| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
Click here to switch to the map view.
The map label for this gene is bsaP
Identifier: 53722565
GI number: 53722565
Start: 2097586
End: 2098692
Strand: Reverse
Name: bsaP
Synonym: BPSS1544
Alternate gene names: 53722565
Gene position: 2098692-2097586 (Counterclockwise)
Preceding gene: 53722566
Following gene: 53722564
Centisome position: 66.14
GC content: 74.07
Gene sequence:
>1107_bases ATGAGCTCGATCATCGGCGGCGCGTCGGCCGCGCGGCGCGGCTTTTCGATCGACGGCACGGGGAGCGCGGCGAACCGGCT CGACGCGGAGCCGTCGCTCGACGACGCGCCGCAGACGGGGGCGGCGGGCGCGGCCGACGTGCAGGCGCAACTCGCCGGCG TCGACGAGGAGGCCGCGAACGCCGCCGCGCAATTCGGCCGGTTCCGCGCGTCGGAGCGCAAGGGGCGGCGCAGCGACGAG CTCGAACGGATTCTCGACACGGACGCCGACGAGAAGCTCGACGAGCTCGCCGCGCTGCTCGGCGGCCGCGCGGACCTCGC GACGCTGCTGCGCGACGCGCGCGAGCGCTTTCGCGACGAGAGCGATCTGTTGCTCGCGCTGCGCGAGCTGCGCCGGCGGC GCCGGCTCGACGGCGAATCCGTCGACGCGCTCGAGCGCGCGATCGACGAACTGCTCGCGGGCGACGGCGCCAAGCGGATC AAGGCGGGCATCAACGCGGCGCTCAAGGCGAAGGTGTTCGGCGCGCGGATGCAACTCGATGCGCGCCGGCTGCGCGAGCT GTACCGGCAGTTCCTCGAGTTCGACGGCTCGCACCTCGTCATCTACGAAGACTGGATCGAGCAGTTCGGTGCGAGCCGCC GCAAGCGGATTCTCGACTACGTGAGCGCCGCGCTGTCGTACGACATGCAGTCGCACGATCCGAGCTGCGGGTGCGCGGCC GAGTTCGGCCCGCTGCTCGGCACGCTGCATCGCGCGCGCATGCTCGCGTCGGCCGACGAGCAGTTCGTCGGCCGGCTGCT CGACGACGCGCTCGCGCGCGATTGCGGGCTCACCGAGGCGCGCGCGCTCGCGACGATGCTGGGCGGCCTGCAACGGCCGT TCTCGGTCGCCGACGTGCTGCTGGGCACGCTCGGCGATCTGCTCGAGCCGCTCGCGCCCGCCCGTCGCTCGCAGTTGTTG CAGCTCGCGCTGCGCGCGTTCGCGGGCGTGCCGATCGCGCTCTACGGCGACGCCGACGCGCGCCGCGCGGCGCTCGGCGC GCTCGAGGAGCTGATCGGCGCGACGTATGCGCGCGAGCGGCGGCAGGCGCGCCCGCGCGCCGACTGA
Upstream 100 bases:
>100_bases CCTGGCCCGACGGCCAGCCGTGGGAATCGGGCGATCCGGCGGACAACGCGACGCTGCGCGCGACCGTGCAGATGCTCAAA CCCTACATGGACGACAAGTC
Downstream 100 bases:
>100_bases CGCGCGGCGCCTTTCATTCAATCCGGTCGATAGTCATGCTGAAGAATCTCCTGATCAAGGCCCAAGCGCGCCCCGAACTG ATCGTCCTGTGCCTGATGGT
Product: Type III secretion system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAANAAAQFGRFRASERKGRRSDE LERILDTDADEKLDELAALLGGRADLATLLRDARERFRDESDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRI KAGINAALKAKVFGARMQLDARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPSCGCAA EFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVLLGTLGDLLEPLAPARRSQLL QLALRAFAGVPIALYGDADARRAALGALEELIGATYARERRQARPRAD
Sequences:
>Translated_368_residues MSSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAANAAAQFGRFRASERKGRRSDE LERILDTDADEKLDELAALLGGRADLATLLRDARERFRDESDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRI KAGINAALKAKVFGARMQLDARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPSCGCAA EFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVLLGTLGDLLEPLAPARRSQLL QLALRAFAGVPIALYGDADARRAALGALEELIGATYARERRQARPRAD >Mature_367_residues SSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAANAAAQFGRFRASERKGRRSDEL ERILDTDADEKLDELAALLGGRADLATLLRDARERFRDESDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRIK AGINAALKAKVFGARMQLDARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPSCGCAAE FGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVLLGTLGDLLEPLAPARRSQLLQ LALRAFAGVPIALYGDADARRAALGALEELIGATYARERRQARPRAD
Specific function: Necessary for the secretion of IPA invasins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted. Host cell (Probable). Note=Secreted via Mxi-Spa type III secretion system (TTSS), and delivered into the host cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010812 - InterPro: IPR003520 - InterPro: IPR013401 [H]
Pfam domain/function: PF07201 HrpJ [H]
EC number: NA
Molecular weight: Translated: 39902; Mature: 39770
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAAN CCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH AAAQFGRFRASERKGRRSDELERILDTDADEKLDELAALLGGRADLATLLRDARERFRDE HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH SDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRIKAGINAALKAKVFGARMQLD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPSCGCAA HHHHHHHHHHHHHCCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH EFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH LGTLGDLLEPLAPARRSQLLQLALRAFAGVPIALYGDADARRAALGALEELIGATYARER HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH RQARPRAD HHCCCCCC >Mature Secondary Structure SSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAAN CCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH AAAQFGRFRASERKGRRSDELERILDTDADEKLDELAALLGGRADLATLLRDARERFRDE HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCH SDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRIKAGINAALKAKVFGARMQLD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPSCGCAA HHHHHHHHHHHHHCCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH EFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH LGTLGDLLEPLAPARRSQLLQLALRAFAGVPIALYGDADARRAALGALEELIGATYARER HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH RQARPRAD HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11115111; 11292750; 12384590; 8437520; 1639496 [H]