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The map label for this gene is gidB [H]

Identifier: 53721014

GI number: 53721014

Start: 4044790

End: 4045482

Strand: Reverse

Name: gidB [H]

Synonym: BPSL3407

Alternate gene names: 53721014

Gene position: 4045482-4044790 (Counterclockwise)

Preceding gene: 53721015

Following gene: 53721013

Centisome position: 99.29

GC content: 63.78

Gene sequence:

>693_bases
GTGCAACAGCGTCGCCGCCCCCCGATTGCCAGCCGGGAAACGCTGCAAGCATTGCTGTCGGAGGGTGCGCAAGCGCTGGG
CGTCGCGTTGAGCGATGCGCAACGCGGCGCACTGCTTGATTACGTCGCACTGCTCGCCAAGTGGAATGCGGTTTACAACC
TCACCGCGATCCGCGATCCGCGGCAAATGCTGATTCAACACATCCTCGATTCGCTATCGATCGTCCCGCATCTCGGGGCG
CACGGCGCGGCGGCGGCTGCGCTCGATGTCGGTTCCGGAGGCGGTTTGCCGGGCGTCGTACTCGCGATCGCGCTGCCTGG
CTGGCGGGTCACGTTGAACGACATCGTCCATAAGAAATCCGCATTCCAGAACCAGGCGAAGGCAGAGTTGAAGCTCGGCA
ATCTGTCCGTCGTGACGGGGCGCGTCGAAACGCTGCGCCCGGGCGCCGACGTGCCGGCGAAATTCGATGTGATCGTGTCG
CGCGCATTCGCGGATCTGGCGGACTTCGTTACACTTGCCCGGCACCTCGTTGCGCCGGGCGGGTCGATCTGGGCGATGAA
GGGCGTGCGTCCCGATGAAGAAATCGGTCGCTTGCCCGATGGCGCGCGCGTCAAACAGATGATCCGCCTGACGGTCCCGT
CGCTCGATGCGGAACGGCACTTGATCGAAGTCGAGCTCGACGAAGCAATTTAA

Upstream 100 bases:

>100_bases
TGGTGCATCTGAAGAAGCGCGGGCTGGGCCGGCGAAAGGGCGCGGACAGTGTACCGGGCGCCGACGTGCAAGCCGACAAC
ACGGCGGCGCAACAATGACG

Downstream 100 bases:

>100_bases
CCGGTGCGCCGCAGGGCGCCCGGACCATTTGAAGAGAAGGAATACACCAACGATGGCAAAGATCTTCTGCGTGGCGAACC
AGAAGGGCGGCGTAGGCAAG

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MQQRRRPPIASRETLQALLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGA
HGAAAAALDVGSGGGLPGVVLAIALPGWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLRPGADVPAKFDVIVS
RAFADLADFVTLARHLVAPGGSIWAMKGVRPDEEIGRLPDGARVKQMIRLTVPSLDAERHLIEVELDEAI

Sequences:

>Translated_230_residues
MQQRRRPPIASRETLQALLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGA
HGAAAAALDVGSGGGLPGVVLAIALPGWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLRPGADVPAKFDVIVS
RAFADLADFVTLARHLVAPGGSIWAMKGVRPDEEIGRLPDGARVKQMIRLTVPSLDAERHLIEVELDEAI
>Mature_230_residues
MQQRRRPPIASRETLQALLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGA
HGAAAAALDVGSGGGLPGVVLAIALPGWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLRPGADVPAKFDVIVS
RAFADLADFVTLARHLVAPGGSIWAMKGVRPDEEIGRLPDGARVKQMIRLTVPSLDAERHLIEVELDEAI

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=201, Percent_Identity=42.2885572139304, Blast_Score=166, Evalue=8e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: =2.1.1.170 [H]

Molecular weight: Translated: 24596; Mature: 24596

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQRRRPPIASRETLQALLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDP
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCH
RQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVVLAIALPGWRVTLNDIVHKKS
HHHHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCCHHHHHHEECCCCEEEHHHHHHHHH
AFQNQAKAELKLGNLSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLVAPG
HHHHHHHHEEEECCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GSIWAMKGVRPDEEIGRLPDGARVKQMIRLTVPSLDAERHLIEVELDEAI
CCEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MQQRRRPPIASRETLQALLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDP
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCH
RQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVVLAIALPGWRVTLNDIVHKKS
HHHHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCCHHHHHHEECCCCEEEHHHHHHHHH
AFQNQAKAELKLGNLSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLVAPG
HHHHHHHHEEEECCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GSIWAMKGVRPDEEIGRLPDGARVKQMIRLTVPSLDAERHLIEVELDEAI
CCEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA