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The map label for this gene is msr0960

Identifier: 53721872

GI number: 53721872

Start: 1134960

End: 1135202

Strand: Reverse

Name: msr0960

Synonym: BPSS0845a

Alternate gene names: NA

Gene position: 1135202-1134960 (Counterclockwise)

Preceding gene: 53721874

Following gene: 53721865

Centisome position: 35.78

GC content: 58.02

Gene sequence:

>243_bases
ATGCTCCCTTCTATTCATCACCCTCGTTATGTCGTGCTGCGCACGCATTTGCGCGCGCTGAGAAGAGCGGCCGGCCTCAC
GCAGACGCAATTGGCCGAGCGCCTGAGCATCGACCAGTCCTATCTCTCCAAGATCGAGCGCGGGGAACGCTACGTCGATA
TTCTCCTTTATCTCGATTGGTGCCGTCATTGCGGCGTCGAGCCAAACCACGCCGTATCGGAATTAATCGACGCGGGCGTT
TGA

Upstream 100 bases:

>100_bases
ACCATGTTGTTATGCTGAATAGTGCCGAAGTCAGTTTTCGGCTATCATAGCCCAATTAGGCCAAGGTGGACTATTTGGAT
TCAGCAGGGAGCATTCGCCC

Downstream 100 bases:

>100_bases
ATGGCGCATGCGAGCGCATCGCGCCATTTGAAACGATTTGAATGCCGCGCGGCGCCGGCCGCTTCGTTTGCCCGCGCATT
CGTTCGCCCGTCGCTGCGCC

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MLPSIHHPRYVVLRTHLRALRRAAGLTQTQLAERLSIDQSYLSKIERGERYVDILLYLDWCRHCGVEPNHAVSELIDAGV

Sequences:

>Translated_80_residues
MLPSIHHPRYVVLRTHLRALRRAAGLTQTQLAERLSIDQSYLSKIERGERYVDILLYLDWCRHCGVEPNHAVSELIDAGV
>Mature_80_residues
MLPSIHHPRYVVLRTHLRALRRAAGLTQTQLAERLSIDQSYLSKIERGERYVDILLYLDWCRHCGVEPNHAVSELIDAGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9222; Mature: 9222

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSIHHPRYVVLRTHLRALRRAAGLTQTQLAERLSIDQSYLSKIERGERYVDILLYLDW
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHH
CRHCGVEPNHAVSELIDAGV
HHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLPSIHHPRYVVLRTHLRALRRAAGLTQTQLAERLSIDQSYLSKIERGERYVDILLYLDW
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHH
CRHCGVEPNHAVSELIDAGV
HHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA