| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53720677
Identifier: 53720677
GI number: 53720677
Start: 3661707
End: 3662330
Strand: Reverse
Name: 53720677
Synonym: BPSL3068
Alternate gene names: NA
Gene position: 3662330-3661707 (Counterclockwise)
Preceding gene: 53720678
Following gene: 53720675
Centisome position: 89.88
GC content: 67.63
Gene sequence:
>624_bases ATGACCGTCAAGGCAGTCGTATTCGATTTCGGCGGCGTGCTGATCGACTGGAGCCCCGAGTATCTGTACCGGAAACTGAT TCCCGATGAAGCCGAGCGGCGCTGGTTTCTCACGCACGTATGCGGAATGGACTGGGTGGTGAGGCAGGACGGCGGCCAGA CGATCGAGGAGGGGACCGCCGAGCGTATCGCGCTGTTTCCCGAGCATGAGGCGCTGATCCGCGCGTTCTACGCGCGGTGG CACGAGATGATCGGCGGCGAGCTCGCGGACGGCGCCGCGCTCGTCGACGCGCTCGATGCGCGCGGTGTGCCGCTCTTCGG GCTCACGAACTGGTCCGCGCAGACGTTTCCGTATGCGTGGGAGAACTTCCCCGTGCTGCGGCGTTTCAGGGACATCGTCG TGTCCGGCCGCGTGAAGCTCGCGAAGCCCGATCCGGCGATCTACCGCGAGATGCACGCGCGGATCGAACCGCATCTGCCG GGCATCGCGCCGCACGAGCTCGTTTTCATCGACGACAACGCGAAGAACGCGGCGGCCGCGGCCGCGCTCGGCTGGCACGG GATTCATCACACGAGCGCCGCGGCGACGCGGGCGCGGCTGCGCGAGCTGGGCGCGCTTGGCTGA
Upstream 100 bases:
>100_bases AAATCGTCGCGCATCACAATTTCATCTGGAGCCACTGTTCGTTCTCGGGCAACGGCGTTGCGCCGCGGCCGCTCGACGAG GTGATCGCCGCGGAGTTCGC
Downstream 100 bases:
>100_bases CGGCGCGGGTGATGCGCGGCGATGCGGCGGCGCGGCGCGGCGCGCCGTCGCCGCGAGCCCGTTCGCGGGGACTTGCGCCG GGCGGTAAGGCGCCGGTGGC
Product: putative hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Hydrolase; Alpha Beta Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; HAD Family Phosphatase; HAD Hydrolase Superfamily Protein
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTVKAVVFDFGGVLIDWSPEYLYRKLIPDEAERRWFLTHVCGMDWVVRQDGGQTIEEGTAERIALFPEHEALIRAFYARW HEMIGGELADGAALVDALDARGVPLFGLTNWSAQTFPYAWENFPVLRRFRDIVVSGRVKLAKPDPAIYREMHARIEPHLP GIAPHELVFIDDNAKNAAAAAALGWHGIHHTSAAATRARLRELGALG
Sequences:
>Translated_207_residues MTVKAVVFDFGGVLIDWSPEYLYRKLIPDEAERRWFLTHVCGMDWVVRQDGGQTIEEGTAERIALFPEHEALIRAFYARW HEMIGGELADGAALVDALDARGVPLFGLTNWSAQTFPYAWENFPVLRRFRDIVVSGRVKLAKPDPAIYREMHARIEPHLP GIAPHELVFIDDNAKNAAAAAALGWHGIHHTSAAATRARLRELGALG >Mature_206_residues TVKAVVFDFGGVLIDWSPEYLYRKLIPDEAERRWFLTHVCGMDWVVRQDGGQTIEEGTAERIALFPEHEALIRAFYARWH EMIGGELADGAALVDALDARGVPLFGLTNWSAQTFPYAWENFPVLRRFRDIVVSGRVKLAKPDPAIYREMHARIEPHLPG IAPHELVFIDDNAKNAAAAAALGWHGIHHTSAAATRARLRELGALG
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23150; Mature: 23018
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKAVVFDFGGVLIDWSPEYLYRKLIPDEAERRWFLTHVCGMDWVVRQDGGQTIEEGTA CCEEEEEEECCCEEEECCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCHHCCCC ERIALFPEHEALIRAFYARWHEMIGGELADGAALVDALDARGVPLFGLTNWSAQTFPYAW HHEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC ENFPVLRRFRDIVVSGRVKLAKPDPAIYREMHARIEPHLPGIAPHELVFIDDNAKNAAAA CCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHH AALGWHGIHHTSAAATRARLRELGALG HHHHHCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVKAVVFDFGGVLIDWSPEYLYRKLIPDEAERRWFLTHVCGMDWVVRQDGGQTIEEGTA CEEEEEEECCCEEEECCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCHHCCCC ERIALFPEHEALIRAFYARWHEMIGGELADGAALVDALDARGVPLFGLTNWSAQTFPYAW HHEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC ENFPVLRRFRDIVVSGRVKLAKPDPAIYREMHARIEPHLPGIAPHELVFIDDNAKNAAAA CCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHH AALGWHGIHHTSAAATRARLRELGALG HHHHHCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA