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The map label for this gene is bsaO

Identifier: 53722566

GI number: 53722566

Start: 2098689

End: 2100551

Strand: Reverse

Name: bsaO

Synonym: BPSS1545

Alternate gene names: 53722566

Gene position: 2100551-2098689 (Counterclockwise)

Preceding gene: 53722567

Following gene: 53722565

Centisome position: 66.2

GC content: 70.26

Gene sequence:

>1863_bases
ATGATGTATGCCGACACGGCCAGACGATACGCAGCCGCGCTTGCCGCGTCGCTGCTGATGACGGGCGCGGCGTTCGCCGC
GCCGACCGACGCGGCGCCGCTCGCCGACGCGCCCGCGGCGGCGAGCGCGACGCCCGACGCGCGGGACGGCGACGCGTCGC
GCGTGGCCGCGCCGCAGGACGACGAGCGCCACTTCGTCGCGAACGACGCGAGCATCAGCGTGCTGCTCAATGCGCTGTCG
GGCCGGCTGCACAAGCCGATCGTCGCGAGCGAGAAGGTGCGCCGCAAGCACGTGACGGGCGAGTTCGACCTCGCGCAGCC
CCGCGCGCTGCTCGCGCGGCTCGGCGAATCGATGTCGCTGCTCTGGTACGACGACGGCGCGTCGATCTACATCTACGACA
ACTCGGAGATCAAGAACGCGGTCGTCTCGATGCGCCATGCGACGGTGCGCAACCTGCGCGATTTCATCCGGCAGACGCGG
CTCTACGATCCGCGCTTTCCGGTGCGCGGCGACGACCTGAGCAACACGTTCTACGTGACGGGCGCGCCCGTCTACGTGAA
TCTCGTCGCCGCCGCCGCGCGCTATCTCGACGAGGTGCGCTCGAACGAGGCGAGCGACCGGCAGGTCGTGCGCGTCGTGC
AGCTTCACAACAGCTTCGTCGTCGACCGCCAGTACACGCTGCGCGACAAGGAAGTCGACATCCCGGGCATGGCGACCGTG
CTCGGCCGCATCTTCGGCCCGGCGCGGCCGGGCGCGCCGGCGGACTCGCCCGTCGCGGCGGCCGACGCCACGGCGCGCGG
CGGCGCGGGCGGCGCGGCGGGCAAGCCGGCGTTCTCGCTTGCCGATGCGTTGCCCGCGCCGCTCGACGCCGGCAACGCGC
CGGGCGGCGCGGGCTCGACGCATTCGACAAACCCGGCGAACGCCGCGAGCCCGATGGGCGGCGCGGCGGGCGGCGTCGCG
CTGCCCGCGTCGGACGGCGTGCGCGCGGTGGCGTATCCGGACACGAACAGCGTGATCCTCGTCGGCCGGCTCGACAAGGT
GCAGGACATGGAGGCGCTGATCCGCTCGCTCGATGTCGAGAAGCGGCAGATCGAGCTGTCGCTGTGGATCATCGACATCC
GCAAGAGCCGGCTCGATCAGCTCGGCATCGACTGGCAGGGTGCGCTCAATGCGCCGGGCATCGGCGTCGGCTTCAACAAT
CGCGGCGGCAACGTGACGACGCTCGACGGCACCAGGTTCCTCGCATCGGTCGCGGCGCTCAGCCAGACGGGCGACGCCAC
CGTGATCTCGCGGCCGATCGTGCTCACGCAGGAGAACGTGCCGGCGACGTTCGACAGCAACCAGACGTTCTACGCAAAGC
TGATCGGCGAGCGCACGGTGCAGCTCGATCACGTGACCTACGGCACGCTCGTCAACGTGCTGCCGCGGCTCACGCGCGAT
GGGTCGCAGGTCGAGATGATCGTCGACATCGAGGACGGCAACACCGACGGCGCGACGAGCGACGGCCAGATCGTCATCGA
CAACAACACGATGCCGCTCGTGAACCGCACCGAGATCAACACGGTCGCGCGCGTGCCGCACGAGATGAGCCTGCTCATCG
GCGGCAACACGCGCGACGACGTCACGCGCCGCACGTTCCGGATTCCCGGGCTGGCCAGCATTCCGCTGATCGGCGGGCTG
TTTCGCGGGCATTCGGATCGGCACGAGCAGGTGGTGCGCGTGTTCCTGATCCAGCCGAAGCTGCTGCGCGCGGGCGCGGC
CTGGCCCGACGGCCAGCCGTGGGAATCGGGCGATCCGGCGGACAACGCGACGCTGCGCGCGACCGTGCAGATGCTCAAAC
CCTACATGGACGACAAGTCATGA

