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The map label for this gene is amaB [H]

Identifier: 53722274

GI number: 53722274

Start: 1695207

End: 1696586

Strand: Reverse

Name: amaB [H]

Synonym: BPSS1251

Alternate gene names: 53722274

Gene position: 1696586-1695207 (Counterclockwise)

Preceding gene: 53722275

Following gene: 53722273

Centisome position: 53.47

GC content: 74.13

Gene sequence:

>1380_bases
GTGTGGGAAATTGACGGTAGGCGGCTCTGGAACAGCCTGACGGAACTCGCGCGAATCGGCGGCACCGCGCGCGGCGGCGT
GCGCCGGCTCGCGCTGACCGAGGCCGACCGGCGCGGCCGCGAACGCTTCGCGCAATGGTGTCGCGACGCGGGGATGGCGG
TGCGCGTCGATGCGATCGGCAACCTGTTCGCCCGGCGCGCCGGCGCGGACGACACGCAGCCGGCCGTGCTCGTCGGCAGT
CATCTCGACACGCAGCCCGAAGGGGGGCGCTTCGACGGCGCGTACGGCGTGCTCGCCGGGCTCGAGCTCGTGCGCACGCT
GAACGATCGCGGGATCGTCACCGGCAAGCCGATCGAGATCGTATCGTGGACCAACGAGGAGGGCGCGCGCTTCACGCCGG
CGATGCTCGGCTCGGCGGTGTTTACCGGCGCATTGCCGCTCGACGCGGCGCTCGCCGCGCGCGATGCGGACGGCATCGCG
CTTGCCGAGGCGCTCGAAGCGTGCGGCTATCGCGATGCGCTGCGCTCGGCGTGGATGCGCGGCGCGCACGGGGCGCGCGG
CCTGGAGCCGGCGCTCGCGCCGCTGCACGAGCGCGTCGATGCGTACTTCGAGGCGCATATCGAGCAGGGCCCGGTGCTGG
AGCGGCACGGCGCGACGATCGGCGTCGTCACGGGCGGGCAGGCGATCCGCTGGCTCGACGCGACGGTCACGGGTGCGGCC
GCGCATGCCGGCACGACGCCGATGCCGTACCGCAAGGACGCGCTGTTCGCGAGCGCCGAGCTCGCGCTCGCGATCGAGGC
GCTCGTCGCGCGCCATGCGCCCGACGCGCTCGCGACGATCGGGCAGAGCGCGATCGACAACGCGTCGCGCAACACGATCG
CCGAGCGCGTCACGTTCAGCATCGATCTTCGCCATCCCGACGATGCGCGGCTCGACGCGATCGAGCGCGAGCTGCGCCGC
GTGTGCGCGCAAATCGTCGGGCGACGCGGCGTCGCGGTCGACATCAGCCGGCACTGGTCGAGCCCGGCGACGCCGTTCGA
TCCGGCGTGCATCGCGCTCGTCGAGGCGGCCGCGCGCGGCGGCGGCTATGCGCACGAGCGAATCGTGAGCGGCGCCGGGC
ACGATGCGGTTCATCTCGCGCGCTGCGTGCCGAGCGCGATGGTGTTCATTCCGTGCGTCGGCGGGCTGTCGCACAACGCA
GCCGAGCGTGCGTTGCCCGAGCACGTCGAGGCGGGCGCGAACGTGCTGCTCGGCGCGGTGCTCGCGCGCGCCGGCGTGCG
CGAGCGGGCGGCGCGATCGGCGCGCTCGCCGCGCCCGGCGCCGGCGATGCAGGCCGCGCATTCGGGCACGGACGCGGGCA
CCTTCGCGCAGCCGCATTGA

Upstream 100 bases:

>100_bases
GCTCGGCGGCGTGATCGCGCTCGACGCGCGCCGCCATCGGCGGGCCGACGTCGCCGACGCCGTGCTCACGCGCTGATTCA
AGAAAAGGAGGGAGATCTCG

Downstream 100 bases:

>100_bases
CCGATCGATCGTGGAGCGAAGCGACCCCGCATGCTGACATATTTTCATCCGGACCAACTGAAGCACAGTCCGCTCACTTA
CCTGTCGCGCGGCAAGATGC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MWEIDGRRLWNSLTELARIGGTARGGVRRLALTEADRRGRERFAQWCRDAGMAVRVDAIGNLFARRAGADDTQPAVLVGS
HLDTQPEGGRFDGAYGVLAGLELVRTLNDRGIVTGKPIEIVSWTNEEGARFTPAMLGSAVFTGALPLDAALAARDADGIA
LAEALEACGYRDALRSAWMRGAHGARGLEPALAPLHERVDAYFEAHIEQGPVLERHGATIGVVTGGQAIRWLDATVTGAA
AHAGTTPMPYRKDALFASAELALAIEALVARHAPDALATIGQSAIDNASRNTIAERVTFSIDLRHPDDARLDAIERELRR
VCAQIVGRRGVAVDISRHWSSPATPFDPACIALVEAAARGGGYAHERIVSGAGHDAVHLARCVPSAMVFIPCVGGLSHNA
AERALPEHVEAGANVLLGAVLARAGVRERAARSARSPRPAPAMQAAHSGTDAGTFAQPH

Sequences:

>Translated_459_residues
MWEIDGRRLWNSLTELARIGGTARGGVRRLALTEADRRGRERFAQWCRDAGMAVRVDAIGNLFARRAGADDTQPAVLVGS
HLDTQPEGGRFDGAYGVLAGLELVRTLNDRGIVTGKPIEIVSWTNEEGARFTPAMLGSAVFTGALPLDAALAARDADGIA
LAEALEACGYRDALRSAWMRGAHGARGLEPALAPLHERVDAYFEAHIEQGPVLERHGATIGVVTGGQAIRWLDATVTGAA
AHAGTTPMPYRKDALFASAELALAIEALVARHAPDALATIGQSAIDNASRNTIAERVTFSIDLRHPDDARLDAIERELRR
VCAQIVGRRGVAVDISRHWSSPATPFDPACIALVEAAARGGGYAHERIVSGAGHDAVHLARCVPSAMVFIPCVGGLSHNA
AERALPEHVEAGANVLLGAVLARAGVRERAARSARSPRPAPAMQAAHSGTDAGTFAQPH
>Mature_459_residues
MWEIDGRRLWNSLTELARIGGTARGGVRRLALTEADRRGRERFAQWCRDAGMAVRVDAIGNLFARRAGADDTQPAVLVGS
HLDTQPEGGRFDGAYGVLAGLELVRTLNDRGIVTGKPIEIVSWTNEEGARFTPAMLGSAVFTGALPLDAALAARDADGIA
LAEALEACGYRDALRSAWMRGAHGARGLEPALAPLHERVDAYFEAHIEQGPVLERHGATIGVVTGGQAIRWLDATVTGAA
AHAGTTPMPYRKDALFASAELALAIEALVARHAPDALATIGQSAIDNASRNTIAERVTFSIDLRHPDDARLDAIERELRR
VCAQIVGRRGVAVDISRHWSSPATPFDPACIALVEAAARGGGYAHERIVSGAGHDAVHLARCVPSAMVFIPCVGGLSHNA
AERALPEHVEAGANVLLGAVLARAGVRERAARSARSPRPAPAMQAAHSGTDAGTFAQPH

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=411, Percent_Identity=31.1435523114355, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 48442; Mature: 48442

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWEIDGRRLWNSLTELARIGGTARGGVRRLALTEADRRGRERFAQWCRDAGMAVRVDAIG
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH
NLFARRAGADDTQPAVLVGSHLDTQPEGGRFDGAYGVLAGLELVRTLNDRGIVTGKPIEI
HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
VSWTNEEGARFTPAMLGSAVFTGALPLDAALAARDADGIALAEALEACGYRDALRSAWMR
EEECCCCCCEECHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHH
GAHGARGLEPALAPLHERVDAYFEAHIEQGPVLERHGATIGVVTGGQAIRWLDATVTGAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEECCCEEEEEHHHHHCCH
AHAGTTPMPYRKDALFASAELALAIEALVARHAPDALATIGQSAIDNASRNTIAERVTFS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHEEEEE
IDLRHPDDARLDAIERELRRVCAQIVGRRGVAVDISRHWSSPATPFDPACIALVEAAARG
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCC
GGYAHERIVSGAGHDAVHLARCVPSAMVFIPCVGGLSHNAAERALPEHVEAGANVLLGAV
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LARAGVRERAARSARSPRPAPAMQAAHSGTDAGTFAQPH
HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MWEIDGRRLWNSLTELARIGGTARGGVRRLALTEADRRGRERFAQWCRDAGMAVRVDAIG
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH
NLFARRAGADDTQPAVLVGSHLDTQPEGGRFDGAYGVLAGLELVRTLNDRGIVTGKPIEI
HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
VSWTNEEGARFTPAMLGSAVFTGALPLDAALAARDADGIALAEALEACGYRDALRSAWMR
EEECCCCCCEECHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHH
GAHGARGLEPALAPLHERVDAYFEAHIEQGPVLERHGATIGVVTGGQAIRWLDATVTGAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEECCCEEEEEHHHHHCCH
AHAGTTPMPYRKDALFASAELALAIEALVARHAPDALATIGQSAIDNASRNTIAERVTFS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHEEEEE
IDLRHPDDARLDAIERELRRVCAQIVGRRGVAVDISRHWSSPATPFDPACIALVEAAARG
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCC
GGYAHERIVSGAGHDAVHLARCVPSAMVFIPCVGGLSHNAAERALPEHVEAGANVLLGAV
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LARAGVRERAARSARSPRPAPAMQAAHSGTDAGTFAQPH
HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]