHHEECCCCCCCCCCCEEC PAPFFDRRDNSRLRLPFVLPATPDDATLRSAGVLASWFGALADYRQARFPVSSALPANDH CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC AVVVGTAARLPASLALPPIDGPMLVVTDNPAAPDKKLLVVTGRSAADVDAATNALVLGNA EEEEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHCCCEEEEECC ALSGPWARVSRIDIGAPRKPYDAPRWVPVDRPVALRELVDSPADLQVRGSAPDPIRLNLR CCCCCCCEEEEEECCCCCCCCCCCCEECCCCCHHHHHHHCCCCCEEEECCCCCCEEEEEE VPADLHSWGGSGVPLALHYRYTAPTVRSDSMLAVEINDQLVQSYRLSPRSQDARGRMQLP CCCHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCEEEE LLSGADSRATNDVDIPAFRVGSANQLQLRFTLDSEKTGLCTAVASEPQRAAIDPDSTIDF EECCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCH SRFIHYAMLPNLAYFANSGFPFTRYADLSQTAVVLPPRPSPAEQEAYLTMLGHMGQWTGF HHHHHHHHHCCHHHHHCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCC PALRVRLARAADAPAIADKDLLVIDGAPPYAQLANWRDALPVAIGEATAGGGFSRAAFSV HHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCEEECCCCCCCCHHHHHHHH KERWHDDARSPAGGARFEQSGTLAALFGFERPGGDGRSVVALTATDARHLGDLLDVFEKP HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC GLVAQLQGDVALVRAGAVESLRVGEPYLVGYVPWYARVWTAVARHPMLLGLLGAAAGLLL CEEEEECCCEEEEECCCCCEEECCCCEEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHHH ALGAFGALQRIAARRRGL HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKPIATFARAFAMACALLCPIASWAALQSAPRPASQPALQPASRPTPAPALQPPRARPRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRSASLAAGASAPLPASAPLVMPLAAPKPSGLAGAAIHVPFATLGAYEPLRLRGSDTART CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCHHHHCCCCCEEECCCCCCEE VNVGVRLDRMVTAARLRLTYTYSPSLVFPVSHLKVSINGEAVATLPFDSEHAGRAVTQEI EEECEEEHHHEEEEEEEEEEEECCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCHHHCC PLDARYFTDFNQIELRLIAHYTLDHCEDPEHSALWADVSPTSELIFDEASVRLPNDLALL CCCCCEECCCCCEEEEEEEEEHHHCCCCCCCCEEEECCCCCHHHEECCCCCCCCCCCEEC PAPFFDRRDNSRLRLPFVLPATPDDATLRSAGVLASWFGALADYRQARFPVSSALPANDH CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC AVVVGTAARLPASLALPPIDGPMLVVTDNPAAPDKKLLVVTGRSAADVDAATNALVLGNA EEEEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHCCCEEEEECC ALSGPWARVSRIDIGAPRKPYDAPRWVPVDRPVALRELVDSPADLQVRGSAPDPIRLNLR CCCCCCCEEEEEECCCCCCCCCCCCEECCCCCHHHHHHHCCCCCEEEECCCCCCEEEEEE VPADLHSWGGSGVPLALHYRYTAPTVRSDSMLAVEINDQLVQSYRLSPRSQDARGRMQLP CCCHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCEEEE LLSGADSRATNDVDIPAFRVGSANQLQLRFTLDSEKTGLCTAVASEPQRAAIDPDSTIDF EECCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCH SRFIHYAMLPNLAYFANSGFPFTRYADLSQTAVVLPPRPSPAEQEAYLTMLGHMGQWTGF HHHHHHHHHCCHHHHHCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCC PALRVRLARAADAPAIADKDLLVIDGAPPYAQLANWRDALPVAIGEATAGGGFSRAAFSV HHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCEEECCCCCCCCHHHHHHHH KERWHDDARSPAGGARFEQSGTLAALFGFERPGGDGRSVVALTATDARHLGDLLDVFEKP HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC GLVAQLQGDVALVRAGAVESLRVGEPYLVGYVPWYARVWTAVARHPMLLGLLGAAAGLLL CEEEEECCCEEEEECCCCCEEECCCCEEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHHH ALGAFGALQRIAARRRGL HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]