Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

Click here to switch to the map view.

The map label for this gene is 53721865

Identifier: 53721865

GI number: 53721865

Start: 1124884

End: 1125723

Strand: Reverse

Name: 53721865

Synonym: BPSS0839

Alternate gene names: NA

Gene position: 1125723-1124884 (Counterclockwise)

Preceding gene: 53721872

Following gene: 53721864

Centisome position: 35.48

GC content: 70.0

Gene sequence:

>840_bases
ATGAGCTACAAGAGCATCCTGGTCCACCTCGACACGAGCGATCGCGCACGCGCGCGGCTCGAGACCGCGCTGACGCTCGC
GCGCCAGTTCGGCGCGTACCTGAGCGCCGTCTTCGCCGTCTACACCCCCGAGCCGACGTCGTTCTACGTGATGGCGGGCA
CCGCCGACTACTTCGCCGATCAGCAAAGGCGGCGCGACGAGAAGCGCGCGGCGCTCGAGCGCCTGTTCCACGCCGAACTC
AAGCGCGCGGACGTCGAGGGCCAGTGGATCGTCGCCGACGCGCGCGCGAACGAAGCGGTGCCGCATTACGCGCGCTACGC
GGATCTCGTGATCGCCGGCCAGACCGATCCGGACGATCCGGAAACCTATGTCGACGACAGCTTCCCCGACACGCTCGTGC
TGTCGGCCGGCCGCCCGGTGCTGCTGCTGCCGTACGCGGGCATGCCGTCGGCGATTGGCACGCGCGTGCTCGTCGCGTGG
GACGGCAGCCGCGAGGCGACGCGCGCCGTTCACGACGCGGCGCCGTTCCTCGCGCTCGCGACGAAGACGACGATCGTCAC
CGTGAACGGCGCCGCGCACGAGCCGCCCGGCGCGCGAATTCCGGGCGCCGACATCGCGCTCACGCTCGCGCGGCATCACG
CGAACATCGACGTGCGCGACCTCGAACGCGCGCGCGACGCGTCGATCGGCGACGTACTGCTGTCGCACGCGTACGAATCG
GGCACCGATCTGCTCGTGATGGGCGCATACGGCCACGCGCGCTGGAAGGAGCTGATTCTCGGCGGCGTGACGCGCACGAT
CTTTGCGTCGATGACGGTGCCGGTGCTGATGTCGCACTGA

Upstream 100 bases:

>100_bases
GCGCTTTGATCTGAGTCAAGCGCGCCGCCCGCGCGCTTCATAGACTGGGGGCATACGTCCAAAGCGGCGCGCGACGCGCC
GGAACCTAGGAGAACGAGCG

Downstream 100 bases:

>100_bases
GCGGCGCCGCCGCGCGCGCCGCCCGACGCCGCCCGCAGAGGCGCGCCGCGGCAGCGGGCCGAGCCGCGCGGGCGCGCTTG
CGGCGGCAGGCCGGGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSYKSILVHLDTSDRARARLETALTLARQFGAYLSAVFAVYTPEPTSFYVMAGTADYFADQQRRRDEKRAALERLFHAEL
KRADVEGQWIVADARANEAVPHYARYADLVIAGQTDPDDPETYVDDSFPDTLVLSAGRPVLLLPYAGMPSAIGTRVLVAW
DGSREATRAVHDAAPFLALATKTTIVTVNGAAHEPPGARIPGADIALTLARHHANIDVRDLERARDASIGDVLLSHAYES
GTDLLVMGAYGHARWKELILGGVTRTIFASMTVPVLMSH

Sequences:

>Translated_279_residues
MSYKSILVHLDTSDRARARLETALTLARQFGAYLSAVFAVYTPEPTSFYVMAGTADYFADQQRRRDEKRAALERLFHAEL
KRADVEGQWIVADARANEAVPHYARYADLVIAGQTDPDDPETYVDDSFPDTLVLSAGRPVLLLPYAGMPSAIGTRVLVAW
DGSREATRAVHDAAPFLALATKTTIVTVNGAAHEPPGARIPGADIALTLARHHANIDVRDLERARDASIGDVLLSHAYES
GTDLLVMGAYGHARWKELILGGVTRTIFASMTVPVLMSH
>Mature_278_residues
SYKSILVHLDTSDRARARLETALTLARQFGAYLSAVFAVYTPEPTSFYVMAGTADYFADQQRRRDEKRAALERLFHAELK
RADVEGQWIVADARANEAVPHYARYADLVIAGQTDPDDPETYVDDSFPDTLVLSAGRPVLLLPYAGMPSAIGTRVLVAWD
GSREATRAVHDAAPFLALATKTTIVTVNGAAHEPPGARIPGADIALTLARHHANIDVRDLERARDASIGDVLLSHAYESG
TDLLVMGAYGHARWKELILGGVTRTIFASMTVPVLMSH

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30427; Mature: 30296

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKSILVHLDTSDRARARLETALTLARQFGAYLSAVFAVYTPEPTSFYVMAGTADYFAD
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCHHHHHH
QQRRRDEKRAALERLFHAELKRADVEGQWIVADARANEAVPHYARYADLVIAGQTDPDDP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHEEEEEECCCCCCCC
ETYVDDSFPDTLVLSAGRPVLLLPYAGMPSAIGTRVLVAWDGSREATRAVHDAAPFLALA
CCCCCCCCCCEEEEECCCCEEEEECCCCCHHHCCEEEEEECCCCHHHHHHHHHCCCEEEE
TKTTIVTVNGAAHEPPGARIPGADIALTLARHHANIDVRDLERARDASIGDVLLSHAYES
EEEEEEEECCCCCCCCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHCCCHHHHHHHHHHCC
GTDLLVMGAYGHARWKELILGGVTRTIFASMTVPVLMSH
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
SYKSILVHLDTSDRARARLETALTLARQFGAYLSAVFAVYTPEPTSFYVMAGTADYFAD
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCHHHHHH
QQRRRDEKRAALERLFHAELKRADVEGQWIVADARANEAVPHYARYADLVIAGQTDPDDP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHEEEEEECCCCCCCC
ETYVDDSFPDTLVLSAGRPVLLLPYAGMPSAIGTRVLVAWDGSREATRAVHDAAPFLALA
CCCCCCCCCCEEEEECCCCEEEEECCCCCHHHCCEEEEEECCCCHHHHHHHHHCCCEEEE
TKTTIVTVNGAAHEPPGARIPGADIALTLARHHANIDVRDLERARDASIGDVLLSHAYES
EEEEEEEECCCCCCCCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHCCCHHHHHHHHHHCC
GTDLLVMGAYGHARWKELILGGVTRTIFASMTVPVLMSH
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA