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The map label for this gene is glxA [H]

Identifier: 53722451

GI number: 53722451

Start: 1938234

End: 1939232

Strand: Reverse

Name: glxA [H]

Synonym: BPSS1424

Alternate gene names: 53722451

Gene position: 1939232-1938234 (Counterclockwise)

Preceding gene: 53722452

Following gene: 53722450

Centisome position: 61.12

GC content: 70.87

Gene sequence:

>999_bases
GTGACGTCCGCCGCCGCTGCCGCACCCGCCGCCTGCGCCGAGCCGGTTCCCTCGGTCGCGCATTTCGGGTTCCTGACGTT
GCCGAATTTCTCGATGATCGCGTTCACGAGCGCGGTCGAGGTGCTGCGCATGGCGAACTACGTCGCGCGCGCGGACCATT
ACCGCTGGTCGATCTTCTCGCTCGACGGCGCGCCCGTGCGCGCGAGCAACGGCATCGCGGTGCGGCCGACGCAGCCGCTC
GACGTCGACGATCCGCCGGACGTGGTGATCGTCTGCGGCGGCATCCGGATTCGCGAGGCGGTGGACGAGCGGGTGCGCGA
CGCGCTCGGCGCGCTCGCCGCGCGCGATGTGCCGCTCGGCGGCATCTGCACGGGCGCGTATGCGCTGATGGCGTGCGGGC
TGCTCGACGGCTACCGCTGCGCGGTGCACTGGGAGAACCTGTCCGCGCTGCACGCGGAGTTTCCGCGGGTGCGCTTCGCC
GACGAGCTGTTCGCCGTCGATCGCGACCGGCTCACCTGCACGGGCGGCACCGCGCCGCTCGACCTGATGCTGAACCTCGT
CGGCGCGCGGCTCGGGCAGCCGCTCGCCGCGCAGGTCTCCGAGCAGTTCATTCTCGAGCGCATCCGCGGCGCGACCGATC
CGCAGCCGATTCCGGTCGACGCGCGCGTCGGCTTCTCGCGCGCGGAGCTGATCGAGGTCGTGCGGCTGATGGAGGCGAAC
ATCGAGGAGCCGCTGTCGCTCGAGGAACTCGCGCGGCTCGTGCGGCTGTCGCAGCGGCACCTGCAGCGGATGTTCAAGAT
CTATCTGAACGTATCGCCCACGCACTACTACCTGACGCTGCGCCTGAAGCGCGCGCGCGACCTGCTGCGCACCACCGACG
CATCGATCGCGCGCGTGACGGCGGTCTGCGGCTTTCATTCGCCGTGCCATTTCAGCAAGGCGTACCGCGCGCAGTTCGGC
CATGCGCCGAGCCACGAGCGGCGCGTATCGGCGCGCTGA

Upstream 100 bases:

>100_bases
CGCCGGTTTTTTCGCCTTCCTCGTTTCGCCGATCCGGTCGTCTCCGGCGGGCTGTTCGCCGCCGGAGCGGCTTCGCGCAA
CCCGTTCGCTGGAGAACGAT

Downstream 100 bases:

>100_bases
ACGCATTGAAACAAGCGCGTGGCCGCCGGGGTCGCGGCGCGCGCGTCAGCCACGAACCGATCCCATGTTGACGACATCTT
TGATGATGAGGAGAAGCACG

Product: AraC transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MTSAAAAAPAACAEPVPSVAHFGFLTLPNFSMIAFTSAVEVLRMANYVARADHYRWSIFSLDGAPVRASNGIAVRPTQPL
DVDDPPDVVIVCGGIRIREAVDERVRDALGALAARDVPLGGICTGAYALMACGLLDGYRCAVHWENLSALHAEFPRVRFA
DELFAVDRDRLTCTGGTAPLDLMLNLVGARLGQPLAAQVSEQFILERIRGATDPQPIPVDARVGFSRAELIEVVRLMEAN
IEEPLSLEELARLVRLSQRHLQRMFKIYLNVSPTHYYLTLRLKRARDLLRTTDASIARVTAVCGFHSPCHFSKAYRAQFG
HAPSHERRVSAR

Sequences:

>Translated_332_residues
MTSAAAAAPAACAEPVPSVAHFGFLTLPNFSMIAFTSAVEVLRMANYVARADHYRWSIFSLDGAPVRASNGIAVRPTQPL
DVDDPPDVVIVCGGIRIREAVDERVRDALGALAARDVPLGGICTGAYALMACGLLDGYRCAVHWENLSALHAEFPRVRFA
DELFAVDRDRLTCTGGTAPLDLMLNLVGARLGQPLAAQVSEQFILERIRGATDPQPIPVDARVGFSRAELIEVVRLMEAN
IEEPLSLEELARLVRLSQRHLQRMFKIYLNVSPTHYYLTLRLKRARDLLRTTDASIARVTAVCGFHSPCHFSKAYRAQFG
HAPSHERRVSAR
>Mature_331_residues
TSAAAAAPAACAEPVPSVAHFGFLTLPNFSMIAFTSAVEVLRMANYVARADHYRWSIFSLDGAPVRASNGIAVRPTQPLD
VDDPPDVVIVCGGIRIREAVDERVRDALGALAARDVPLGGICTGAYALMACGLLDGYRCAVHWENLSALHAEFPRVRFAD
ELFAVDRDRLTCTGGTAPLDLMLNLVGARLGQPLAAQVSEQFILERIRGATDPQPIPVDARVGFSRAELIEVVRLMEANI
EEPLSLEELARLVRLSQRHLQRMFKIYLNVSPTHYYLTLRLKRARDLLRTTDASIARVTAVCGFHSPCHFSKAYRAQFGH
APSHERRVSAR

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI226510985, Length=115, Percent_Identity=30.4347826086957, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36440; Mature: 36309

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAAAAAPAACAEPVPSVAHFGFLTLPNFSMIAFTSAVEVLRMANYVARADHYRWSIFS
CCCCCCCCCCHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
LDGAPVRASNGIAVRPTQPLDVDDPPDVVIVCGGIRIREAVDERVRDALGALAARDVPLG
ECCCCEECCCCEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
GICTGAYALMACGLLDGYRCAVHWENLSALHAEFPRVRFADELFAVDRDRLTCTGGTAPL
HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCHH
DLMLNLVGARLGQPLAAQVSEQFILERIRGATDPQPIPVDARVGFSRAELIEVVRLMEAN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
IEEPLSLEELARLVRLSQRHLQRMFKIYLNVSPTHYYLTLRLKRARDLLRTTDASIARVT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHCCHHHHHHH
AVCGFHSPCHFSKAYRAQFGHAPSHERRVSAR
HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSAAAAAPAACAEPVPSVAHFGFLTLPNFSMIAFTSAVEVLRMANYVARADHYRWSIFS
CCCCCCCCCHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
LDGAPVRASNGIAVRPTQPLDVDDPPDVVIVCGGIRIREAVDERVRDALGALAARDVPLG
ECCCCEECCCCEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
GICTGAYALMACGLLDGYRCAVHWENLSALHAEFPRVRFADELFAVDRDRLTCTGGTAPL
HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCHH
DLMLNLVGARLGQPLAAQVSEQFILERIRGATDPQPIPVDARVGFSRAELIEVVRLMEAN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
IEEPLSLEELARLVRLSQRHLQRMFKIYLNVSPTHYYLTLRLKRARDLLRTTDASIARVT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHCCHHHHHHH
AVCGFHSPCHFSKAYRAQFGHAPSHERRVSAR
HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]