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The map label for this gene is oprM

Identifier: 53721760

GI number: 53721760

Start: 985782

End: 987641

Strand: Reverse

Name: oprM

Synonym: BPSS0734

Alternate gene names: 53721760

Gene position: 987641-985782 (Counterclockwise)

Preceding gene: 53721761

Following gene: 53721759

Centisome position: 31.13

GC content: 70.86

Gene sequence:

>1860_bases
ATGCATAGCCCACCGTTTCTTTCATCGCCCAAGCGCGCGCTGCCGATCGCGCTCGCGCTCAGCCTCGCCGGTTGCTCGAT
GGAGCCGGCCTACCAGCGGCCCGATGCGCCGATGCCGTCCGCGTATCCGAACGGCCCCGCCTACGCGACGCCGGGCGCGC
CGCGCGCGAACCCGGGCGAGCCGGCGGCGGCCGAGCTCGGCTGGCGGAATTTCCTCGCCGACGCGCAGTTGCAGCAGCTC
GTCGCGCTCGCGCTCGCGAACAACCGCGACCTGCGCGTCGCGACGCTCGACATCGACGAAGCGCGCGCGCTGTACCGCAT
CCAGCGCGCCGCGCAGTTTCCCGCAATCGATGCGAGCGTCGGACTCACGAGCCAGCGCATGAGCCCCGCGCTGCGCGCGC
CGGGGCAGTCCGCGGCGATCAACAGCTATGACGCGAGCGTCGGCCTCACCCATTTCGAGATCGACCTGTTCGGCCGCGTG
CGCAGCCTGAGCCACGCCGCGCAGGAGCAATACCTCGCGACCGAGGAGGCGCGGCGCAGCGTCCACATCAGCCTCGTCGC
CGAAGTCGCGAACACCTACCTCACGCTGCTCGCCGATCGCGCGCTGCTCGCGCTCGCGCAGGACACGCTCAGGAGCCAGC
AGGACGCCGCCGACATGATCCACCGCGGCAAGCAGGCGGGCGCGATGGCGCAGCTCGACGAGCATCGCGCGGACACGCAG
GTGCAGACCGCACGCGTCGCCGCCGAGCAATACACGCGGCAGATCGCGCAGGACGAGAACGCGCTTGCCGTGCTGATCGG
CGGGCCGCTGCCGGCCGGCGTGTCGCGCGCGGCGCCGCTCGACGATCGCGCGCTGCTCGCGGAGTTCCCGGCGGGCCTGC
CGTCGACGCTGCTCGAGCGCCGCCCCGACATCATGGCCGCCGAGCATCGGCTCATCGCCGCGAACGCGAATATCGGCGCG
GCGCGCGCGGCGTTCTTCCCGAGGATCACGTTGACGGGCGCGCTCGGCGTGGCGAGCGCGAGCCTCGCGGGGCTGTTCTC
CGGCGGCGTCGCGTGGCTGTTCGTGCCGCAGCTCACGCTGCCGATCTTCAACGCGGGCAGCAATCAGGCGAATCTCGATC
TCGCGACGGTGCGCCGCGACATCAACGTGGCCGGCTACGAGCACACGATCCAGGACGCGTTCCGCGAGGTCGCCGACAAC
CTGGCCGCACGCGCGACCTACGAGCGGGAAGTGAAAGCGCAGGAGGCGATGATCCGCGACCTGGCCGAGACGAAGCGGCT
GGCCGACATGCGTTTTCGCAACGGCGTCGACGACTACTTCGGCGTGTTCGATGCGCAACGCCAGCTGTTCGCCGCGCAGC
AACTGCTCGTCACCTACAAGCTTGCCGGGCTGACGAGCCGCGTGACGCTATACAAGGCGCTCGGCGGCGGCTGGGTCGAA
TCGGCGGGCGCGGCGGCCGCGCAACCGCGGACGGGGCAGGCCGCGCCGATGGCTCGACCGGCAGCCACTCCACCCCAGAC
GACGCGACCCGCGCCGGTTGCTCGATCGCAGACGGTTCCACCGCGAACGGTTCAGCCCCCGATCGCCCAACCGGCAACCG
CGCAACCGCAAACGGCGCAAGCCGCGCCGGTTGCTCAGTCGCAGACGATTCCACTGCGAACGGTCCAGCCGCCTATCGCC
CAATCGTCAACCTCTCAACCGCAAACGGCGCAAGCCGCGCCGATCACTCAAGCGCGGACGACACCACTCCGAACGGCTCA
GCCGCCCGCCGCTCGACAACAGGCGCCGCAATCCGCTCCGGCGGCTCAACCGGAGGCAGCTCCACCGCAAACGGCCCAAC
CGCCGATTTTTCAGCCGTAA

Upstream 100 bases:

>100_bases
GCTCGCGATCTCGCGCCTGATGCAGCGCGCGCTGTCCGGCTGAACGCCGCGAGCGCCGCTTGCCCACCGTCTCGATTCTC
GATGCGAGGAGCCGCCGACC

Downstream 100 bases:

>100_bases
GCAAGCCGACAACATCGCGACGGGTATCGACGCAACGCACGCCCCCCTGCAAGCGACGCGATAAACCGCGCAAAAGACCG
CGCCAACCGCGCCAGCCACG

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MHSPPFLSSPKRALPIALALSLAGCSMEPAYQRPDAPMPSAYPNGPAYATPGAPRANPGEPAAAELGWRNFLADAQLQQL
VALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPALRAPGQSAAINSYDASVGLTHFEIDLFGRV
RSLSHAAQEQYLATEEARRSVHISLVAEVANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQ
VQTARVAAEQYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDRALLAEFPAGLPSTLLERRPDIMAAEHRLIAANANIGA
ARAAFFPRITLTGALGVASASLAGLFSGGVAWLFVPQLTLPIFNAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADN
LAARATYEREVKAQEAMIRDLAETKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGWVE
SAGAAAAQPRTGQAAPMARPAATPPQTTRPAPVARSQTVPPRTVQPPIAQPATAQPQTAQAAPVAQSQTIPLRTVQPPIA
QSSTSQPQTAQAAPITQARTTPLRTAQPPAARQQAPQSAPAAQPEAAPPQTAQPPIFQP

Sequences:

>Translated_619_residues
MHSPPFLSSPKRALPIALALSLAGCSMEPAYQRPDAPMPSAYPNGPAYATPGAPRANPGEPAAAELGWRNFLADAQLQQL
VALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPALRAPGQSAAINSYDASVGLTHFEIDLFGRV
RSLSHAAQEQYLATEEARRSVHISLVAEVANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQ
VQTARVAAEQYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDRALLAEFPAGLPSTLLERRPDIMAAEHRLIAANANIGA
ARAAFFPRITLTGALGVASASLAGLFSGGVAWLFVPQLTLPIFNAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADN
LAARATYEREVKAQEAMIRDLAETKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGWVE
SAGAAAAQPRTGQAAPMARPAATPPQTTRPAPVARSQTVPPRTVQPPIAQPATAQPQTAQAAPVAQSQTIPLRTVQPPIA
QSSTSQPQTAQAAPITQARTTPLRTAQPPAARQQAPQSAPAAQPEAAPPQTAQPPIFQP
>Mature_619_residues
MHSPPFLSSPKRALPIALALSLAGCSMEPAYQRPDAPMPSAYPNGPAYATPGAPRANPGEPAAAELGWRNFLADAQLQQL
VALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASVGLTSQRMSPALRAPGQSAAINSYDASVGLTHFEIDLFGRV
RSLSHAAQEQYLATEEARRSVHISLVAEVANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQ
VQTARVAAEQYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDRALLAEFPAGLPSTLLERRPDIMAAEHRLIAANANIGA
ARAAFFPRITLTGALGVASASLAGLFSGGVAWLFVPQLTLPIFNAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADN
LAARATYEREVKAQEAMIRDLAETKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGWVE
SAGAAAAQPRTGQAAPMARPAATPPQTTRPAPVARSQTVPPRTVQPPIAQPATAQPQTAQAAPVAQSQTIPLRTVQPPIA
QSSTSQPQTAQAAPITQARTTPLRTAQPPAARQQAPQSAPAAQPEAAPPQTAQPPIFQP

Specific function: The ability to export antibiotics and solvents is dramatically decreased in the presence of the proton conductor carbonyl cyanide m-chlorophenylhydrazone (CCCP), showing that an energized inner membrane is required for efflux. It is thought that the mexB

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Note=Attached to the outer membrane by a lipid anchor and via the transmembrane beta-barrel. The membrane anchor is not necessary for antibiotic efflux. In one report (PubMed:10889211) the Cys-18- Gly mutant is reported

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=478, Percent_Identity=41.2133891213389, Blast_Score=328, Evalue=5e-91,
Organism=Escherichia coli, GI2367348, Length=471, Percent_Identity=26.963906581741, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 65674; Mature: 65674

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSPPFLSSPKRALPIALALSLAGCSMEPAYQRPDAPMPSAYPNGPAYATPGAPRANPGE
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAAAELGWRNFLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCC
GLTSQRMSPALRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRS
CCCHHHCCHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VHISLVAEVANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHCCHH
VQTARVAAEQYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDRALLAEFPAGLPSTLLER
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHC
RPDIMAAEHRLIAANANIGAARAAFFPRITLTGALGVASASLAGLFSGGVAWLFVPQLTL
CCCHHHHCCEEEEECCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCEEEEEECHHHC
PIFNAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRD
EEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAETKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGWVE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SAGAAAAQPRTGQAAPMARPAATPPQTTRPAPVARSQTVPPRTVQPPIAQPATAQPQTAQ
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAPVAQSQTIPLRTVQPPIAQSSTSQPQTAQAAPITQARTTPLRTAQPPAARQQAPQSAP
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
AAQPEAAPPQTAQPPIFQP
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHSPPFLSSPKRALPIALALSLAGCSMEPAYQRPDAPMPSAYPNGPAYATPGAPRANPGE
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAAAELGWRNFLADAQLQQLVALALANNRDLRVATLDIDEARALYRIQRAAQFPAIDASV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCC
GLTSQRMSPALRAPGQSAAINSYDASVGLTHFEIDLFGRVRSLSHAAQEQYLATEEARRS
CCCHHHCCHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VHISLVAEVANTYLTLLADRALLALAQDTLRSQQDAADMIHRGKQAGAMAQLDEHRADTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHCCHH
VQTARVAAEQYTRQIAQDENALAVLIGGPLPAGVSRAAPLDDRALLAEFPAGLPSTLLER
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHC
RPDIMAAEHRLIAANANIGAARAAFFPRITLTGALGVASASLAGLFSGGVAWLFVPQLTL
CCCHHHHCCEEEEECCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCEEEEEECHHHC
PIFNAGSNQANLDLATVRRDINVAGYEHTIQDAFREVADNLAARATYEREVKAQEAMIRD
EEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAETKRLADMRFRNGVDDYFGVFDAQRQLFAAQQLLVTYKLAGLTSRVTLYKALGGGWVE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SAGAAAAQPRTGQAAPMARPAATPPQTTRPAPVARSQTVPPRTVQPPIAQPATAQPQTAQ
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAPVAQSQTIPLRTVQPPIAQSSTSQPQTAQAAPITQARTTPLRTAQPPAARQQAPQSAP
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
AAQPEAAPPQTAQPPIFQP
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8226684; 10889211; 10984043; 7968531; 8540696; 9401051; 9603892; 10952562 [H]