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The map label for this gene is rcsB [H]

Identifier: 53721155

GI number: 53721155

Start: 151956

End: 152618

Strand: Reverse

Name: rcsB [H]

Synonym: BPSS0119

Alternate gene names: 53721155

Gene position: 152618-151956 (Counterclockwise)

Preceding gene: 53721156

Following gene: 53721153

Centisome position: 4.81

GC content: 50.83

Gene sequence:

>663_bases
ATGACTGTTTTTTCCATCAAGGTCGTCATCGCGGACGACCATCCCGCTGTATTGACCGGCCTGCTCCACGCCCTGGCACC
CGTGAGCTCGATAGAAGTGGTGAGCGCTTGCAAAAACTCCACCGAACTGCTGACTGCGCTCAATGAATATCCTTGCGATG
TCGTCATTTCCGACTACAACATGCCGGACGACAACTTCGGAGATGGCATATCACTGTTCTCGTATATTCAGAGACGATAT
CCGAGCACCCGGTTGATTGCGCTGACGATGATCAGCAACCCGGCGATCATCCATAATCTGATATCACACGGTATTTCAAC
GGTTCTCAGCAAATCGGATGAGATCGGGCACATCATCGCGGCAATTCACGCGAGTTATGCGAAGGGCTCGTATCTTTCTC
CGACCATGGAAACGATCGTCAACAGCGGTCACGGCAAGTCGTCGGATGGAGAAGTACAGCTATCGCCAAGGGAAATAGAA
GTCGTACGCCTGTTTACATCCGGGTTGTCGGTCAATGAAATTGCCAACCGCCTGAAGCGAAGCAAGCAAACCATTAGCTC
TCAGAAAGCCAATGCCATGCGAAAGCTTGGAGTCAACAGCGACATCGATCTTCTCAAATATGCGCTGAAAGCAAAGCTTG
TCGAGGATACGAACAGCTATTGA

Upstream 100 bases:

>100_bases
ACAAACACACGCCTTCGCCAGAAACCACATCCCCGTCAAAATTTCAATTAATACATATTTTTTTCTTAAAACCTCTTTAA
CCATGTGACTTGCAACCAAG

Downstream 100 bases:

>100_bases
TTGGCTATCGCCTTCAAAAGCGGCATGACGGCAGCGTGTCCCGACGCTCTTCGCGAGAATTCGCAGTCGCAAATCATATC
GGCGCGCGTTGCATACTTGC

Product: two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTVFSIKVVIADDHPAVLTGLLHALAPVSSIEVVSACKNSTELLTALNEYPCDVVISDYNMPDDNFGDGISLFSYIQRRY
PSTRLIALTMISNPAIIHNLISHGISTVLSKSDEIGHIIAAIHASYAKGSYLSPTMETIVNSGHGKSSDGEVQLSPREIE
VVRLFTSGLSVNEIANRLKRSKQTISSQKANAMRKLGVNSDIDLLKYALKAKLVEDTNSY

Sequences:

>Translated_220_residues
MTVFSIKVVIADDHPAVLTGLLHALAPVSSIEVVSACKNSTELLTALNEYPCDVVISDYNMPDDNFGDGISLFSYIQRRY
PSTRLIALTMISNPAIIHNLISHGISTVLSKSDEIGHIIAAIHASYAKGSYLSPTMETIVNSGHGKSSDGEVQLSPREIE
VVRLFTSGLSVNEIANRLKRSKQTISSQKANAMRKLGVNSDIDLLKYALKAKLVEDTNSY
>Mature_219_residues
TVFSIKVVIADDHPAVLTGLLHALAPVSSIEVVSACKNSTELLTALNEYPCDVVISDYNMPDDNFGDGISLFSYIQRRYP
STRLIALTMISNPAIIHNLISHGISTVLSKSDEIGHIIAAIHASYAKGSYLSPTMETIVNSGHGKSSDGEVQLSPREIEV
VRLFTSGLSVNEIANRLKRSKQTISSQKANAMRKLGVNSDIDLLKYALKAKLVEDTNSY

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=208, Percent_Identity=41.3461538461538, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1790102, Length=201, Percent_Identity=30.3482587064677, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1786747, Length=208, Percent_Identity=26.4423076923077, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1788222, Length=211, Percent_Identity=25.1184834123223, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788712, Length=207, Percent_Identity=26.5700483091787, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788521, Length=200, Percent_Identity=28, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23892; Mature: 23760

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVFSIKVVIADDHPAVLTGLLHALAPVSSIEVVSACKNSTELLTALNEYPCDVVISDYN
CCEEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCC
MPDDNFGDGISLFSYIQRRYPSTRLIALTMISNPAIIHNLISHGISTVLSKSDEIGHIIA
CCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHH
AIHASYAKGSYLSPTMETIVNSGHGKSSDGEVQLSPREIEVVRLFTSGLSVNEIANRLKR
HHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCEEEEEHHHCCCCHHHHHHHHHH
SKQTISSQKANAMRKLGVNSDIDLLKYALKAKLVEDTNSY
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVFSIKVVIADDHPAVLTGLLHALAPVSSIEVVSACKNSTELLTALNEYPCDVVISDYN
CEEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCC
MPDDNFGDGISLFSYIQRRYPSTRLIALTMISNPAIIHNLISHGISTVLSKSDEIGHIIA
CCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHH
AIHASYAKGSYLSPTMETIVNSGHGKSSDGEVQLSPREIEVVRLFTSGLSVNEIANRLKR
HHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCEEEEEHHHCCCCHHHHHHHHHH
SKQTISSQKANAMRKLGVNSDIDLLKYALKAKLVEDTNSY
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]