Click here to switch to the map view.

The map label for this gene is 53721161

Identifier: 53721161

GI number: 53721161

Start: 160633

End: 160926

Strand: Reverse

Name: 53721161

Synonym: BPSS0125

Alternate gene names: NA

Gene position: 160926-160633 (Counterclockwise)

Preceding gene: 53721170

Following gene: 53721159

Centisome position: 5.07

GC content: 55.44

Gene sequence:

>294_bases
ATGAACAGTTATCAGGAATACAAGCAACACGTCAAAACGCTTCAGGCAACGCTGGACCGGGAACGCAAGGCGATTTCGGC
CAAGGTGCTCCAGGAGATTCGCGAATGCATCGCGGAATTCGGCTTCACGCCTCAAGAGGTGTTTTCTTCGAAGAAGAAGC
GCGAACCGAAGTACTACGATCCGGTCAGCGGCTCGACATGGACCGGGCTCGGCCGAGAGCCGGAATGGATACGCGGAAAA
GACAGGAAGGCTTTCGAACTGTCGAGCCATCAGCGCGACGATCATTGCCGATGA

Upstream 100 bases:

>100_bases
TACAAATATGGGATCTTTAAATTACGCTTCAGCAATATCGAATCCATTCAATGACATACCTGGCCAATCGAATATCGCAT
TAGATCGACCAATTTCCGGC

Downstream 100 bases:

>100_bases
TATTGCGGGGCTGAACCGCCCGCGCCACGCGCGACGATCGGCACGGGACGCGATTGCACGGCGCGACGCATTCGGTCGGG
GGGCACACGTCAGGATGGCT

Product: regulatory protein

Products: NA

Alternate protein names: H-NS Histone Family Protein; Histone-Like Nucleoid-Structuring Protein H-NS; Regulatory Protein

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MNSYQEYKQHVKTLQATLDRERKAISAKVLQEIRECIAEFGFTPQEVFSSKKKREPKYYDPVSGSTWTGLGREPEWIRGK
DRKAFELSSHQRDDHCR

Sequences:

>Translated_97_residues
MNSYQEYKQHVKTLQATLDRERKAISAKVLQEIRECIAEFGFTPQEVFSSKKKREPKYYDPVSGSTWTGLGREPEWIRGK
DRKAFELSSHQRDDHCR
>Mature_97_residues
MNSYQEYKQHVKTLQATLDRERKAISAKVLQEIRECIAEFGFTPQEVFSSKKKREPKYYDPVSGSTWTGLGREPEWIRGK
DRKAFELSSHQRDDHCR

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11464; Mature: 11464

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYQEYKQHVKTLQATLDRERKAISAKVLQEIRECIAEFGFTPQEVFSSKKKREPKYYD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
PVSGSTWTGLGREPEWIRGKDRKAFELSSHQRDDHCR
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MNSYQEYKQHVKTLQATLDRERKAISAKVLQEIRECIAEFGFTPQEVFSSKKKREPKYYD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
PVSGSTWTGLGREPEWIRGKDRKAFELSSHQRDDHCR
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA