| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is argM [C]
Identifier: 53721505
GI number: 53721505
Start: 637724
End: 639142
Strand: Reverse
Name: argM [C]
Synonym: BPSS0468
Alternate gene names: 53721505
Gene position: 639142-637724 (Counterclockwise)
Preceding gene: 53721506
Following gene: 53721504
Centisome position: 20.14
GC content: 67.37
Gene sequence:
>1419_bases ATGAGCTACCGACCGAGCAACGCATCCGCATGGATTCAACCCGCCGCGCCCGCGCACCGCACGAGCGCCGAATACCGCGC GCTCGACGCCGCGCACCACCTCCACCCGTTCTCGGACATGGGCTCGCTCAATCGCGCGGGCAGCCGCGTGATCGTGAAGG CCGAAGGCGTCCACCTGTGGGATTCCGACGGCAACAGGATCATCGACGGCATGGCCGGGCTCTGGTGCGTGAACGTCGGC TACGGCCGCGACGAGCTGATCGAGGCCGGCAGCCGCCAGTTGCGCGAGCTGCCGTTCTACAACACCTTCTTCAAGACCAC CCATCCGCCCGTCATCGAGCTGTCCGCGCTGCTCGCGCAGATCGCGCCGCCCGCGTTCAACCGCTTCTTCTATTGCAACA GCGGCTCCGAGGGCAACGACACGGTGCTGCGCATCGCGCATCAGTACTGGCGCGCGCAGAACCGCCCGCAGAAGAAGTTC GTCATTTCGCGCCGAAACGGCTACCACGGCTCGACGATCGCGGGCGCGACGCTCGGCGGCATGAGCTACATGCACGAGCA GATGCCCTCGAAGGTCGAGCACATCGTCCACATCGATCAGCCCTATTACTTCGGCGAAGCGCGCGAGGGGCAGACGCCCG AGGCGTTCGGCCTCGAGCGCGCGCGACAGCTCGAAGCGAAGATTCTCGAGCTCGGCGCGCAGAACGTCGCGGCCTTCATC GGCGAGCCGTTCCAGGGCGCGGGCGGCGTGATCTTTCCGCCGTCGACGTACTGGCCGGAGATCGAGCGGATCTGCCGCCA GTACGACGTGCTGCTCGTCGCCGACGAAGTGATCGGCGGCTTCGGGCGCACCGGCGAATGGTTCGCGCACCAGCACTTCG GCTTCGCGCCCGACCTGATGACGCTCGCCAAGGGCCTGACGAGCGGTTACGTGCCGATGGGCGCGGTCGCGCTGTCGGAC CGGATCGCCGACGCGCTGATCGCGCACGGCGAGTTCAACCACGGGATGACGTACTCCGGGCATCCGGTCGCGGCGGCGGT GGCCATCGCGAATCTGAAGGTGCTGCGCGACGAGCGGATCGTCGAGCGCGTGAAGACCGATACCGGCCCCTACTTCCAGC AGCGGTTGCGCGAAACGTTCGCGAACCATCCGATCGTCGGCGACATCGCCGGCGCGGGGCTCGTCGCCGGCATCCAGCTC GCGCGCGAGCCGCGCACGCGCAAGCGCTTCGAGAACGGCGGCGAAGTCGGCACGATCTGCCGCGACTACTGCTTCAACGG CAACCTGATCATGCGCGCGACGGGCGACCGGATGCTGCTGTCGCCGCCGCTCGTGATCTCGAAACCGCAGATCGACGAGA TCGTCGAGAAGGCGAAGCGCGCGATCGATGCGACGGCGCAGCAACTGGGTCTTTCCTAA
Upstream 100 bases:
>100_bases AATACGAAGCGTTCTTCCGCGTGATCAGCTCGTGGGAACGCAAGCATCTGCTGCTGCACGTCTGAACGCGCATGCAGCCG CATCCATCCAGGAGGACACG
Downstream 100 bases:
>100_bases CGGCATTGCCAATCGGGCAGGCGGCGCGCGGGCGCCGCGCGCCCACCTTCATCATCAGGGGAACAACATGAGTGTGAGCC ATCTTCGTCATGCGGTCGCG
Product: putative aminotransferase
Products: L-glutamate; N2-succinylglutamic-semialdehyde [C]
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSYRPSNASAWIQPAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLWDSDGNRIIDGMAGLWCVNVG YGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQIAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKF VISRRNGYHGSTIAGATLGGMSYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVAAFI GEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLMTLAKGLTSGYVPMGAVALSD RIADALIAHGEFNHGMTYSGHPVAAAVAIANLKVLRDERIVERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQL AREPRTRKRFENGGEVGTICRDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAQQLGLS
Sequences:
>Translated_472_residues MSYRPSNASAWIQPAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLWDSDGNRIIDGMAGLWCVNVG YGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQIAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKF VISRRNGYHGSTIAGATLGGMSYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVAAFI GEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLMTLAKGLTSGYVPMGAVALSD RIADALIAHGEFNHGMTYSGHPVAAAVAIANLKVLRDERIVERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQL AREPRTRKRFENGGEVGTICRDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAQQLGLS >Mature_471_residues SYRPSNASAWIQPAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLWDSDGNRIIDGMAGLWCVNVGY GRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQIAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKFV ISRRNGYHGSTIAGATLGGMSYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVAAFIG EPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLMTLAKGLTSGYVPMGAVALSDR IADALIAHGEFNHGMTYSGHPVAAAVAIANLKVLRDERIVERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQLA REPRTRKRFENGGEVGTICRDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAQQLGLS
Specific function: Catalyzes The Transmination Of N(2)-Succinylornithine And Alpha-Ketoglutarate Into N(2)-Succinylglutamate Semialdehyde And Glutamate. Can Also Act As A Acetylornithine Aminotransferase. [C]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI24119277, Length=360, Percent_Identity=29.1666666666667, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI37574042, Length=371, Percent_Identity=30.188679245283, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI226442705, Length=368, Percent_Identity=30.4347826086957, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI13994255, Length=423, Percent_Identity=27.8959810874704, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI226442709, Length=324, Percent_Identity=31.1728395061728, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI4557809, Length=440, Percent_Identity=26.8181818181818, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI284507298, Length=228, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI188536080, Length=286, Percent_Identity=26.5734265734266, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI38679950, Length=286, Percent_Identity=26.5734265734266, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI38679946, Length=286, Percent_Identity=26.5734265734266, Blast_Score=85, Evalue=1e-16, Organism=Escherichia