| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is recG [H]
Identifier: 53720475
GI number: 53720475
Start: 3429175
End: 3431421
Strand: Reverse
Name: recG [H]
Synonym: BPSL2867
Alternate gene names: 53720475
Gene position: 3431421-3429175 (Counterclockwise)
Preceding gene: 53720481
Following gene: 53720474
Centisome position: 84.22
GC content: 73.25
Gene sequence:
>2247_bases GTGCCGGCCGCCGCCCAGGCGGCGCGTGCGCCTCGCGCGCCCCGAGCCGCGCCGCCCGACGCACTACCCGCCGACACGCC GCCCGCCAGCGCGGCGAAGCCCGCCAAACGGGCGGCGAAGGCCGCCTCGAAAACGGTCTCGAAGGCGGCAGCGGACGCAG CCGGCGCCCAGGCGGCACCGAAGGCCGTGAAAACCGCCGACAAACTCGCGAAGCTCGGCTTGACGCGCGACATCGACCTC GTCCTGCATCTGCCGATGCGCTACGAGGACGAGACGACGCTCACGCCGATGCGCGAACTGTTGCCGGGCGAGACCGCGCA GACGGAAGGCGTCGTGTTCGACAGCGAGATCGCGTACCGGCCGCGCCGTCAGTTGCTCGTGAAGCTGCGCGACGACGACG GCGCCGAGCTCGTGCTGCGCTTCCTGAATTTCTACGGCTCGCAGGTCAAGCAGATGGCGGTCGGCCAGCGGCTGCGCGTG CGCGGCGACGTGCGCGGCGGCTTCTTCGGGCTGGAGATCGTGCATCCGACGGTGAAGACCGTCGACGAGGACGCGCCGCT GCCGCAAGCGCTGACGCCCGTCTATCCGAGCACGGCGGGCGTGTCGCAGGCGTATCTGCGCAAGGCGATCGACAATGCGC TCGCGCGCACGCCGCTGCCCGAGCTGCTGCCGCCCGAGATCGCGCGCGCGTATCTGCAGCCGCTCGACGTGCCGCCGCTC GCCGACGCGGTGCGCATGCTCCATCATCCGGGCGTCGGCGCGGACGAGGCGGCGCTCATCGACGGCACCCACCCCGCGTG GACGCGCATCAAGTTCGACGAGCTGCTCGCGCAGCAACTGTCGCTCAAGCGCGCGCACGAGGAGCGCCGCACGCGCGCCG CGCCCGCGATGCCGCGCCGCGCGCGCGACGACGGCGCGGCGCTGTCCGCGCGCCTGCACGCGGCGCTGCCGTTTGCGCTC ACGGCCGCGCAGGAGCGCGTCGTCGCGGAGATCGCGCACGACCTCACGCAGCCGCACCCGATGCAGCGCCTGCTGCAGGG CGACGTCGGCAGCGGCAAGACGGTCGTCGCGGCGCTCGCGGCCGCGCAGGCGATCGACGCCGGCTACCAGGCCGCGCTGA TGGCGCCCACCGAAATCCTCGCCGAGCAGCACGCGCGCAAGCTGCGCGGCTGGCTCGAGCCGCTCGGCGTGTCGGTCGCG TGGCTCGCCGGCAGCCTGAAGGCGAAGGACAAGCGCGCGGCGCTCGAGGCGGCCGCGCTCGGCACCGCGCAGCTCGTGAT CGGCACGCACGCGATGATTCAGGACACCGTCGAATTCGCGCGGCTCGGGCTCGTGATCGTCGACGAGCAGCACCGCTTCG GCGTCGAGCAGCGGCTCGCGCTGCGGGCGAAGGCGGCGAACGCGGCCGACGGCGCGGCGGGCTTCCAGCCGCACCAGCTG ATGATGTCGGCGACGCCGATCCCGCGCACGCTCGCGATGACGTACTACGCGGATCTCGACGTGTCGACGATCGACGAGCT GCCGCCCGGGCGCACGCCGATCCTCACGCGGCTCGTGTCGGACGCGCGGCGCGACGAGGTGATCGGCCGCGTGCGCGAGG CGGCGCTCGCGGGCCGTCAGGTGTACTGGGTGTGCCCGCTCATCGAGGAAAGCGAGACGCTGCAACTGCAGACGGCTGTC GAGACCTACGAGACGCTCGCCGCCGCGCTGCCCGAGCTGAAGGTGGGGCTCGTGCACGGCCGGCTCGCGCCTGCGGAGAA GGCGGCCGTGATGGACGCGTTCTCGCGCAACGACGTGCAATTGCTCGTCGCGACGACGGTGATCGAAGTCGGCGTCGACG TGCCGAACGCGTCGCTGATGGTGATCGAGCACGCGGAGCGCTTCGGGCTCGCGCAGCTGCACCAGCTGCGCGGGCGCGTC GGGCGCGGCACGGCCGCGTCGGTGTGCGTGCTGATGTACAGCGGGCCGCTGTCGATCGCGGGCCGCGCGCGGCTGAAGAC GATGCGCGAGACGACCGACGGCTTCGAGATCGCGCGCCGCGATCTGGAGATCCGCGGCCCCGGCGAATTCCTCGGCGCGC GCCAGTCGGGCGCGGCGATGCTGCGCTTCGCGGACCTGGAAAACGACGGCTGGCTGATCGAGCCGGCGCGCGACGCGGCC GCGCGGCTCATCGCCGCCCATCCGGAGGTCGTCGCGCAGCACCTCGCCCGCTGGCTCGGCGCGCGCGAGCAGTATCTGAA GGCCTGA
Upstream 100 bases:
>100_bases TCACGCGGCGGCCTGGGCGGAATTCGGCGCCGCGGCCGACGCCGGCGCGCGATCGGCGCCGCGCGCGACGCCGCGCGGCC GCACCGCCGACGGCCGCGCC
Downstream 100 bases:
>100_bases GCGCGGAGGCGCGACGGCCGCGCGGGCGGCGTTTCGCGCGCTTCGGACAGGCTTGTTTTCGGCGAAGGTTGGCGAATCGA CCCAAACCAGTGTATAAATT
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 748; Mature: 747
Protein sequence:
>748_residues MPAAAQAARAPRAPRAAPPDALPADTPPASAAKPAKRAAKAASKTVSKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDL VLHLPMRYEDETTLTPMRELLPGETAQTEGVVFDSEIAYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRV RGDVRGGFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPL ADAVRMLHHPGVGADEAALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFAL TAAQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVA WLAGSLKAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQL MMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAV ETYETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRV GRGTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAA ARLIAAHPEVVAQHLARWLGAREQYLKA
Sequences:
>Translated_748_residues MPAAAQAARAPRAPRAAPPDALPADTPPASAAKPAKRAAKAASKTVSKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDL VLHLPMRYEDETTLTPMRELLPGETAQTEGVVFDSEIAYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRV RGDVRGGFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPL ADAVRMLHHPGVGADEAALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFAL TAAQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVA WLAGSLKAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQL MMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAV ETYETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRV GRGTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAA ARLIAAHPEVVAQHLARWLGAREQYLKA >Mature_747_residues PAAAQAARAPRAPRAAPPDALPADTPPASAAKPAKRAAKAASKTVSKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDLV LHLPMRYEDETTLTPMRELLPGETAQTEGVVFDSEIAYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVR GDVRGGFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPLA DAVRMLHHPGVGADEAALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFALT AAQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVAW LAGSLKAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLM MSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAVE TYETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVG RGTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAAA RLIAAHPEVVAQHLARWLGAREQYLKA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=691, Percent_Identity=51.6642547033285, Blast_Score=629, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=393, Percent_Identity=38.1679389312977, Blast_Score=232, Evalue=7e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 80463; Mature: 80331
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAAQAARAPRAPRAAPPDALPADTPPASAAKPAKRAAKAASKTVSKAAADAAGAQAAP CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH KAVKTADKLAKLGLTRDIDLVLHLPMRYEDETTLTPMRELLPGETAQTEGVVFDSEIAYR HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCHHCCC PRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGLEIVHPTVKT CHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEEEEEECCHHHH VDEDAPLPQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCH ADAVRMLHHPGVGADEAALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRR HHHHHHHHCCCCCCCCCEEECCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ARDDGAALSARLHAALPFALTAAQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHH AAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVAWLAGSLKAKDKRAALEAAAL HHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHC GTAQLVIGTHAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQL CHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHH MMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQ HEECCCCCHHHEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE VYWVCPLIEESETLQLQTAVETYETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQ EEEEECEECCCCCEEHHHHHHHHHHHHHHCCHHHEEHHHCCCCCHHHHHHHHHHCCCCCE LLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLMYSGPLSIA EHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCC GRARLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAA HHHHHHHHHHCCCHHHHHHHCCEECCCHHHHCCCCCCCEEEEEEECCCCCEEEECCHHHH ARLIAAHPEVVAQHLARWLGAREQYLKA HHHHHCCHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure PAAAQAARAPRAPRAAPPDALPADTPPASAAKPAKRAAKAASKTVSKAAADAAGAQAAP CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH KAVKTADKLAKLGLTRDIDLVLHLPMRYEDETTLTPMRELLPGETAQTEGVVFDSEIAYR HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCHHCCC PRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGLEIVHPTVKT CHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEEEEEECCHHHH VDEDAPLPQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCH ADAVRMLHHPGVGADEAALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRR HHHHHHHHCCCCCCCCCEEECCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ARDDGAALSARLHAALPFALTAAQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHH AAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVAWLAGSLKAKDKRAALEAAAL HHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHC GTAQLVIGTHAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQL CHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHH MMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQ HEECCCCCHHHEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE VYWVCPLIEESETLQLQTAVETYETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQ EEEEECEECCCCCEEHHHHHHHHHHHHHHCCHHHEEHHHCCCCCHHHHHHHHHHCCCCCE LLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLMYSGPLSIA EHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCC GRARLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAA HHHHHHHHHHCCCHHHHHHHCCEECCCHHHHCCCCCCCEEEEEEECCCCCEEEECCHHHH ARLIAAHPEVVAQHLARWLGAREQYLKA HHHHHCCHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]