Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

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The map label for this gene is bsaP

Identifier: 53722565

GI number: 53722565

Start: 2097586

End: 2098692

Strand: Reverse

Name: bsaP

Synonym: BPSS1544

Alternate gene names: 53722565

Gene position: 2098692-2097586 (Counterclockwise)

Preceding gene: 53722566

Following gene: 53722564

Centisome position: 66.14

GC content: 74.07

Gene sequence:

>1107_bases
ATGAGCTCGATCATCGGCGGCGCGTCGGCCGCGCGGCGCGGCTTTTCGATCGACGGCACGGGGAGCGCGGCGAACCGGCT
CGACGCGGAGCCGTCGCTCGACGACGCGCCGCAGACGGGGGCGGCGGGCGCGGCCGACGTGCAGGCGCAACTCGCCGGCG
TCGACGAGGAGGCCGCGAACGCCGCCGCGCAATTCGGCCGGTTCCGCGCGTCGGAGCGCAAGGGGCGGCGCAGCGACGAG
CTCGAACGGATTCTCGACACGGACGCCGACGAGAAGCTCGACGAGCTCGCCGCGCTGCTCGGCGGCCGCGCGGACCTCGC
GACGCTGCTGCGCGACGCGCGCGAGCGCTTTCGCGACGAGAGCGATCTGTTGCTCGCGCTGCGCGAGCTGCGCCGGCGGC
GCCGGCTCGACGGCGAATCCGTCGACGCGCTCGAGCGCGCGATCGACGAACTGCTCGCGGGCGACGGCGCCAAGCGGATC
AAGGCGGGCATCAACGCGGCGCTCAAGGCGAAGGTGTTCGGCGCGCGGATGCAACTCGATGCGCGCCGGCTGCGCGAGCT
GTACCGGCAGTTCCTCGAGTTCGACGGCTCGCACCTCGTCATCTACGAAGACTGGATCGAGCAGTTCGGTGCGAGCCGCC
GCAAGCGGATTCTCGACTACGTGAGCGCCGCGCTGTCGTACGACATGCAGTCGCACGATCCGAGCTGCGGGTGCGCGGCC
GAGTTCGGCCCGCTGCTCGGCACGCTGCATCGCGCGCGCATGCTCGCGTCGGCCGACGAGCAGTTCGTCGGCCGGCTGCT
CGACGACGCGCTCGCGCGCGATTGCGGGCTCACCGAGGCGCGCGCGCTCGCGACGATGCTGGGCGGCCTGCAACGGCCGT
TCTCGGTCGCCGACGTGCTGCTGGGCACGCTCGGCGATCTGCTCGAGCCGCTCGCGCCCGCCCGTCGCTCGCAGTTGTTG
CAGCTCGCGCTGCGCGCGTTCGCGGGCGTGCCGATCGCGCTCTACGGCGACGCCGACGCGCGCCGCGCGGCGCTCGGCGC
GCTCGAGGAGCTGATCGGCGCGACGTATGCGCGCGAGCGGCGGCAGGCGCGCCCGCGCGCCGACTGA

Upstream 100 bases:

>100_bases
CCTGGCCCGACGGCCAGCCGTGGGAATCGGGCGATCCGGCGGACAACGCGACGCTGCGCGCGACCGTGCAGATGCTCAAA
CCCTACATGGACGACAAGTC

Downstream 100 bases:

>100_bases
CGCGCGGCGCCTTTCATTCAATCCGGTCGATAGTCATGCTGAAGAATCTCCTGATCAAGGCCCAAGCGCGCCCCGAACTG
ATCGTCCTGTGCCTGATGGT

Product: Type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAANAAAQFGRFRASERKGRRSDE
LERILDTDADEKLDELAALLGGRADLATLLRDARERFRDESDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRI
KAGINAALKAKVFGARMQLDARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPSCGCAA
EFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVLLGTLGDLLEPLAPARRSQLL
QLALRAFAGVPIALYGDADARRAALGALEELIGATYARERRQARPRAD

Sequences:

>Translated_368_residues
MSSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAANAAAQFGRFRASERKGRRSDE
LERILDTDADEKLDELAALLGGRADLATLLRDARERFRDESDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRI
KAGINAALKAKVFGARMQLDARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPSCGCAA
EFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVLLGTLGDLLEPLAPARRSQLL
QLALRAFAGVPIALYGDADARRAALGALEELIGATYARERRQARPRAD
>Mature_367_residues
SSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAANAAAQFGRFRASERKGRRSDEL
ERILDTDADEKLDELAALLGGRADLATLLRDARERFRDESDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRIK
AGINAALKAKVFGARMQLDARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPSCGCAAE
FGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVLLGTLGDLLEPLAPARRSQLLQ
LALRAFAGVPIALYGDADARRAALGALEELIGATYARERRQARPRAD

Specific function: Necessary for the secretion of IPA invasins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Host cell (Probable). Note=Secreted via Mxi-Spa type III secretion system (TTSS), and delivered into the host cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010812
- InterPro:   IPR003520
- InterPro:   IPR013401 [H]

Pfam domain/function: PF07201 HrpJ [H]

EC number: NA

Molecular weight: Translated: 39902; Mature: 39770

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAAN
CCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH
AAAQFGRFRASERKGRRSDELERILDTDADEKLDELAALLGGRADLATLLRDARERFRDE
HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH
SDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRIKAGINAALKAKVFGARMQLD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPSCGCAA
HHHHHHHHHHHHHCCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
LGTLGDLLEPLAPARRSQLLQLALRAFAGVPIALYGDADARRAALGALEELIGATYARER
HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
RQARPRAD
HHCCCCCC
>Mature Secondary Structure 
SSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAAN
CCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH
AAAQFGRFRASERKGRRSDELERILDTDADEKLDELAALLGGRADLATLLRDARERFRDE
HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH
SDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRIKAGINAALKAKVFGARMQLD
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPSCGCAA
HHHHHHHHHHHHHCCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
LGTLGDLLEPLAPARRSQLLQLALRAFAGVPIALYGDADARRAALGALEELIGATYARER
HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
RQARPRAD
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11115111; 11292750; 12384590; 8437520; 1639496 [H]