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The map label for this gene is 53722450

Identifier: 53722450

GI number: 53722450

Start: 1937183

End: 1938133

Strand: Reverse

Name: 53722450

Synonym: BPSS1423

Alternate gene names: NA

Gene position: 1938133-1937183 (Counterclockwise)

Preceding gene: 53722451

Following gene: 53722449

Centisome position: 61.08

GC content: 64.35

Gene sequence:

>951_bases
ATGAAGCGAAATCTGATCGCGGCGGCCTGCGGGCTCGCCATCGCGGCCGCGCCGTTCGCGAGCGCCCGGGCGGGCGATGC
GCCGACCTGCAAGGCGGTGCGCTTTGCGGATGTCGGCTGGACCGACATCGCCGCGACGACGGGGCTCGCGTCGACGATGC
TCGCCGGGCTCGGCTATGCGCCGACGAAGACGATCGCTTCGGTGCCGATCACGTTCGCGGGGATCAAGAGCAAGCAGATC
GACGTGTTTCTCGGCTACTGGTCGCCGACGATGGACCCGATGATCGCGCCGTTCACGAAGGCGGGCACGATCAAGGTGCT
CGCCGCGCCGAATCTGACGGGCGCGAAGTACACGCTCGCCGTGCCCGATTACGTGTATCAGGGCGGCCTGAAATCGTTCG
CCGACATCCAGAAATACGCGGACAAGCTCAACGGCAGGATCTACGGGATCGAGCCCGGCAACGACGGCAACGCGCTCATC
AAGAAGATGATCGACGGCAACCAGTTCGGCCTCGGCAAGTTCAAGCTCGTCGAATCGAGCGAGGCGGGGATGCTCGTCGA
GGTGAACCGCGCGATCCGCGACAAGCAGTGGATCGTGTTCCTCGGCTGGGAGCCGCATCCGATGAACGTGCAGATGAAGA
TCGATTACCTGAGCGGCGGCGACGACGTGTTCGGCCCGAACTACGGCGAGGCGAAGGTGCTGACCGCCACGCCGCCCGAT
TACGCGGCGCGTTGCCCGAACGTCGCGAAGTTCGTGTCGAACCTGCAGTTCACGACATCGATCGAGAACCATGTGATGCT
GCCGATCATGAACAAGGAAGACCCGAACAAGGCGGCGGCCGAATGGCTGAAGGCGAATCCGCAGTCGCTCGACAAGTGGC
TCGCCGGCGTGACGACGTTCGACGGCAAGCCGGGGCTGCCGGCCGTCAAGCACTACCTCGGCATTCAGTAA

Upstream 100 bases:

>100_bases
ACGCATTGAAACAAGCGCGTGGCCGCCGGGGTCGCGGCGCGCGCGTCAGCCACGAACCGATCCCATGTTGACGACATCTT
TGATGATGAGGAGAAGCACG

Downstream 100 bases:

>100_bases
TGCCGCGCGCGTCGCGCGGCCCGCTTCGCGCGACGCGCCGTCGAACCGGTTTCGGCGTTCGCGGTTCGTCGTTCGTCGTT
CGTCGGGCAGTTGCGTCGGG

Product: glycine betaine/L-proline-binding protein ABC transporter component

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKRNLIAAACGLAIAAAPFASARAGDAPTCKAVRFADVGWTDIAATTGLASTMLAGLGYAPTKTIASVPITFAGIKSKQI
DVFLGYWSPTMDPMIAPFTKAGTIKVLAAPNLTGAKYTLAVPDYVYQGGLKSFADIQKYADKLNGRIYGIEPGNDGNALI
KKMIDGNQFGLGKFKLVESSEAGMLVEVNRAIRDKQWIVFLGWEPHPMNVQMKIDYLSGGDDVFGPNYGEAKVLTATPPD
YAARCPNVAKFVSNLQFTTSIENHVMLPIMNKEDPNKAAAEWLKANPQSLDKWLAGVTTFDGKPGLPAVKHYLGIQ

Sequences:

>Translated_316_residues
MKRNLIAAACGLAIAAAPFASARAGDAPTCKAVRFADVGWTDIAATTGLASTMLAGLGYAPTKTIASVPITFAGIKSKQI
DVFLGYWSPTMDPMIAPFTKAGTIKVLAAPNLTGAKYTLAVPDYVYQGGLKSFADIQKYADKLNGRIYGIEPGNDGNALI
KKMIDGNQFGLGKFKLVESSEAGMLVEVNRAIRDKQWIVFLGWEPHPMNVQMKIDYLSGGDDVFGPNYGEAKVLTATPPD
YAARCPNVAKFVSNLQFTTSIENHVMLPIMNKEDPNKAAAEWLKANPQSLDKWLAGVTTFDGKPGLPAVKHYLGIQ
>Mature_316_residues
MKRNLIAAACGLAIAAAPFASARAGDAPTCKAVRFADVGWTDIAATTGLASTMLAGLGYAPTKTIASVPITFAGIKSKQI
DVFLGYWSPTMDPMIAPFTKAGTIKVLAAPNLTGAKYTLAVPDYVYQGGLKSFADIQKYADKLNGRIYGIEPGNDGNALI
KKMIDGNQFGLGKFKLVESSEAGMLVEVNRAIRDKQWIVFLGWEPHPMNVQMKIDYLSGGDDVFGPNYGEAKVLTATPPD
YAARCPNVAKFVSNLQFTTSIENHVMLPIMNKEDPNKAAAEWLKANPQSLDKWLAGVTTFDGKPGLPAVKHYLGIQ

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33893; Mature: 33893

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNLIAAACGLAIAAAPFASARAGDAPTCKAVRFADVGWTDIAATTGLASTMLAGLGYA
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC
PTKTIASVPITFAGIKSKQIDVFLGYWSPTMDPMIAPFTKAGTIKVLAAPNLTGAKYTLA
CCHHHHCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE
VPDYVYQGGLKSFADIQKYADKLNGRIYGIEPGNDGNALIKKMIDGNQFGLGKFKLVESS
CCHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECC
EAGMLVEVNRAIRDKQWIVFLGWEPHPMNVQMKIDYLSGGDDVFGPNYGEAKVLTATPPD
CCCEEEEECHHHCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCH
YAARCPNVAKFVSNLQFTTSIENHVMLPIMNKEDPNKAAAEWLKANPQSLDKWLAGVTTF
HHHCCCHHHHHHHCCEEEEECCCEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCEEC
DGKPGLPAVKHYLGIQ
CCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKRNLIAAACGLAIAAAPFASARAGDAPTCKAVRFADVGWTDIAATTGLASTMLAGLGYA
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC
PTKTIASVPITFAGIKSKQIDVFLGYWSPTMDPMIAPFTKAGTIKVLAAPNLTGAKYTLA
CCHHHHCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE
VPDYVYQGGLKSFADIQKYADKLNGRIYGIEPGNDGNALIKKMIDGNQFGLGKFKLVESS
CCHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECC
EAGMLVEVNRAIRDKQWIVFLGWEPHPMNVQMKIDYLSGGDDVFGPNYGEAKVLTATPPD
CCCEEEEECHHHCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCH
YAARCPNVAKFVSNLQFTTSIENHVMLPIMNKEDPNKAAAEWLKANPQSLDKWLAGVTTF
HHHCCCHHHHHHHCCEEEEECCCEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCEEC
DGKPGLPAVKHYLGIQ
CCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]