Upstream 100 bases:

>100_bases
AACGGCTTCGCGTCTTCGTCCCACTTCTCGCGGGAAATCAAGGACTTGTTCGGCATTTCGCCGTGCCGGTTCCGTCGCCG
GACATGAGGAGCCCCAACCG

Downstream 100 bases:

>100_bases
GCTCGATCATCGGCGGCGCGTCGGCCGCGCGGCGCGGCTTTTCGATCGACGGCACGGGGAGCGCGGCGAACCGGCTCGAC
GCGGAGCCGTCGCTCGACGA

Product: Type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MMYADTARRYAAALAASLLMTGAAFAAPTDAAPLADAPAAASATPDARDGDASRVAAPQDDERHFVANDASISVLLNALS
GRLHKPIVASEKVRRKHVTGEFDLAQPRALLARLGESMSLLWYDDGASIYIYDNSEIKNAVVSMRHATVRNLRDFIRQTR
LYDPRFPVRGDDLSNTFYVTGAPVYVNLVAAAARYLDEVRSNEASDRQVVRVVQLHNSFVVDRQYTLRDKEVDIPGMATV
LGRIFGPARPGAPADSPVAAADATARGGAGGAAGKPAFSLADALPAPLDAGNAPGGAGSTHSTNPANAASPMGGAAGGVA
LPASDGVRAVAYPDTNSVILVGRLDKVQDMEALIRSLDVEKRQIELSLWIIDIRKSRLDQLGIDWQGALNAPGIGVGFNN
RGGNVTTLDGTRFLASVAALSQTGDATVISRPIVLTQENVPATFDSNQTFYAKLIGERTVQLDHVTYGTLVNVLPRLTRD
GSQVEMIVDIEDGNTDGATSDGQIVIDNNTMPLVNRTEINTVARVPHEMSLLIGGNTRDDVTRRTFRIPGLASIPLIGGL
FRGHSDRHEQVVRVFLIQPKLLRAGAAWPDGQPWESGDPADNATLRATVQMLKPYMDDKS

Sequences:

>Translated_620_residues
MMYADTARRYAAALAASLLMTGAAFAAPTDAAPLADAPAAASATPDARDGDASRVAAPQDDERHFVANDASISVLLNALS
GRLHKPIVASEKVRRKHVTGEFDLAQPRALLARLGESMSLLWYDDGASIYIYDNSEIKNAVVSMRHATVRNLRDFIRQTR
LYDPRFPVRGDDLSNTFYVTGAPVYVNLVAAAARYLDEVRSNEASDRQVVRVVQLHNSFVVDRQYTLRDKEVDIPGMATV
LGRIFGPARPGAPADSPVAAADATARGGAGGAAGKPAFSLADALPAPLDAGNAPGGAGSTHSTNPANAASPMGGAAGGVA
LPASDGVRAVAYPDTNSVILVGRLDKVQDMEALIRSLDVEKRQIELSLWIIDIRKSRLDQLGIDWQGALNAPGIGVGFNN
RGGNVTTLDGTRFLASVAALSQTGDATVISRPIVLTQENVPATFDSNQTFYAKLIGERTVQLDHVTYGTLVNVLPRLTRD
GSQVEMIVDIEDGNTDGATSDGQIVIDNNTMPLVNRTEINTVARVPHEMSLLIGGNTRDDVTRRTFRIPGLASIPLIGGL
FRGHSDRHEQVVRVFLIQPKLLRAGAAWPDGQPWESGDPADNATLRATVQMLKPYMDDKS
>Mature_620_residues
MMYADTARRYAAALAASLLMTGAAFAAPTDAAPLADAPAAASATPDARDGDASRVAAPQDDERHFVANDASISVLLNALS
GRLHKPIVASEKVRRKHVTGEFDLAQPRALLARLGESMSLLWYDDGASIYIYDNSEIKNAVVSMRHATVRNLRDFIRQTR
LYDPRFPVRGDDLSNTFYVTGAPVYVNLVAAAARYLDEVRSNEASDRQVVRVVQLHNSFVVDRQYTLRDKEVDIPGMATV
LGRIFGPARPGAPADSPVAAADATARGGAGGAAGKPAFSLADALPAPLDAGNAPGGAGSTHSTNPANAASPMGGAAGGVA
LPASDGVRAVAYPDTNSVILVGRLDKVQDMEALIRSLDVEKRQIELSLWIIDIRKSRLDQLGIDWQGALNAPGIGVGFNN
RGGNVTTLDGTRFLASVAALSQTGDATVISRPIVLTQENVPATFDSNQTFYAKLIGERTVQLDHVTYGTLVNVLPRLTRD
GSQVEMIVDIEDGNTDGATSDGQIVIDNNTMPLVNRTEINTVARVPHEMSLLIGGNTRDDVTRRTFRIPGLASIPLIGGL
FRGHSDRHEQVVRVFLIQPKLLRAGAAWPDGQPWESGDPADNATLRATVQMLKPYMDDKS

Specific function: Involved in the invasion of the cells of the intestinal epithelium. Could be necessary for the export of invasion related determinants [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR004845
- InterPro:   IPR003522 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 66137; Mature: 66137

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMYADTARRYAAALAASLLMTGAAFAAPTDAAPLADAPAAASATPDARDGDASRVAAPQD
CCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DERHFVANDASISVLLNALSGRLHKPIVASEKVRRKHVTGEFDLAQPRALLARLGESMSL
CCCEEEECCCHHHHHHHHHHCHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEE
LWYDDGASIYIYDNSEIKNAVVSMRHATVRNLRDFIRQTRLYDPRFPVRGDDLSNTFYVT
EEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
GAPVYVNLVAAAARYLDEVRSNEASDRQVVRVVQLHNSFVVDRQYTLRDKEVDIPGMATV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCEEECCCCCCCCCHHHHH
LGRIFGPARPGAPADSPVAAADATARGGAGGAAGKPAFSLADALPAPLDAGNAPGGAGST
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
HSTNPANAASPMGGAAGGVALPASDGVRAVAYPDTNSVILVGRLDKVQDMEALIRSLDVE
CCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCC
KRQIELSLWIIDIRKSRLDQLGIDWQGALNAPGIGVGFNNRGGNVTTLDGTRFLASVAAL
CEEEEEEEEEEEECHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEECHHHHHHHHHHH
SQTGDATVISRPIVLTQENVPATFDSNQTFYAKLIGERTVQLDHVTYGTLVNVLPRLTRD
HCCCCCEEEECCEEEECCCCCCEECCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCC
GSQVEMIVDIEDGNTDGATSDGQIVIDNNTMPLVNRTEINTVARVPHEMSLLIGGNTRDD
CCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCEECCCCHHHHHCCCEEEEEECCCCCHH
VTRRTFRIPGLASIPLIGGLFRGHSDRHEQVVRVFLIQPKLLRAGAAWPDGQPWESGDPA
HHHHEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC
DNATLRATVQMLKPYMDDKS
CCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMYADTARRYAAALAASLLMTGAAFAAPTDAAPLADAPAAASATPDARDGDASRVAAPQD
CCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DERHFVANDASISVLLNALSGRLHKPIVASEKVRRKHVTGEFDLAQPRALLARLGESMSL
CCCEEEECCCHHHHHHHHHHCHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEE
LWYDDGASIYIYDNSEIKNAVVSMRHATVRNLRDFIRQTRLYDPRFPVRGDDLSNTFYVT
EEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
GAPVYVNLVAAAARYLDEVRSNEASDRQVVRVVQLHNSFVVDRQYTLRDKEVDIPGMATV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCEEECCCCCCCCCHHHHH
LGRIFGPARPGAPADSPVAAADATARGGAGGAAGKPAFSLADALPAPLDAGNAPGGAGST
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
HSTNPANAASPMGGAAGGVALPASDGVRAVAYPDTNSVILVGRLDKVQDMEALIRSLDVE
CCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCC
KRQIELSLWIIDIRKSRLDQLGIDWQGALNAPGIGVGFNNRGGNVTTLDGTRFLASVAAL
CEEEEEEEEEEEECHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEECHHHHHHHHHHH
SQTGDATVISRPIVLTQENVPATFDSNQTFYAKLIGERTVQLDHVTYGTLVNVLPRLTRD
HCCCCCEEEECCEEEECCCCCCEECCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCC
GSQVEMIVDIEDGNTDGATSDGQIVIDNNTMPLVNRTEINTVARVPHEMSLLIGGNTRDD
CCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCEECCCCHHHHHCCCEEEEEECCCCCHH
VTRRTFRIPGLASIPLIGGLFRGHSDRHEQVVRVFLIQPKLLRAGAAWPDGQPWESGDPA
HHHHEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC
DNATLRATVQMLKPYMDDKS
CCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7868245; 7997169; 11677609 [H]