| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is crp [C]
Identifier: 53721756
GI number: 53721756
Start: 979524
End: 980234
Strand: Reverse
Name: crp [C]
Synonym: BPSS0730
Alternate gene names: 53721756
Gene position: 980234-979524 (Counterclockwise)
Preceding gene: 53721759
Following gene: 53721754
Centisome position: 30.89
GC content: 69.2
Gene sequence:
>711_bases GTGCGAGCGCCGGCCGCGGCGGCCGGCGCGGGCGAGCTGCGCGCGCTGTTCTCCCGCTGCGGCTGGTTCAACACGCTCGC GCCCGAGCATCAGGCGCTCGTCGTCGCGCAGTCGCACGCCGAGTACCGCGACGCGGGCGACTGGGTCGCGCGCCGGCAGG CGCCTTCCGAATACTGGATCGGCGTGCACCGCGGGCTCGTGAAGCTCGCGATCTACAACGCGTCCGGGCGCGGCTGCACG TTCTCCGGCGTGCCGTCGGGCGGCTGGTTCGGCGAAGGCAGCGTGATCAAGCGCGAGCTGCGCAAGTACGACGTGATCGC GATCCAGCGCTCGCTCGTGCTGTTCGTGCCGAGCGCGACGTTCCACGCGCTCCTCGACAGCAGCCTGCCGTTCACGGGCT TCGTGATCCGCCAGTTGAACAACCGGATGGGCGAATTCATCGCGTCGATCCAGAACAGCCGGCTACTCGACGTGAACGCG CGCGTCGCGCAGTCGCTCGCCCAGCTGTTCAACCCGGACCTGTATCCGGACACCGGCGCGACGCTCGCGATCTCGCAGGA GGAGCTCGGGATGCTGGTCGGCGTGTCGCGGCAGCGAATCAATCAGGCGCTTCAGCATCTCGAGCGGCTCGGCGCGGTGC GGCTCGCGTACAACCAGATCGACGTGCTCGATCTGCCGAAGCTCGCGGCGTTCGGGATGGAGCAGATCTGA
Upstream 100 bases:
>100_bases GGATGAAGCGGCCCGCGCCGACGAGGCTGCCGCAGAGCCTGCCTCGGCGCCGGCCGAAGCGCCCGTCGAAGCGCCCGTCG AAACATCAGCCGCCGCGCCC
Downstream 100 bases:
>100_bases CGGCCCGGTTGGCGGCCGCGGCCGCCATCGCGTTTCGCCGTCCATGATGCCGACCGGTCGCGGCCACGCGCGGCCTGCGC TGTCGCCGCCGCCGTCCGCT
Product: regulatory protein
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator; Crp Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcription Regulator Protein; Cyclic-Nucleotide-Gated Cation Channel; CNMP Regulatory Protein; HTH Crp Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator Crp; Transcriptional Regulator Crp Family
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MRAPAAAAGAGELRALFSRCGWFNTLAPEHQALVVAQSHAEYRDAGDWVARRQAPSEYWIGVHRGLVKLAIYNASGRGCT FSGVPSGGWFGEGSVIKRELRKYDVIAIQRSLVLFVPSATFHALLDSSLPFTGFVIRQLNNRMGEFIASIQNSRLLDVNA RVAQSLAQLFNPDLYPDTGATLAISQEELGMLVGVSRQRINQALQHLERLGAVRLAYNQIDVLDLPKLAAFGMEQI
Sequences:
>Translated_236_residues MRAPAAAAGAGELRALFSRCGWFNTLAPEHQALVVAQSHAEYRDAGDWVARRQAPSEYWIGVHRGLVKLAIYNASGRGCT FSGVPSGGWFGEGSVIKRELRKYDVIAIQRSLVLFVPSATFHALLDSSLPFTGFVIRQLNNRMGEFIASIQNSRLLDVNA RVAQSLAQLFNPDLYPDTGATLAISQEELGMLVGVSRQRINQALQHLERLGAVRLAYNQIDVLDLPKLAAFGMEQI >Mature_236_residues MRAPAAAAGAGELRALFSRCGWFNTLAPEHQALVVAQSHAEYRDAGDWVARRQAPSEYWIGVHRGLVKLAIYNASGRGCT FSGVPSGGWFGEGSVIKRELRKYDVIAIQRSLVLFVPSATFHALLDSSLPFTGFVIRQLNNRMGEFIASIQNSRLLDVNA RVAQSLAQLFNPDLYPDTGATLAISQEELGMLVGVSRQRINQALQHLERLGAVRLAYNQIDVLDLPKLAAFGMEQI
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25894; Mature: 25894
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPAAAAGAGELRALFSRCGWFNTLAPEHQALVVAQSHAEYRDAGDWVARRQAPSEYWI CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHH GVHRGLVKLAIYNASGRGCTFSGVPSGGWFGEGSVIKRELRKYDVIAIQRSLVLFVPSAT HHHHCEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHEECEEEEEECCHH FHALLDSSLPFTGFVIRQLNNRMGEFIASIQNSRLLDVNARVAQSLAQLFNPDLYPDTGA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCC TLAISQEELGMLVGVSRQRINQALQHLERLGAVRLAYNQIDVLDLPKLAAFGMEQI EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC >Mature Secondary Structure MRAPAAAAGAGELRALFSRCGWFNTLAPEHQALVVAQSHAEYRDAGDWVARRQAPSEYWI CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHH GVHRGLVKLAIYNASGRGCTFSGVPSGGWFGEGSVIKRELRKYDVIAIQRSLVLFVPSAT HHHHCEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHEECEEEEEECCHH FHALLDSSLPFTGFVIRQLNNRMGEFIASIQNSRLLDVNARVAQSLAQLFNPDLYPDTGA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCC TLAISQEELGMLVGVSRQRINQALQHLERLGAVRLAYNQIDVLDLPKLAAFGMEQI EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA