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The map label for this gene is gbpA [H]

Identifier: 53720950

GI number: 53720950

Start: 3962264

End: 3962965

Strand: Reverse

Name: gbpA [H]

Synonym: BPSL3340

Alternate gene names: 53720950

Gene position: 3962965-3962264 (Counterclockwise)

Preceding gene: 53720951

Following gene: 53720949

Centisome position: 97.26

GC content: 61.82

Gene sequence:

>702_bases
ATGGCTTCCAGCGTTGGTCTTGCCGATGTTCGGCACGTTTGCAGCCAAGGAGGCAAAATGAGCACTACCGATTCGAGAAG
CGCAACGAAGTCTTCGTCCATTTCTCCGCGGCATGGCCGCGTCATCACGCCCGAGTCGCGCGCCGTGTATCTCTACGAAG
CAGGAAGGCTCGATTTCGGGCAGGTCAATGAGCTGGAGGGCGGCAAATTCTTTCCCGCGACCCAAAGCGGGCTCAGAGAT
CCGGACGCGCCGGACGACGTCGCCAACGGCATGCCGCCGCGCGACGGCGAAATCGCGAGCGGCGGGCGCACGGCGGATGC
CCGCGCGCAACTCAACGAACCCGATTCCGTTGCGCATTGGCAGAAACATGCGGTGCGATCGGGGCAATCGCTGCAAATCT
CGTGGTCGTATTCGATGCCGCACAAGACGCGGCGCTGGACTTACTGGATCACGAAGCCGGGATGGGACACCCAGGCGCGG
CTTGCGCGCGCGCATTTCGAGCCCGATCCGCTGAAGGTCTACCTGAACACGTATCAGCCGTACTGGGGGCCGGATGCGGA
CAAGGAGTTGATCCCCCAGGGCGAGACGATTCACGAATTCAATCTGCCGACTCGCACCGGCTATCACGTACTGCTCGCGG
TGTGGGACGTCGCCGATACCGCCAACGCGTTCTATCAGGTGATCGATCTGAATTTCGCGTGA

Upstream 100 bases:

>100_bases
TCTTTAAGGTGAAATATAAAACCAGTGAAGGCCGGTTCACACTAAATTTATTGGCTTCATCTCCACCAAGCACCTAGCAT
TAATTTCACTGGTATCGCGA

Downstream 100 bases:

>100_bases
GCCGGCTGGTCATTTCCGCGTGTCGTCGCGGTCTGCTGCACGAATAAGGCATTGCGGCCATCGGATTCGCGCTCGTTCGA
TGGCCGTCCCGCACCGCGAT

Product: putative chitin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MASSVGLADVRHVCSQGGKMSTTDSRSATKSSSISPRHGRVITPESRAVYLYEAGRLDFGQVNELEGGKFFPATQSGLRD
PDAPDDVANGMPPRDGEIASGGRTADARAQLNEPDSVAHWQKHAVRSGQSLQISWSYSMPHKTRRWTYWITKPGWDTQAR
LARAHFEPDPLKVYLNTYQPYWGPDADKELIPQGETIHEFNLPTRTGYHVLLAVWDVADTANAFYQVIDLNFA

Sequences:

>Translated_233_residues
MASSVGLADVRHVCSQGGKMSTTDSRSATKSSSISPRHGRVITPESRAVYLYEAGRLDFGQVNELEGGKFFPATQSGLRD
PDAPDDVANGMPPRDGEIASGGRTADARAQLNEPDSVAHWQKHAVRSGQSLQISWSYSMPHKTRRWTYWITKPGWDTQAR
LARAHFEPDPLKVYLNTYQPYWGPDADKELIPQGETIHEFNLPTRTGYHVLLAVWDVADTANAFYQVIDLNFA
>Mature_232_residues
ASSVGLADVRHVCSQGGKMSTTDSRSATKSSSISPRHGRVITPESRAVYLYEAGRLDFGQVNELEGGKFFPATQSGLRDP
DAPDDVANGMPPRDGEIASGGRTADARAQLNEPDSVAHWQKHAVRSGQSLQISWSYSMPHKTRRWTYWITKPGWDTQARL
ARAHFEPDPLKVYLNTYQPYWGPDADKELIPQGETIHEFNLPTRTGYHVLLAVWDVADTANAFYQVIDLNFA

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 25903; Mature: 25772

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSVGLADVRHVCSQGGKMSTTDSRSATKSSSISPRHGRVITPESRAVYLYEAGRLDFG
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCC
QVNELEGGKFFPATQSGLRDPDAPDDVANGMPPRDGEIASGGRTADARAQLNEPDSVAHW
CCCCCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
QKHAVRSGQSLQISWSYSMPHKTRRWTYWITKPGWDTQARLARAHFEPDPLKVYLNTYQP
HHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCC
YWGPDADKELIPQGETIHEFNLPTRTGYHVLLAVWDVADTANAFYQVIDLNFA
CCCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEEECHHHHHHHEEEEEEECCC
>Mature Secondary Structure 
ASSVGLADVRHVCSQGGKMSTTDSRSATKSSSISPRHGRVITPESRAVYLYEAGRLDFG
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCC
QVNELEGGKFFPATQSGLRDPDAPDDVANGMPPRDGEIASGGRTADARAQLNEPDSVAHW
CCCCCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
QKHAVRSGQSLQISWSYSMPHKTRRWTYWITKPGWDTQARLARAHFEPDPLKVYLNTYQP
HHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCC
YWGPDADKELIPQGETIHEFNLPTRTGYHVLLAVWDVADTANAFYQVIDLNFA
CCCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEEECHHHHHHHEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]