| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721145
Identifier: 53721145
GI number: 53721145
Start: 136345
End: 137373
Strand: Reverse
Name: 53721145
Synonym: BPSS0109
Alternate gene names: NA
Gene position: 137373-136345 (Counterclockwise)
Preceding gene: 53721146
Following gene: 53721144
Centisome position: 4.33
GC content: 58.31
Gene sequence:
>1029_bases ATGAAGAAAAAATTCTCAAGATTCCTTGCGGCCCTCGTCTTGCTCGCAGCGACCGTCGATGCGCTTGCCGCCGGCTGCAA CATGCTGACCGCGGAGAATATCGCGTGGCTGACCGAGCAAGGCAAGATCGCGCGCGCTCACAGTTCCTTTCCCATATCCT TCTCTTCCGGAATGGTCGATGTCGACCCGAACCTCGAGATCGGAGGCTTGATAGCAGAGGCAAAAAGCATCCCAAGCGAA GAACTGCACTTCATTTGGTGCAGCGCGCCCTCCGGGAATGTTCACTTTGCGCTCAATTCGTCCCCGCTGCCGTCGGAACT CGGAAATTCGATCTATGAAACCGGTGTGCCCGGCGTCGGATTCCGAATCACTCAGGTTCGCCAGAGCGGCTCGATAGGGG CGATTCCTCGCGATACGCCGTGGATCGAAGAAAAGCCCGGCCAGGACAGCTCTCTGAATTTCGGCGCGGGAACCGTGTTC CGTATCGAGCTGATCAAGACCAGCGAAGCGTTGCCGAGCGAATCGACCATATCCCTTGGCAACCTCAGTCGCGTATACGG TGACGACAACAAAACGGTCGTCGATTTCAATGCCGGCAGCGTCAAGTTGCGCGTGCTGCCGATCTGCCATGTCGATCAAC AGGAAAAAAATGTAGATTTCGGCCAATTCGGCCCGAAAGACGTTTCCTTCGATTCCGGCCCCACCAAGGACGTCAAGTTT GACGTCCAGTGTTCGGGCCCGACGCCCCCCGTCTCCATCACGGCGACTTTGGCCGCGACGCCGGATAGTCACGATCAAAG CCTGATCGCGAACGCCGGCGATGCCATGAACCTTGCCATCCGATTGCGCGATGCAAGTACGCAACAGGTTCTCAGGCCCA ACGATCCCACCAGCGAAATCAAGGTCGAGCCCGGCGGCGCAATGGAGCACGGATTCGCACTGGAGGCGACTGTCCTGCGT GTCGGCACGGCGCCGCCCACGGCGGGCACGATCGACGCAACCTCAATCATCACGCTAACCATTTTGTGA
Upstream 100 bases:
>100_bases GATTCCCGCCGAACTGCTCGCGCAATGGGATGCGATCGACGTCTAGATCCGCCATTGCCCGCGCAACGCTCTCCGTTCCA CCGACCATCCCACCTATCGA
Downstream 100 bases:
>100_bases CGTCGTCGGCACGACGGCGTTGGTTCGACACCATGAATCACTCGATTTTTGTTCAAATCGCCAGTTATCGCGATCCGCAA TTGATTCCGACGCTCGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Fimbrial Protein Subfamily Protein
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKKKFSRFLAALVLLAATVDALAAGCNMLTAENIAWLTEQGKIARAHSSFPISFSSGMVDVDPNLEIGGLIAEAKSIPSE ELHFIWCSAPSGNVHFALNSSPLPSELGNSIYETGVPGVGFRITQVRQSGSIGAIPRDTPWIEEKPGQDSSLNFGAGTVF RIELIKTSEALPSESTISLGNLSRVYGDDNKTVVDFNAGSVKLRVLPICHVDQQEKNVDFGQFGPKDVSFDSGPTKDVKF DVQCSGPTPPVSITATLAATPDSHDQSLIANAGDAMNLAIRLRDASTQQVLRPNDPTSEIKVEPGGAMEHGFALEATVLR VGTAPPTAGTIDATSIITLTIL
Sequences:
>Translated_342_residues MKKKFSRFLAALVLLAATVDALAAGCNMLTAENIAWLTEQGKIARAHSSFPISFSSGMVDVDPNLEIGGLIAEAKSIPSE ELHFIWCSAPSGNVHFALNSSPLPSELGNSIYETGVPGVGFRITQVRQSGSIGAIPRDTPWIEEKPGQDSSLNFGAGTVF RIELIKTSEALPSESTISLGNLSRVYGDDNKTVVDFNAGSVKLRVLPICHVDQQEKNVDFGQFGPKDVSFDSGPTKDVKF DVQCSGPTPPVSITATLAATPDSHDQSLIANAGDAMNLAIRLRDASTQQVLRPNDPTSEIKVEPGGAMEHGFALEATVLR VGTAPPTAGTIDATSIITLTIL >Mature_342_residues MKKKFSRFLAALVLLAATVDALAAGCNMLTAENIAWLTEQGKIARAHSSFPISFSSGMVDVDPNLEIGGLIAEAKSIPSE ELHFIWCSAPSGNVHFALNSSPLPSELGNSIYETGVPGVGFRITQVRQSGSIGAIPRDTPWIEEKPGQDSSLNFGAGTVF RIELIKTSEALPSESTISLGNLSRVYGDDNKTVVDFNAGSVKLRVLPICHVDQQEKNVDFGQFGPKDVSFDSGPTKDVKF DVQCSGPTPPVSITATLAATPDSHDQSLIANAGDAMNLAIRLRDASTQQVLRPNDPTSEIKVEPGGAMEHGFALEATVLR VGTAPPTAGTIDATSIITLTIL
Specific function: Unknown
COG id: COG3539
COG function: function code NU; P pilus assembly protein, pilin FimA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36157; Mature: 36157
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKFSRFLAALVLLAATVDALAAGCNMLTAENIAWLTEQGKIARAHSSFPISFSSGMVD CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCCCEEECCCCCCEEECCCEEE VDPNLEIGGLIAEAKSIPSEELHFIWCSAPSGNVHFALNSSPLPSELGNSIYETGVPGVG ECCCCEECEEEEHHHCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHCCHHHHCCCCCCC FRITQVRQSGSIGAIPRDTPWIEEKPGQDSSLNFGAGTVFRIELIKTSEALPSESTISLG EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEEECCCCCCCCCEEECC NLSRVYGDDNKTVVDFNAGSVKLRVLPICHVDQQEKNVDFGQFGPKDVSFDSGPTKDVKF CCCEEECCCCCEEEEECCCEEEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCEEE DVQCSGPTPPVSITATLAATPDSHDQSLIANAGDAMNLAIRLRDASTQQVLRPNDPTSEI EEEECCCCCCEEEEEEEEECCCCCCCHHHHCCCCEEEEEEEEECCCCHHHCCCCCCCCEE KVEPGGAMEHGFALEATVLRVGTAPPTAGTIDATSIITLTIL EECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MKKKFSRFLAALVLLAATVDALAAGCNMLTAENIAWLTEQGKIARAHSSFPISFSSGMVD CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCCCEEECCCCCCEEECCCEEE VDPNLEIGGLIAEAKSIPSEELHFIWCSAPSGNVHFALNSSPLPSELGNSIYETGVPGVG ECCCCEECEEEEHHHCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHCCHHHHCCCCCCC FRITQVRQSGSIGAIPRDTPWIEEKPGQDSSLNFGAGTVFRIELIKTSEALPSESTISLG EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEEECCCCCCCCCEEECC NLSRVYGDDNKTVVDFNAGSVKLRVLPICHVDQQEKNVDFGQFGPKDVSFDSGPTKDVKF CCCEEECCCCCEEEEECCCEEEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCEEE DVQCSGPTPPVSITATLAATPDSHDQSLIANAGDAMNLAIRLRDASTQQVLRPNDPTSEI EEEECCCCCCEEEEEEEEECCCCCCCHHHHCCCCEEEEEEEEECCCCHHHCCCCCCCCEE KVEPGGAMEHGFALEATVLRVGTAPPTAGTIDATSIITLTIL EECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA