| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721865
Identifier: 53721865
GI number: 53721865
Start: 1124884
End: 1125723
Strand: Reverse
Name: 53721865
Synonym: BPSS0839
Alternate gene names: NA
Gene position: 1125723-1124884 (Counterclockwise)
Preceding gene: 53721872
Following gene: 53721864
Centisome position: 35.48
GC content: 70.0
Gene sequence:
>840_bases ATGAGCTACAAGAGCATCCTGGTCCACCTCGACACGAGCGATCGCGCACGCGCGCGGCTCGAGACCGCGCTGACGCTCGC GCGCCAGTTCGGCGCGTACCTGAGCGCCGTCTTCGCCGTCTACACCCCCGAGCCGACGTCGTTCTACGTGATGGCGGGCA CCGCCGACTACTTCGCCGATCAGCAAAGGCGGCGCGACGAGAAGCGCGCGGCGCTCGAGCGCCTGTTCCACGCCGAACTC AAGCGCGCGGACGTCGAGGGCCAGTGGATCGTCGCCGACGCGCGCGCGAACGAAGCGGTGCCGCATTACGCGCGCTACGC GGATCTCGTGATCGCCGGCCAGACCGATCCGGACGATCCGGAAACCTATGTCGACGACAGCTTCCCCGACACGCTCGTGC TGTCGGCCGGCCGCCCGGTGCTGCTGCTGCCGTACGCGGGCATGCCGTCGGCGATTGGCACGCGCGTGCTCGTCGCGTGG GACGGCAGCCGCGAGGCGACGCGCGCCGTTCACGACGCGGCGCCGTTCCTCGCGCTCGCGACGAAGACGACGATCGTCAC CGTGAACGGCGCCGCGCACGAGCCGCCCGGCGCGCGAATTCCGGGCGCCGACATCGCGCTCACGCTCGCGCGGCATCACG CGAACATCGACGTGCGCGACCTCGAACGCGCGCGCGACGCGTCGATCGGCGACGTACTGCTGTCGCACGCGTACGAATCG GGCACCGATCTGCTCGTGATGGGCGCATACGGCCACGCGCGCTGGAAGGAGCTGATTCTCGGCGGCGTGACGCGCACGAT CTTTGCGTCGATGACGGTGCCGGTGCTGATGTCGCACTGA
Upstream 100 bases:
>100_bases GCGCTTTGATCTGAGTCAAGCGCGCCGCCCGCGCGCTTCATAGACTGGGGGCATACGTCCAAAGCGGCGCGCGACGCGCC GGAACCTAGGAGAACGAGCG
Downstream 100 bases:
>100_bases GCGGCGCCGCCGCGCGCGCCGCCCGACGCCGCCCGCAGAGGCGCGCCGCGGCAGCGGGCCGAGCCGCGCGGGCGCGCTTG CGGCGGCAGGCCGGGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSYKSILVHLDTSDRARARLETALTLARQFGAYLSAVFAVYTPEPTSFYVMAGTADYFADQQRRRDEKRAALERLFHAEL KRADVEGQWIVADARANEAVPHYARYADLVIAGQTDPDDPETYVDDSFPDTLVLSAGRPVLLLPYAGMPSAIGTRVLVAW DGSREATRAVHDAAPFLALATKTTIVTVNGAAHEPPGARIPGADIALTLARHHANIDVRDLERARDASIGDVLLSHAYES GTDLLVMGAYGHARWKELILGGVTRTIFASMTVPVLMSH
Sequences:
>Translated_279_residues MSYKSILVHLDTSDRARARLETALTLARQFGAYLSAVFAVYTPEPTSFYVMAGTADYFADQQRRRDEKRAALERLFHAEL KRADVEGQWIVADARANEAVPHYARYADLVIAGQTDPDDPETYVDDSFPDTLVLSAGRPVLLLPYAGMPSAIGTRVLVAW DGSREATRAVHDAAPFLALATKTTIVTVNGAAHEPPGARIPGADIALTLARHHANIDVRDLERARDASIGDVLLSHAYES GTDLLVMGAYGHARWKELILGGVTRTIFASMTVPVLMSH >Mature_278_residues SYKSILVHLDTSDRARARLETALTLARQFGAYLSAVFAVYTPEPTSFYVMAGTADYFADQQRRRDEKRAALERLFHAELK RADVEGQWIVADARANEAVPHYARYADLVIAGQTDPDDPETYVDDSFPDTLVLSAGRPVLLLPYAGMPSAIGTRVLVAWD GSREATRAVHDAAPFLALATKTTIVTVNGAAHEPPGARIPGADIALTLARHHANIDVRDLERARDASIGDVLLSHAYESG TDLLVMGAYGHARWKELILGGVTRTIFASMTVPVLMSH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30427; Mature: 30296
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKSILVHLDTSDRARARLETALTLARQFGAYLSAVFAVYTPEPTSFYVMAGTADYFAD CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCHHHHHH QQRRRDEKRAALERLFHAELKRADVEGQWIVADARANEAVPHYARYADLVIAGQTDPDDP HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHEEEEEECCCCCCCC ETYVDDSFPDTLVLSAGRPVLLLPYAGMPSAIGTRVLVAWDGSREATRAVHDAAPFLALA CCCCCCCCCCEEEEECCCCEEEEECCCCCHHHCCEEEEEECCCCHHHHHHHHHCCCEEEE TKTTIVTVNGAAHEPPGARIPGADIALTLARHHANIDVRDLERARDASIGDVLLSHAYES EEEEEEEECCCCCCCCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHCCCHHHHHHHHHHCC GTDLLVMGAYGHARWKELILGGVTRTIFASMTVPVLMSH CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure SYKSILVHLDTSDRARARLETALTLARQFGAYLSAVFAVYTPEPTSFYVMAGTADYFAD CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCHHHHHH QQRRRDEKRAALERLFHAELKRADVEGQWIVADARANEAVPHYARYADLVIAGQTDPDDP HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHEEEEEECCCCCCCC ETYVDDSFPDTLVLSAGRPVLLLPYAGMPSAIGTRVLVAWDGSREATRAVHDAAPFLALA CCCCCCCCCCEEEEECCCCEEEEECCCCCHHHCCEEEEEECCCCHHHHHHHHHCCCEEEE TKTTIVTVNGAAHEPPGARIPGADIALTLARHHANIDVRDLERARDASIGDVLLSHAYES EEEEEEEECCCCCCCCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHCCCHHHHHHHHHHCC GTDLLVMGAYGHARWKELILGGVTRTIFASMTVPVLMSH CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA