| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is wbiD
Identifier: 53720287
GI number: 53720287
Start: 3203353
End: 3205077
Strand: Reverse
Name: wbiD
Synonym: BPSL2677
Alternate gene names: NA
Gene position: 3205077-3203353 (Counterclockwise)
Preceding gene: 53720288
Following gene: 53720286
Centisome position: 78.66
GC content: 59.19
Gene sequence:
>1725_bases ATGAATTCTGCAACTTACCAGTTCCACTATCACGAGTATTCGGTGTACAGCAATGTCGTTGGGCTGATCACGGAGTTCGG CGCGCGCGATGGCGTGCATTTGGACATCGGCTGTGGATATGGCGCGATCGCGGAACCCGTTCGCGACCTCGGGCTCACGT ACATCGGTTTCGATGCAGACGAGGATTCGCTGCGGGATTTGCGATCGCGAGGCTTCGAGGCGAAGCGAATCGACCTGCAC CGTCTGGACGAGGTGTTCGCGGAGATTGCGGCCACGGTCAACGGTCGCAATGTGGCGTCGATTTCAATTATCGATACGCT GGAGCATATTACAAATGGGCCGGCGTTGCTCGACCGTCTGCGCGAGTTCGCCGAGCAGCGTTCGATTCTGCTCGTGGTCA GCGTGCCGAACGGCGGGCATCGCGATCTCGGTGCAAAGTTGCTCGCCGGGCATTGGGATTATACGGAGGTTGGCCTTCTC GATCACACGCACGTCATTCACCATACCGACCGCTTGCTGGCGGCAATGGCCAAGCGTGCCGGCTGGCACGAAGTGGGCGC GCGCGACTATGAGCTCGAATCCAGTGATCAGGCGTTTCCGCCGGCTCATCCGCTGTTGACCGGAAACACGGCGGCGTCAC GCTATTTGCAGCAAATCCGTCGTGCTTCGGATGCTTTCGGAACAGTGAACGAACTGGTGCGGGCGTACTTGCCGGGCGCG CGTCATGACGTTCCCCTGTTCGCCGATCCGAAAGAGGCGCGGCCGTTTCTGTCAATCGTCACGCGTACGCAAGCCAAGCG GCTTGGCAATCTGCGCGATGTCCTGCTTTGTCTCACCGCCCAGACTTGTCAGGACTTCGAAATCCTCGTCGTGACGCACA AGGTGGATGGGGAGCCGTACTATGCCGTCAGGCGGATCGTCGAAGATCTGCCGGAGTCGATTCGTAATCGTGCGCGTGTG CTTCGCTGCGATCGGGGTGGACGTACCGCGCCGCTGAATGACGGTTTTGCCGCGGCGAGAGGGCATTACGTTGCGATTCT GGACGACGATGAACTGGTTTTCGCGCACTGGGTCGAGACGTTCAAGAAGTTGAGCGAGAAGGCGGCCGGCTGTGTGTTGC GCGCGACGGCTGCCGAGCAAGACATCGTGTCGACGGGAGCCCGGCCGGATGGCGCGCTCGGATATCGGACCGTTTCGGCG ATCACGACGCCGTATCCGGCGCACTTCGACCTTTTCGAACATCTGTCACAGAATTATTCGCCGCCTGTATCGCTCGCATT TCCGCGCGTCGCTTTTCAAGAGCTGGGCATTCGATTCGACGAATCGCTGGATACGGCGGAGGACTGGGACTTCGAGATGC GCACGGCCTTCGTCTGTGGCGTCGAAAGCAGCCCGGAAATTACCGGTATCTACCGAAAGTGGCGTTCCGGCGAATCGTCG TTTTCGATCCATTCGCAGGACGAATGGCGACGCGATTACGAAAAGATCGTGACGAAGCACAACGATCAGTATCACGTGTT TCCTCCGGGCACGATCAAGCTCATCGTTGATCAGCGCAACTGGATCAAGAAGCTCGAGCACGATATCGCCGTGCTGCAGG GCGCGGCAAAACTCGATCCGTTGCGCCGGTTCTTTGTCAGGCATCCGCGTCTGTACCGGATCGTGCGGATGACCTACGAC AATTCGAAGATCGTCGCTCGGAGAATCGTTCGGCGCTTGGGGTGA
Upstream 100 bases:
>100_bases GGATCTCAAGGACGCCGGGAAACTGCCCGCCCAGATCGATCCCGGGCATCGCGTGGCGCAATTCATCGATGGCTTCTACG CGAAACACCGCTTCTAAACT
Downstream 100 bases:
>100_bases TTCGTCGATGCCGGCGGATGCGTGTCGTGTGTCACGAAGGCAGGAATAGAGATGCGGTTTGATATATCCGTCGTGGTGTA TCGAGAGACGGAGGAAACCC
Product: putative O-antigen methyl transferase
Products: NA
Alternate protein names: O-Antigen Biosynthesis Protein
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MNSATYQFHYHEYSVYSNVVGLITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDADEDSLRDLRSRGFEAKRIDLH RLDEVFAEIAATVNGRNVASISIIDTLEHITNGPALLDRLREFAEQRSILLVVSVPNGGHRDLGAKLLAGHWDYTEVGLL DHTHVIHHTDRLLAAMAKRAGWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGA RHDVPLFADPKEARPFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGEPYYAVRRIVEDLPESIRNRARV LRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVETFKKLSEKAAGCVLRATAAEQDIVSTGARPDGALGYRTVSA ITTPYPAHFDLFEHLSQNYSPPVSLAFPRVAFQELGIRFDESLDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESS FSIHSQDEWRRDYEKIVTKHNDQYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDPLRRFFVRHPRLYRIVRMTYD NSKIVARRIVRRLG
Sequences:
>Translated_574_residues MNSATYQFHYHEYSVYSNVVGLITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDADEDSLRDLRSRGFEAKRIDLH RLDEVFAEIAATVNGRNVASISIIDTLEHITNGPALLDRLREFAEQRSILLVVSVPNGGHRDLGAKLLAGHWDYTEVGLL DHTHVIHHTDRLLAAMAKRAGWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGA RHDVPLFADPKEARPFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGEPYYAVRRIVEDLPESIRNRARV LRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVETFKKLSEKAAGCVLRATAAEQDIVSTGARPDGALGYRTVSA ITTPYPAHFDLFEHLSQNYSPPVSLAFPRVAFQELGIRFDESLDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESS FSIHSQDEWRRDYEKIVTKHNDQYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDPLRRFFVRHPRLYRIVRMTYD NSKIVARRIVRRLG >Mature_574_residues MNSATYQFHYHEYSVYSNVVGLITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDADEDSLRDLRSRGFEAKRIDLH RLDEVFAEIAATVNGRNVASISIIDTLEHITNGPALLDRLREFAEQRSILLVVSVPNGGHRDLGAKLLAGHWDYTEVGLL DHTHVIHHTDRLLAAMAKRAGWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGA RHDVPLFADPKEARPFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGEPYYAVRRIVEDLPESIRNRARV LRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVETFKKLSEKAAGCVLRATAAEQDIVSTGARPDGALGYRTVSA ITTPYPAHFDLFEHLSQNYSPPVSLAFPRVAFQELGIRFDESLDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESS FSIHSQDEWRRDYEKIVTKHNDQYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDPLRRFFVRHPRLYRIVRMTYD NSKIVARRIVRRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64810; Mature: 64810
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSATYQFHYHEYSVYSNVVGLITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDAD CCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCEEEECCCC EDSLRDLRSRGFEAKRIDLHRLDEVFAEIAATVNGRNVASISIIDTLEHITNGPALLDRL HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCHHHHHHH REFAEQRSILLVVSVPNGGHRDLGAKLLAGHWDYTEVGLLDHTHVIHHTDRLLAAMAKRA HHHHHCCCEEEEEECCCCCCCCCCHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHC GWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGA CCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RHDVPLFADPKEARPFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGEPY CCCCCCCCCCHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHH YAVRRIVEDLPESIRNRARVLRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVET HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCHHHHHHHH FKKLSEKAAGCVLRATAAEQDIVSTGARPDGALGYRTVSAITTPYPAHFDLFEHLSQNYS HHHHHHHHHCEEEEEHHHHHHHHHCCCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHCCC PPVSLAFPRVAFQELGIRFDESLDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESS CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCC FSIHSQDEWRRDYEKIVTKHNDQYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDP EEECCHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHH LRRFFVRHPRLYRIVRMTYDNSKIVARRIVRRLG HHHHHHHCCHHEEEEEEEECCHHHHHHHHHHHCC >Mature Secondary Structure MNSATYQFHYHEYSVYSNVVGLITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDAD CCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCEEEECCCC EDSLRDLRSRGFEAKRIDLHRLDEVFAEIAATVNGRNVASISIIDTLEHITNGPALLDRL HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCHHHHHHH REFAEQRSILLVVSVPNGGHRDLGAKLLAGHWDYTEVGLLDHTHVIHHTDRLLAAMAKRA HHHHHCCCEEEEEECCCCCCCCCCHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHC GWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGA CCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RHDVPLFADPKEARPFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGEPY CCCCCCCCCCHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHH YAVRRIVEDLPESIRNRARVLRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVET HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCHHHHHHHH FKKLSEKAAGCVLRATAAEQDIVSTGARPDGALGYRTVSAITTPYPAHFDLFEHLSQNYS HHHHHHHHHCEEEEEHHHHHHHHHCCCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHCCC PPVSLAFPRVAFQELGIRFDESLDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESS CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCC FSIHSQDEWRRDYEKIVTKHNDQYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDP EEECCHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHH LRRFFVRHPRLYRIVRMTYDNSKIVARRIVRRLG HHHHHHHCCHHEEEEEEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA