| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721144
Identifier: 53721144
GI number: 53721144
Start: 134954
End: 136312
Strand: Reverse
Name: 53721144
Synonym: BPSS0108
Alternate gene names: NA
Gene position: 136312-134954 (Counterclockwise)
Preceding gene: 53721145
Following gene: 53721128
Centisome position: 4.3
GC content: 60.63
Gene sequence:
>1359_bases ATGAATCACTCGATTTTTGTTCAAATCGCCAGTTATCGCGATCCGCAATTGATTCCGACGCTCGTCGACCTAATCGACCG AGCGTCCCGCCCCGAGGCGCTTCGCATCGTCGTATGTCGACAGCACGCGTTGGAAGACACGATCGGAGCGTTCTTTGCTC ACGGCTTTTCACGATGGCGCGCGGATACCACCGGAGAATTCGCGGTTCACACGCTCGCCTTCCGCGGCGCATCGATCGAA ATGATCGATGTTCCATATCAGCAATCCCGTGGCGCGTGCTGGGCGCGCAATCTCATCCAGCAGCGTTACGGAAACGAGCG GTATACCCTTCAGCTTGATTCCCACCATCGCTTCATCGATGGATGGGACCAGCAGATGGTCGGGATGCTCGAGTCGCTCA GGACGTTCAGCGCAAAACCGCTGATCACCGCATACCTGCCCGGCTTCACGCCAGGATGTGAACGTCGCGCCCTCAGCCAT ACGCCGCTTGCAATGACGTTTTTCCGGTTTTCTCCGGAAGGCGTCGTGTTGTTCCGCGCTCGCGACATTGCGGATTGGCA GGCGATGGCGCATCCGATACCGGCGCGATTCTACAGCGCTCATTTCGCGTTCGCGGACGGCCATTTTGCGCAAACGGTAC GGCACGACCCCCATTTTTTCTTCCACGGCGAGGAAATTTCCCTAGCCGTCCGTGCTTTCACGCACGGCTACGATCTCTAT CATCCCCATCGCGCCATCGCGTGGCATGAATACACGCGTCGCGGACGACCGAAGATCTGGGACGATCACACCGTCGAGGC CAAAGCAAACGGCGTGGTCTCGCGGCACTGGGGGGAACTCGATCAGCGCTCGCACGAGCGTAACCGCGCGCTGCTCGGGA TAGACGGCGCGTCATGCACCGGCATCGATTTCGCATCGTATGGCCTGGGTACGGAGCGAACCCTGGCCGAATACGAGCGC TACGTCGGCCTCAGCTTCGCCCATCGCGGCGTGCAGCCAGCCCTGATCGACGGGGCGCCGCCCGAACCCGCCGCGCGCGT TCGACAATCGGACGACGAATGGAAATCGACGCTCAAACGCGCAAACGAAGTGCGGGTCTGGGTTCACCAAAACCGGTTTT CGGAAGTGTTGGCGCCGCTTCACAGTTGCCACATGACCGTTCACGATGCCGGACAAACCGTCCTCCACGCCGCGACCGTC GATGCCGACGAATTTCGTCGGCATCATTCGGGCGAGTGGTTCGGCTACAGCCTAGACTTCTTGTCCGAGCTGGATCAGCG CCCCGTCGACTACGTCGTCGAGCTTTGCGACGAGGCCGGCCGCCGGCTCGCCGAGATCGAATGTTCGCTTGACGCTTGA
Upstream 100 bases:
>100_bases TCGGCACGGCGCCGCCCACGGCGGGCACGATCGACGCAACCTCAATCATCACGCTAACCATTTTGTGACGTCGTCGGCAC GACGGCGTTGGTTCGACACC
Downstream 100 bases:
>100_bases GCCCAGGCGTTTCCCGGCGCGCGGCCGTGCAAGCGTTACCGCACGCCCCGTCGGATTACAAGCGGTTTGCGGATTCGAGA CGTAGCGATACGGGCTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MNHSIFVQIASYRDPQLIPTLVDLIDRASRPEALRIVVCRQHALEDTIGAFFAHGFSRWRADTTGEFAVHTLAFRGASIE MIDVPYQQSRGACWARNLIQQRYGNERYTLQLDSHHRFIDGWDQQMVGMLESLRTFSAKPLITAYLPGFTPGCERRALSH TPLAMTFFRFSPEGVVLFRARDIADWQAMAHPIPARFYSAHFAFADGHFAQTVRHDPHFFFHGEEISLAVRAFTHGYDLY HPHRAIAWHEYTRRGRPKIWDDHTVEAKANGVVSRHWGELDQRSHERNRALLGIDGASCTGIDFASYGLGTERTLAEYER YVGLSFAHRGVQPALIDGAPPEPAARVRQSDDEWKSTLKRANEVRVWVHQNRFSEVLAPLHSCHMTVHDAGQTVLHAATV DADEFRRHHSGEWFGYSLDFLSELDQRPVDYVVELCDEAGRRLAEIECSLDA
Sequences:
>Translated_452_residues MNHSIFVQIASYRDPQLIPTLVDLIDRASRPEALRIVVCRQHALEDTIGAFFAHGFSRWRADTTGEFAVHTLAFRGASIE MIDVPYQQSRGACWARNLIQQRYGNERYTLQLDSHHRFIDGWDQQMVGMLESLRTFSAKPLITAYLPGFTPGCERRALSH TPLAMTFFRFSPEGVVLFRARDIADWQAMAHPIPARFYSAHFAFADGHFAQTVRHDPHFFFHGEEISLAVRAFTHGYDLY HPHRAIAWHEYTRRGRPKIWDDHTVEAKANGVVSRHWGELDQRSHERNRALLGIDGASCTGIDFASYGLGTERTLAEYER YVGLSFAHRGVQPALIDGAPPEPAARVRQSDDEWKSTLKRANEVRVWVHQNRFSEVLAPLHSCHMTVHDAGQTVLHAATV DADEFRRHHSGEWFGYSLDFLSELDQRPVDYVVELCDEAGRRLAEIECSLDA >Mature_452_residues MNHSIFVQIASYRDPQLIPTLVDLIDRASRPEALRIVVCRQHALEDTIGAFFAHGFSRWRADTTGEFAVHTLAFRGASIE MIDVPYQQSRGACWARNLIQQRYGNERYTLQLDSHHRFIDGWDQQMVGMLESLRTFSAKPLITAYLPGFTPGCERRALSH TPLAMTFFRFSPEGVVLFRARDIADWQAMAHPIPARFYSAHFAFADGHFAQTVRHDPHFFFHGEEISLAVRAFTHGYDLY HPHRAIAWHEYTRRGRPKIWDDHTVEAKANGVVSRHWGELDQRSHERNRALLGIDGASCTGIDFASYGLGTERTLAEYER YVGLSFAHRGVQPALIDGAPPEPAARVRQSDDEWKSTLKRANEVRVWVHQNRFSEVLAPLHSCHMTVHDAGQTVLHAATV DADEFRRHHSGEWFGYSLDFLSELDQRPVDYVVELCDEAGRRLAEIECSLDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51617; Mature: 51617
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHSIFVQIASYRDPQLIPTLVDLIDRASRPEALRIVVCRQHALEDTIGAFFAHGFSRWR CCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC ADTTGEFAVHTLAFRGASIEMIDVPYQQSRGACWARNLIQQRYGNERYTLQLDSHHRFID CCCCCCCEEEEEEECCCEEEEEECCHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC GWDQQMVGMLESLRTFSAKPLITAYLPGFTPGCERRALSHTPLAMTFFRFSPEGVVLFRA CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEEE RDIADWQAMAHPIPARFYSAHFAFADGHFAQTVRHDPHFFFHGEEISLAVRAFTHGYDLY CCCHHHHHHHCCCCHHHHHHEEEECCCHHHHHHCCCCCEEEECCEEEEEEEHHHCCCCCC HPHRAIAWHEYTRRGRPKIWDDHTVEAKANGVVSRHWGELDQRSHERNRALLGIDGASCT CCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHCCEEEEECCCCCC GIDFASYGLGTERTLAEYERYVGLSFAHRGVQPALIDGAPPEPAARVRQSDDEWKSTLKR CCCHHHCCCCCHHHHHHHHHHHCHHHHHCCCCCEEECCCCCCHHHHHCCCCHHHHHHHHC ANEVRVWVHQNRFSEVLAPLHSCHMTVHDAGQTVLHAATVDADEFRRHHSGEWFGYSLDF CCCEEEEEECCHHHHHHHHHHHHEEEEECCCCEEEEEEECCHHHHHHHCCCCEEEEEHHH LSELDQRPVDYVVELCDEAGRRLAEIECSLDA HHHHCCCHHHHHHHHHHHHCCEEEEEEEECCC >Mature Secondary Structure MNHSIFVQIASYRDPQLIPTLVDLIDRASRPEALRIVVCRQHALEDTIGAFFAHGFSRWR CCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC ADTTGEFAVHTLAFRGASIEMIDVPYQQSRGACWARNLIQQRYGNERYTLQLDSHHRFID CCCCCCCEEEEEEECCCEEEEEECCHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC GWDQQMVGMLESLRTFSAKPLITAYLPGFTPGCERRALSHTPLAMTFFRFSPEGVVLFRA CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEEE RDIADWQAMAHPIPARFYSAHFAFADGHFAQTVRHDPHFFFHGEEISLAVRAFTHGYDLY CCCHHHHHHHCCCCHHHHHHEEEECCCHHHHHHCCCCCEEEECCEEEEEEEHHHCCCCCC HPHRAIAWHEYTRRGRPKIWDDHTVEAKANGVVSRHWGELDQRSHERNRALLGIDGASCT CCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHCCEEEEECCCCCC GIDFASYGLGTERTLAEYERYVGLSFAHRGVQPALIDGAPPEPAARVRQSDDEWKSTLKR CCCHHHCCCCCHHHHHHHHHHHCHHHHHCCCCCEEECCCCCCHHHHHCCCCHHHHHHHHC ANEVRVWVHQNRFSEVLAPLHSCHMTVHDAGQTVLHAATVDADEFRRHHSGEWFGYSLDF CCCEEEEEECCHHHHHHHHHHHHEEEEECCCCEEEEEEECCHHHHHHHCCCCEEEEEHHH LSELDQRPVDYVVELCDEAGRRLAEIECSLDA HHHHCCCHHHHHHHHHHHHCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA