| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is yeiW [H]
Identifier: 53720255
GI number: 53720255
Start: 3168754
End: 3169065
Strand: Reverse
Name: yeiW [H]
Synonym: BPSL2645
Alternate gene names: 53720255
Gene position: 3169065-3168754 (Counterclockwise)
Preceding gene: 53720260
Following gene: 53720254
Centisome position: 77.78
GC content: 74.36
Gene sequence:
>312_bases GTGAGTTCGGGGCGGGCGCTTGCGCATGCGTGCCGCGAGGGCTGCGGCGCGTGCTGCATCGCGCCGTCGATTTCGAGCCC GATTCCCGGCATGCCGGACGGCAAGCCGGCCGGCGTGCGCTGCGCGCAGTTGCTCGACGGCGAGCGCTGCGCGATCTTCG GCCGGCCCGAGCGCCCCGCGTGCTGCTCGGGGCTGCGGCCGAGCGACGAGATGTGCGGCGCGTCGCGCGCCGACGCGCTC GCATGGCTCGCCCGACTCGAAGCCGATACGCGGCCCGCCGCGCCGCTTGCCTCAGCAGGAGATTTAGCATGA
Upstream 100 bases:
>100_bases GATGGCACAATACGGATTCCGTGCGCGGCCGCCTGTGCCGTGCCGCTTGGCGTTTGAAGCCGCTTTCAGGATATTTGATG TGATGATTGGCGAAGTTGCC
Downstream 100 bases:
>100_bases CCGATACGAGCGCGCCCGACCGGCGCCGCTTCCTGATCGCCGCGTGCGCGGCCGCGGGCATGACCGTGTCGCTCGCCGCG TGCGCGTCGACGTTTCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSSGRALAHACREGCGACCIAPSISSPIPGMPDGKPAGVRCAQLLDGERCAIFGRPERPACCSGLRPSDEMCGASRADAL AWLARLEADTRPAAPLASAGDLA
Sequences:
>Translated_103_residues MSSGRALAHACREGCGACCIAPSISSPIPGMPDGKPAGVRCAQLLDGERCAIFGRPERPACCSGLRPSDEMCGASRADAL AWLARLEADTRPAAPLASAGDLA >Mature_102_residues SSGRALAHACREGCGACCIAPSISSPIPGMPDGKPAGVRCAQLLDGERCAIFGRPERPACCSGLRPSDEMCGASRADALA WLARLEADTRPAAPLASAGDLA
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0153 family [H]
Homologues:
Organism=Escherichia coli, GI87082060, Length=82, Percent_Identity=63.4146341463415, Blast_Score=104, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 10440; Mature: 10309
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 11.7 %Cys+Met (Translated Protein) 8.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGRALAHACREGCGACCIAPSISSPIPGMPDGKPAGVRCAQLLDGERCAIFGRPERPA CCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCH CCSGLRPSDEMCGASRADALAWLARLEADTRPAAPLASAGDLA HHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SSGRALAHACREGCGACCIAPSISSPIPGMPDGKPAGVRCAQLLDGERCAIFGRPERPA CCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCH CCSGLRPSDEMCGASRADALAWLARLEADTRPAAPLASAGDLA HHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]