Click here to switch to the map view.

The map label for this gene is traJ [H]

Identifier: 53720875

GI number: 53720875

Start: 3882108

End: 3882494

Strand: Reverse

Name: traJ [H]

Synonym: BPSL3265

Alternate gene names: 53720875

Gene position: 3882494-3882108 (Counterclockwise)

Preceding gene: 53720876

Following gene: 53720874

Centisome position: 95.29

GC content: 59.69

Gene sequence:

>387_bases
ATGGGAACAACTGTGGAAGTCAAAGCGAAGAACGTGACCCGAAAGGGTTGCTCGCCGATCAAGGTCTACTGCTTGCCGGA
AGAACGAGCCGAAATCGAGGCGATGGCGAATGCAAGTGGGCACAGCGCATCGACCTATCTGCGCTTGGTCGGGATGGGCT
ATCGCATCCAAGGCGTGATCGACGCAGAGCAGGTGCGCGAGATGGTTCGCGTGAATGGCGACCTGGGTCGTCTCGGGGGG
CTCTTGAAACTCTGGCTGACGAACGATGCCCGCGTGGCAGGGTTCACTCCGGCCACGATCCGTGCGTTGCTGTCCAAGAT
CGAAACGATGCGGGATGAGCTGAGCCGCATCATGGAAAAAGTAGTGCGGCCGAGGGCCGAGCCATGA

Upstream 100 bases:

>100_bases
CGGCAAGCCGGCGTTCCTACTTCACTTTCCTTATTCGCACCTTCGGTGCTCAACGGAAATCCTGCTCTGCGAGGCAAGTC
GGCAGAGCCGGCAACGAGTA

Downstream 100 bases:

>100_bases
TTGCCAAGCACGTTCCCATGCGCTCGCTTGGCAAGAGTGATTTCGCGGGCTTAGTGAAGTACATCACGGCAGACCAGGCC
AAAGAGCACCGTATCGGGGA

Product: conjugal transfer relaxosome component TraJ

Products: NA

Alternate protein names: Relaxosome protein [H]

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MGTTVEVKAKNVTRKGCSPIKVYCLPEERAEIEAMANASGHSASTYLRLVGMGYRIQGVIDAEQVREMVRVNGDLGRLGG
LLKLWLTNDARVAGFTPATIRALLSKIETMRDELSRIMEKVVRPRAEP

Sequences:

>Translated_128_residues
MGTTVEVKAKNVTRKGCSPIKVYCLPEERAEIEAMANASGHSASTYLRLVGMGYRIQGVIDAEQVREMVRVNGDLGRLGG
LLKLWLTNDARVAGFTPATIRALLSKIETMRDELSRIMEKVVRPRAEP
>Mature_127_residues
GTTVEVKAKNVTRKGCSPIKVYCLPEERAEIEAMANASGHSASTYLRLVGMGYRIQGVIDAEQVREMVRVNGDLGRLGGL
LKLWLTNDARVAGFTPATIRALLSKIETMRDELSRIMEKVVRPRAEP

Specific function: Transfer of plasmid RP4 during bacterial conjugation requires the plasmid-encoded traJ protein, which binds to a 19- base pair invert sequence repetition within the transfer origin. TraJ protein is bound to only one side of the DNA helix. This nucleoprote

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14130; Mature: 13999

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTTVEVKAKNVTRKGCSPIKVYCLPEERAEIEAMANASGHSASTYLRLVGMGYRIQGVI
CCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEE
DAEQVREMVRVNGDLGRLGGLLKLWLTNDARVAGFTPATIRALLSKIETMRDELSRIMEK
CHHHHHHHHHCCCCHHHHHHHEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVRPRAEP
HHCCCCCC
>Mature Secondary Structure 
GTTVEVKAKNVTRKGCSPIKVYCLPEERAEIEAMANASGHSASTYLRLVGMGYRIQGVI
CCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEE
DAEQVREMVRVNGDLGRLGGLLKLWLTNDARVAGFTPATIRALLSKIETMRDELSRIMEK
CHHHHHHHHHCCCCHHHHHHHEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVRPRAEP
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2663846; 1665997; 2538813; 2168553 [H]