Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

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The map label for this gene is yycE [H]

Identifier: 53721265

GI number: 53721265

Start: 314442

End: 314834

Strand: Reverse

Name: yycE [H]

Synonym: BPSS0230

Alternate gene names: 53721265

Gene position: 314834-314442 (Counterclockwise)

Preceding gene: 53721266

Following gene: 53721264

Centisome position: 9.92

GC content: 67.18

Gene sequence:

>393_bases
GTGATGAATCCTCCCGTTCTGCGCGTCGCCCGGCCGACCAACGATATCGACACGCTCGTGCGTTTCTACACGAAGGCGCT
CGGCTTCGACGTCGTCGCCCGCTTCGAGAATCACGAAGGCTTCGACGGCGCGATCGTCGGCCGCGCCGGCTATCCGTGGC
AAATCGAATTCACGCATCAGCACGGCGTGACGGTCGCGCGCGCACCGACCGCCGAGCATCTGCTCGTCTTTTATCTGCCC
GATCGCGGCGCGTGGACCGAGGCCGTCGCGCGAATGCGCGCGTACGGCGCGACGCCGTGCCGCTCGGAGAATCCGTACTG
GGACCGCGAAGGCGTGACGTTCGAGGACCCGGACGGCTACCGGATCGTCCTGCAGAACGCGCAGCCGGCCTGA

Upstream 100 bases:

>100_bases
CACGGCGACGTTGCGCAGGGGCGCCGCCGCGTTTTCGGCCTATGCTGAAAACGCAGCTGCGCAACACCCCGTTCGTCGAC
TCTTCGAAAACAGGAGTGCC

Downstream 100 bases:

>100_bases
ACGCTCGCACGCGGCCGCGCCCGGACCGCGCGCGGCGGGTGGTGCGCGCGCGATGCGGCGCACAGCCGCGCGCCGGCAGC
CGCCGCGTGCGGCGCGCGGC

Product: glyoxalase/bleomycin resistance protein/dioxygenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MMNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQHGVTVARAPTAEHLLVFYLP
DRGAWTEAVARMRAYGATPCRSENPYWDREGVTFEDPDGYRIVLQNAQPA

Sequences:

>Translated_130_residues
MMNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQHGVTVARAPTAEHLLVFYLP
DRGAWTEAVARMRAYGATPCRSENPYWDREGVTFEDPDGYRIVLQNAQPA
>Mature_130_residues
MMNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQHGVTVARAPTAEHLLVFYLP
DRGAWTEAVARMRAYGATPCRSENPYWDREGVTFEDPDGYRIVLQNAQPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14710; Mature: 14710

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQ
CCCCCEEEEECCCCHHHHHHHHHHHHHCHHEEEEECCCCCCCEEEECCCCCCEEEEEECC
HGVTVARAPTAEHLLVFYLPDRGAWTEAVARMRAYGATPCRSENPYWDREGVTFEDPDGY
CCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCE
RIVLQNAQPA
EEEEECCCCC
>Mature Secondary Structure
MMNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQ
CCCCCEEEEECCCCHHHHHHHHHHHHHCHHEEEEECCCCCCCEEEECCCCCCEEEEEECC
HGVTVARAPTAEHLLVFYLPDRGAWTEAVARMRAYGATPCRSENPYWDREGVTFEDPDGY
CCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCE
RIVLQNAQPA
EEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1312531; 7584024; 9384377 [H]