coli, GI1788044, Length=415, Percent_Identity=26.9879518072289, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1786991, Length=447, Percent_Identity=29.5302013422819, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1789759, Length=415, Percent_Identity=27.710843373494, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI145693181, Length=411, Percent_Identity=26.0340632603406, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1789016, Length=421, Percent_Identity=26.3657957244656, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1787560, Length=370, Percent_Identity=29.7297297297297, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1786349, Length=310, Percent_Identity=25.4838709677419, Blast_Score=79, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71992977, Length=427, Percent_Identity=28.5714285714286, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI25144271, Length=423, Percent_Identity=27.6595744680851, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI32564660, Length=449, Percent_Identity=28.9532293986637, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI25144274, Length=235, Percent_Identity=33.6170212765957, Blast_Score=134, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6323470, Length=460, Percent_Identity=27.1739130434783, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6324386, Length=366, Percent_Identity=30.8743169398907, Blast_Score=139, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6324432, Length=433, Percent_Identity=25.635103926097, Blast_Score=131, Evalue=2e-31, Organism=Drosophila melanogaster, GI161085790, Length=426, Percent_Identity=29.3427230046948, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI28574759, Length=430, Percent_Identity=29.7674418604651, Blast_Score=155, Evalue=7e-38, Organism=Drosophila melanogaster, GI21357415, Length=474, Percent_Identity=27.2151898734177, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI21356575, Length=371, Percent_Identity=29.9191374663073, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI281366494, Length=342, Percent_Identity=23.6842105263158, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24667139, Length=342, Percent_Identity=23.6842105263158, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24667143, Length=342, Percent_Identity=23.6842105263158, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: 2.6.1.- [C]
Molecular weight: Translated: 52043; Mature: 51912
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRPSNASAWIQPAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLW CCCCCCCCCEEECCCCCCHHCCHHHHHHHHHHHCCCCHHHCCHHCCCCEEEEEECCEEEE DSDGNRIIDGMAGLWCVNVGYGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQ CCCCCEEHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH IAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKFVISRRNGYHGSTIAGATLGG HCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCHHHHHH MSYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVAAFI HHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLM CCCCCCCCCEEECCCCCCHHHHHHHHHHCEEEEEHHHHCCCCCCCHHHHHHCCCCCHHHH TLAKGLTSGYVPMGAVALSDRIADALIAHGEFNHGMTYSGHPVAAAVAIANLKVLRDERI HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQLAREPRTRKRFENGGEVGTIC HHHHHCCCCHHHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHCCCHHHHHHHCCCCHHHHH RDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAQQLGLS HHHHCCCCEEEEECCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SYRPSNASAWIQPAAPAHRTSAEYRALDAAHHLHPFSDMGSLNRAGSRVIVKAEGVHLW CCCCCCCCEEECCCCCCHHCCHHHHHHHHHHHCCCCHHHCCHHCCCCEEEEEECCEEEE DSDGNRIIDGMAGLWCVNVGYGRDELIEAGSRQLRELPFYNTFFKTTHPPVIELSALLAQ CCCCCEEHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH IAPPAFNRFFYCNSGSEGNDTVLRIAHQYWRAQNRPQKKFVISRRNGYHGSTIAGATLGG HCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCHHHHHH MSYMHEQMPSKVEHIVHIDQPYYFGEAREGQTPEAFGLERARQLEAKILELGAQNVAAFI HHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GEPFQGAGGVIFPPSTYWPEIERICRQYDVLLVADEVIGGFGRTGEWFAHQHFGFAPDLM CCCCCCCCCEEECCCCCCHHHHHHHHHHCEEEEEHHHHCCCCCCCHHHHHHCCCCCHHHH TLAKGLTSGYVPMGAVALSDRIADALIAHGEFNHGMTYSGHPVAAAVAIANLKVLRDERI HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VERVKTDTGPYFQQRLRETFANHPIVGDIAGAGLVAGIQLAREPRTRKRFENGGEVGTIC HHHHHCCCCHHHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHCCCHHHHHHHCCCCHHHHH RDYCFNGNLIMRATGDRMLLSPPLVISKPQIDEIVEKAKRAIDATAQQLGLS HHHHCCCCEEEEECCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-alpha-acetylornithine; 2-oxoglutarate [C]
Specific reaction: N-alpha-acetylornithine + 2-oxoglutarate = N-acetylglutamate semialdehyde + L-glutamate N2-succinylornithine + 2-oxoglutarate = N2-succinylglutamic-semialdehyde + L-glutamate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]