| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is bcsZ
Identifier: 53722603
GI number: 53722603
Start: 2150059
End: 2151579
Strand: Reverse
Name: bcsZ
Synonym: BPSS1581
Alternate gene names: 53722603
Gene position: 2151579-2150059 (Counterclockwise)
Preceding gene: 53722604
Following gene: 53722602
Centisome position: 67.81
GC content: 76.46
Gene sequence:
>1521_bases ATGGCGCGGCAAGCGGGGCGAGACGAAGGCGTCGGGCGCATCGGGCGTGAAGCGGGCGACGCGCGCGAGGCGGCCGGGGC GGGCGAGGCGTGCGGGAGGCGCCACGCGCGGGCCGACGCGTGGGCGCGGCGGGCGTCGCGAGCATCGCGCGGGTGGCGCA CGTTTTGGCGCGGGCGCGGGGGCGTGCGCGCCGTCGTGGCGAGCGTCGTGGCGAGCTTCTCGGTGATGGCGTTCGCGGCG GCGACGTTGCCGGTGTCGTGGCGCGTCGCCGCGGCGGCGGAGCGTACGCGAAGCGGCGGCGAACGCGCGGGCGGGCTGCG CGACACGGCGGGCTTGATCGAGATCTCGGCGGCGGCGCCGGCCTCGACGCCGATCCCGGCGGCGCCGCGGCGGTTCGTGC AGCCGTTCGCGCAGCCGGCTCGCGCGTTCGCCGCCGCGAGCGCCTGCGCGCCGTCCTGGCCGCGCTGGGACCGTTTCAAG CGTGACTTCGTATCGGCCGACGGCCGCGTGATCGACGTCGGCTCGGCCGACGAGCGGACCGTATCCGAGGGGCAGGCGTA CGGCCTTTTCTTCGCGCTCGTCGCGAACGACCGCGCGGCGTTCGACGCGCTGCTGCGCTGGACCGAGGACAATCTCGCGC AGGGCGATCTGAGCGCGCGTCTGCCCGCGTGGCTGTGGGGCCGCGCGGCCGACGGCGCGTGGCGCGTGCTCGATGCGAAC GCCGCGTCCGACGCCGATCTGTGGCTTGCGTACGCGCTGCTCGAAGCGGGGCGCTTGTGGCGCGAGCGCAGCTACACGGC GCGCGGCGCGTTGCTCGCGAAGCGCGTGCTCGACGAGGAGACCGCGACGCTGCCGGGGCTCGGTCTCGTGCTGCTGCCGG GCCCGACGGGTTTTCGGCCGGCGCGCGACGCGTGGCGGCTGAATCCGAGCTATTCGCCGCCGCAGGCGATTCGCGGGATC GGCGCGCATGTGCCCGACGACGCGCGCTGGGCGCGGCTCGCGGCGGGCGTCGGCCGCGTGCTGACCGACAGCGCGCCGCG CGGCTTCGCGCCGGACTGGGCGCTGTATCGCGCGGGCCGCGGCTTCGAGCCGGACGCCGAAACGCATGCGGCGAGCGCGT ACAACGCGATTCGCGTCTATCTGTGGGCGGGCATGCTCGATGCGGGCGATCCGTTGGCGCGGCCGCTCGTCGCGCATTTC GCGCCGTTCGCCGAGCATGTCGCCGCGCATGGCGCGCCGCCGGAGGCGGTCGATGCGACGACGGGCGCGGCCGCCCCGCG CGACGGCAATGCCGGGTTTTCCGCGGCGGCCGTGCCGTTTCTCGAGGCGCGCGGCGAGCGGGCGAGCGCCGACGCGCAGC TCGCGCGCGTCGCGCGGCTCGAGCGCGAGACGGCGAGCGGCTATTACGCGAACGTGCTGACGCTGTTCGGGCTCGGCTGG CGCGACGGGCGCTACCGGTTCGCGGCCGACGGCACGCTGCGGGTGCGATGGAGCGAGCCGTGCTCGACGCCCGCGCGTTG A
Upstream 100 bases:
>100_bases CTGCTCGGGCTGCTCGGGGCGGCGGCCGGGCTGCTGCTCGCGCTCGGCGCGTTCGGCGCGTTGCAGCGGATCGCCGCGCG GCGGCGAGGGCTCTGACGCG
Downstream 100 bases:
>100_bases CGGCGGGGCCGCAGACGAGGCGGCGCGCGCGGCGCGGCGCGGGCTGCGCCGGGATCGCGGCCGTCGCGGCGATCGCGTTC GCCGTGCCATGCTTCGCGTC
Product: endo-1,4-D-glucanase
Products: NA
Alternate protein names: Carboxymethylcellulase; CMCase; Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MARQAGRDEGVGRIGREAGDAREAAGAGEACGRRHARADAWARRASRASRGWRTFWRGRGGVRAVVASVVASFSVMAFAA ATLPVSWRVAAAAERTRSGGERAGGLRDTAGLIEISAAAPASTPIPAAPRRFVQPFAQPARAFAAASACAPSWPRWDRFK RDFVSADGRVIDVGSADERTVSEGQAYGLFFALVANDRAAFDALLRWTEDNLAQGDLSARLPAWLWGRAADGAWRVLDAN AASDADLWLAYALLEAGRLWRERSYTARGALLAKRVLDEETATLPGLGLVLLPGPTGFRPARDAWRLNPSYSPPQAIRGI GAHVPDDARWARLAAGVGRVLTDSAPRGFAPDWALYRAGRGFEPDAETHAASAYNAIRVYLWAGMLDAGDPLARPLVAHF APFAEHVAAHGAPPEAVDATTGAAAPRDGNAGFSAAAVPFLEARGERASADAQLARVARLERETASGYYANVLTLFGLGW RDGRYRFAADGTLRVRWSEPCSTPAR
Sequences:
>Translated_506_residues MARQAGRDEGVGRIGREAGDAREAAGAGEACGRRHARADAWARRASRASRGWRTFWRGRGGVRAVVASVVASFSVMAFAA ATLPVSWRVAAAAERTRSGGERAGGLRDTAGLIEISAAAPASTPIPAAPRRFVQPFAQPARAFAAASACAPSWPRWDRFK RDFVSADGRVIDVGSADERTVSEGQAYGLFFALVANDRAAFDALLRWTEDNLAQGDLSARLPAWLWGRAADGAWRVLDAN AASDADLWLAYALLEAGRLWRERSYTARGALLAKRVLDEETATLPGLGLVLLPGPTGFRPARDAWRLNPSYSPPQAIRGI GAHVPDDARWARLAAGVGRVLTDSAPRGFAPDWALYRAGRGFEPDAETHAASAYNAIRVYLWAGMLDAGDPLARPLVAHF APFAEHVAAHGAPPEAVDATTGAAAPRDGNAGFSAAAVPFLEARGERASADAQLARVARLERETASGYYANVLTLFGLGW RDGRYRFAADGTLRVRWSEPCSTPAR >Mature_505_residues ARQAGRDEGVGRIGREAGDAREAAGAGEACGRRHARADAWARRASRASRGWRTFWRGRGGVRAVVASVVASFSVMAFAAA TLPVSWRVAAAAERTRSGGERAGGLRDTAGLIEISAAAPASTPIPAAPRRFVQPFAQPARAFAAASACAPSWPRWDRFKR DFVSADGRVIDVGSADERTVSEGQAYGLFFALVANDRAAFDALLRWTEDNLAQGDLSARLPAWLWGRAADGAWRVLDANA ASDADLWLAYALLEAGRLWRERSYTARGALLAKRVLDEETATLPGLGLVLLPGPTGFRPARDAWRLNPSYSPPQAIRGIG AHVPDDARWARLAAGVGRVLTDSAPRGFAPDWALYRAGRGFEPDAETHAASAYNAIRVYLWAGMLDAGDPLARPLVAHFA PFAEHVAAHGAPPEAVDATTGAAAPRDGNAGFSAAAVPFLEARGERASADAQLARVARLERETASGYYANVLTLFGLGWR DGRYRFAADGTLRVRWSEPCSTPAR
Specific function: Hydrolyzes carboxymethylcellulose [H]
COG id: COG3405
COG function: function code G; Endoglucanase Y
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 8 (cellulase D) family [H]
Homologues:
Organism=Escherichia coli, GI1789951, Length=365, Percent_Identity=47.3972602739726, Blast_Score=333, Evalue=2e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR002037 - InterPro: IPR019834 [H]
Pfam domain/function: PF01270 Glyco_hydro_8 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 53962; Mature: 53831
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQAGRDEGVGRIGREAGDAREAAGAGEACGRRHARADAWARRASRASRGWRTFWRGRG CCCCCCCCCCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GVRAVVASVVASFSVMAFAAATLPVSWRVAAAAERTRSGGERAGGLRDTAGLIEISAAAP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEECCCC ASTPIPAAPRRFVQPFAQPARAFAAASACAPSWPRWDRFKRDFVSADGRVIDVGSADERT CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCHH VSEGQAYGLFFALVANDRAAFDALLRWTEDNLAQGDLSARLPAWLWGRAADGAWRVLDAN HHCCCHHEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHCCCHHHCCCCCCCCEEEEECC AASDADLWLAYALLEAGRLWRERSYTARGALLAKRVLDEETATLPGLGLVLLPGPTGFRP CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC ARDAWRLNPSYSPPQAIRGIGAHVPDDARWARLAAGVGRVLTDSAPRGFAPDWALYRAGR CCHHEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC GFEPDAETHAASAYNAIRVYLWAGMLDAGDPLARPLVAHFAPFAEHVAAHGAPPEAVDAT CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC TGAAAPRDGNAGFSAAAVPFLEARGERASADAQLARVARLERETASGYYANVLTLFGLGW CCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC RDGRYRFAADGTLRVRWSEPCSTPAR CCCCEEEECCCEEEEEECCCCCCCCC >Mature Secondary Structure ARQAGRDEGVGRIGREAGDAREAAGAGEACGRRHARADAWARRASRASRGWRTFWRGRG CCCCCCCCCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GVRAVVASVVASFSVMAFAAATLPVSWRVAAAAERTRSGGERAGGLRDTAGLIEISAAAP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEECCCC ASTPIPAAPRRFVQPFAQPARAFAAASACAPSWPRWDRFKRDFVSADGRVIDVGSADERT CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCHH VSEGQAYGLFFALVANDRAAFDALLRWTEDNLAQGDLSARLPAWLWGRAADGAWRVLDAN HHCCCHHEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHCCCHHHCCCCCCCCEEEEECC AASDADLWLAYALLEAGRLWRERSYTARGALLAKRVLDEETATLPGLGLVLLPGPTGFRP CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC ARDAWRLNPSYSPPQAIRGIGAHVPDDARWARLAAGVGRVLTDSAPRGFAPDWALYRAGR CCHHEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC GFEPDAETHAASAYNAIRVYLWAGMLDAGDPLARPLVAHFAPFAEHVAAHGAPPEAVDAT CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC TGAAAPRDGNAGFSAAAVPFLEARGERASADAQLARVARLERETASGYYANVLTLFGLGW CCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC RDGRYRFAADGTLRVRWSEPCSTPAR CCCCEEEECCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]