Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53720254

Identifier: 53720254

GI number: 53720254

Start: 3168176

End: 3168757

Strand: Reverse

Name: 53720254

Synonym: BPSL2644

Alternate gene names: NA

Gene position: 3168757-3168176 (Counterclockwise)

Preceding gene: 53720255

Following gene: 53720253

Centisome position: 77.77

GC content: 65.64

Gene sequence:

>582_bases
ATGACCGATACGAGCGCGCCCGACCGGCGCCGCTTCCTGATCGCCGCGTGCGCGGCCGCGGGCATGACCGTGTCGCTCGC
CGCGTGCGCGTCGACGTTTCCGTTCATCCCCGATCACTACACGTTCTCGCAAGGCGACGTGCAGCGCGCGGTCGCCCGCA
AGTTTCCGTACCAGAAGACGGTCGCGCAGGTGATCGACGTCGCGCTCGCGAATCCGGTCGTCGGGCTGCTGCCGGACCAG
AACCGCGTCGCGGTGCGGCTCGACGCGCGCTTCGAGAGCCCGTTCCTGCGCGCGCCCGTCAACGGCAAGTTCACCGTGTC
GGGCCAGCTCGCGTACGATGCGCCGAGCCGCTCCGTCGTGCTGAAGGCGCCTGCCGTCGACAGCGTGAACGTCGACGGCG
ACGCGCAGTTGTATACGCAGCAGATCAGCGCGGCCGCGGGCCTGCTCGCGACCCAGTTGCTGACCAACTATCCGATCTAC
ACGTTCAAGCCGGAACAGTTGCAATTTGCCGGCGTGAATTACGAACCCGGTACAATCACAATTCTTACAAACGGCATACG
CGTGGCGATCGTCGAGAAATGA

Upstream 100 bases:

>100_bases
AGATGTGCGGCGCGTCGCGCGCCGACGCGCTCGCATGGCTCGCCCGACTCGAAGCCGATACGCGGCCCGCCGCGCCGCTT
GCCTCAGCAGGAGATTTAGC

Downstream 100 bases:

>100_bases
CATCGCGCCGCGCGCGGCCGGAGCGGCCGCGGCGGTTCCGTGGCCTCGGTTGATTCATTTCGGAAGCGGGCCACGGATGG
ACTGGATACTGATTTGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Lipoprotein

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTDTSAPDRRRFLIAACAAAGMTVSLAACASTFPFIPDHYTFSQGDVQRAVARKFPYQKTVAQVIDVALANPVVGLLPDQ
NRVAVRLDARFESPFLRAPVNGKFTVSGQLAYDAPSRSVVLKAPAVDSVNVDGDAQLYTQQISAAAGLLATQLLTNYPIY
TFKPEQLQFAGVNYEPGTITILTNGIRVAIVEK

Sequences:

>Translated_193_residues
MTDTSAPDRRRFLIAACAAAGMTVSLAACASTFPFIPDHYTFSQGDVQRAVARKFPYQKTVAQVIDVALANPVVGLLPDQ
NRVAVRLDARFESPFLRAPVNGKFTVSGQLAYDAPSRSVVLKAPAVDSVNVDGDAQLYTQQISAAAGLLATQLLTNYPIY
TFKPEQLQFAGVNYEPGTITILTNGIRVAIVEK
>Mature_192_residues
TDTSAPDRRRFLIAACAAAGMTVSLAACASTFPFIPDHYTFSQGDVQRAVARKFPYQKTVAQVIDVALANPVVGLLPDQN
RVAVRLDARFESPFLRAPVNGKFTVSGQLAYDAPSRSVVLKAPAVDSVNVDGDAQLYTQQISAAAGLLATQLLTNYPIYT
FKPEQLQFAGVNYEPGTITILTNGIRVAIVEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20765; Mature: 20634

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTSAPDRRRFLIAACAAAGMTVSLAACASTFPFIPDHYTFSQGDVQRAVARKFPYQKT
CCCCCCCCHHHHHEEEHHHCCCEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHH
VAQVIDVALANPVVGLLPDQNRVAVRLDARFESPFLRAPVNGKFTVSGQLAYDAPSRSVV
HHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEECCCCCEEEEEEEEEECCCCCEEE
LKAPAVDSVNVDGDAQLYTQQISAAAGLLATQLLTNYPIYTFKPEQLQFAGVNYEPGTIT
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCEEE
ILTNGIRVAIVEK
EEECCEEEEEEEC
>Mature Secondary Structure 
TDTSAPDRRRFLIAACAAAGMTVSLAACASTFPFIPDHYTFSQGDVQRAVARKFPYQKT
CCCCCCCHHHHHEEEHHHCCCEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHH
VAQVIDVALANPVVGLLPDQNRVAVRLDARFESPFLRAPVNGKFTVSGQLAYDAPSRSVV
HHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEECCCCCEEEEEEEEEECCCCCEEE
LKAPAVDSVNVDGDAQLYTQQISAAAGLLATQLLTNYPIYTFKPEQLQFAGVNYEPGTIT
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCEEE
ILTNGIRVAIVEK
EEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA